RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 GGTA1PQ4G0N0 100 aa15.19■□□□□ 0.02
SNX17-204ENST00000453453 XKR6Q5GH73 641 aa15.19■□□□□ 0.02
SNX17-204ENST00000453453 TTC23Q5W5X9 447 aa15.19■□□□□ 0.02
SNX17-204ENST00000453453 GTF2IRD2BQ6EKJ0 949 aa15.19■□□□□ 0.02
SNX17-204ENST00000453453 LETMD1Q6P1Q0 360 aa15.19■□□□□ 0.02
SNX17-204ENST00000453453 SUSD1Q6UWL2 747 aa15.19■□□□□ 0.02
SNX17-204ENST00000453453 GTF2IRD2Q86UP8 949 aa15.19■□□□□ 0.02
SNX17-204ENST00000453453 NAGSQ8N159 534 aa15.19■□□□□ 0.02
SNX17-204ENST00000453453 OR9I1Q8NGQ6 314 aa15.19■□□□□ 0.02
SNX17-204ENST00000453453 SLC37A2Q8TED4 501 aa15.19■□□□□ 0.02
SNX17-204ENST00000453453 AURKBQ96GD4 344 aaPredicted RBP15.19■□□□□ 0.02
SNX17-204ENST00000453453 LOXL4Q96JB6 756 aa15.19■□□□□ 0.02
SNX17-204ENST00000453453 MENTQ9BUN1 341 aa15.19■□□□□ 0.02
SNX17-204ENST00000453453 SLC29A3Q9BZD2 475 aa15.19■□□□□ 0.02
SNX17-204ENST00000453453 SRMSQ9H3Y6 488 aa15.19■□□□□ 0.02
SNX17-204ENST00000453453 XKR8Q9H6D3 395 aa15.19■□□□□ 0.02
SNX17-204ENST00000453453 TMEM165Q9HC07 324 aa15.19■□□□□ 0.02
SNX17-204ENST00000453453 SLC52A3Q9NQ40 469 aa15.19■□□□□ 0.02
SNX17-204ENST00000453453 OR6C2Q9NZP2 312 aa15.19■□□□□ 0.02
SNX17-204ENST00000453453 MAGEL2Q9UJ55 1249 aa15.19■□□□□ 0.02
SNX17-204ENST00000453453 FAM32AQ9Y421 112 aaKnown RBP15.19■□□□□ 0.02
SNX17-204ENST00000453453 CACNA1EQ15878 2313 aa15.19■□□□□ 0.02
SNX17-204ENST00000453453 VCANP13611 3396 aa15.19■□□□□ 0.02
SNX17-204ENST00000453453 SDK1Q7Z5N4 2213 aa15.18■□□□□ 0.02
SNX17-204ENST00000453453 DEAF1O75398 565 aaPredicted RBP15.18■□□□□ 0.02
SNX17-204ENST00000453453 NTRK1P04629 796 aa15.18■□□□□ 0.02
SNX17-204ENST00000453453 CAPN1P07384 714 aa15.18■□□□□ 0.02
SNX17-204ENST00000453453 TFPTP0C1Z6 253 aa15.18■□□□□ 0.02
SNX17-204ENST00000453453 TMED10P49755 219 aaKnown RBP15.18■□□□□ 0.02
SNX17-204ENST00000453453 HHEXQ03014 270 aa15.18■□□□□ 0.02
SNX17-204ENST00000453453 DAG1Q14118 895 aa15.18■□□□□ 0.02
SNX17-204ENST00000453453 LIPJQ5W064 366 aa15.18■□□□□ 0.02
SNX17-204ENST00000453453 THAP5Q7Z6K1 395 aa15.18■□□□□ 0.02
SNX17-204ENST00000453453 IGFN1Q86VF2 1251 aa15.18■□□□□ 0.02
SNX17-204ENST00000453453 AMIGO1Q86WK6 493 aa15.18■□□□□ 0.02
SNX17-204ENST00000453453 C17orf64Q86WR6 236 aa15.18■□□□□ 0.02
SNX17-204ENST00000453453 C2orf73Q8N5S3 287 aaPredicted RBP15.18■□□□□ 0.02
SNX17-204ENST00000453453 DCBLD1Q8N8Z6 715 aa15.18■□□□□ 0.02
SNX17-204ENST00000453453 L3MBTL4Q8NA19 623 aa15.18■□□□□ 0.02
SNX17-204ENST00000453453 PIK3C3Q8NEB9 887 aa15.18■□□□□ 0.02
SNX17-204ENST00000453453 TWIST2Q8WVJ9 160 aa15.18■□□□□ 0.02
SNX17-204ENST00000453453 SLC5A11Q8WWX8 675 aa15.18■□□□□ 0.02
SNX17-204ENST00000453453 PATE1Q8WXA2 126 aa15.18■□□□□ 0.02
SNX17-204ENST00000453453 VMP1Q96GC9 406 aa15.18■□□□□ 0.02
SNX17-204ENST00000453453 OR4K3Q96R72 315 aa15.18■□□□□ 0.02
SNX17-204ENST00000453453 KCNA7Q96RP8 456 aa15.18■□□□□ 0.02
SNX17-204ENST00000453453 KCTD14Q9BQ13 255 aaPredicted RBP15.18■□□□□ 0.02
SNX17-204ENST00000453453 ALG2Q9H553 416 aa15.18■□□□□ 0.02
SNX17-204ENST00000453453 LEF1Q9UJU2 399 aaPredicted RBP15.18■□□□□ 0.02
SNX17-204ENST00000453453 ZNF225Q9UK10 706 aa15.18■□□□□ 0.02
SNX17-204ENST00000453453 SLC6A14Q9UN76 642 aa15.18■□□□□ 0.02
SNX17-204ENST00000453453 ZNF232Q9UNY5 417 aa15.18■□□□□ 0.02
SNX17-204ENST00000453453 PCDHB11Q9Y5F2 797 aa15.18■□□□□ 0.02
SNX17-204ENST00000453453 KNL1Q8NG31 2342 aa15.18■□□□□ 0.02
SNX17-204ENST00000453453 FAM221BA6H8Z2 402 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 SEC24DO94855 1032 aaPredicted RBP15.17■□□□□ 0.02
SNX17-204ENST00000453453 CCNDBP1O95273 360 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 KRT6AP02538 564 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 KRT6BP04259 564 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 SYPP08247 313 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 PRR35P0CG20 571 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 NPPBP16860 134 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 EPORP19235 508 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 HNF4AP41235 474 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 KRT6CP48668 564 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 BNC1Q01954 994 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 PCDH1Q08174 1060 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 RCAN2Q14206 197 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 GPR18Q14330 331 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 NEDD8Q15843 81 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 DEFB133Q30KQ1 61 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 GALNT18Q6P9A2 607 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 TMPRSS11BQ86T26 416 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 ZC3H7AQ8IWR0 971 aaKnown RBP15.17■□□□□ 0.02
SNX17-204ENST00000453453 OR4E2Q8NGC2 313 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 FANCEQ9HB96 536 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 C11orf16Q9NQ32 467 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 USE1Q9NZ43 259 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 TAC3Q9UHF0 121 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 SNX6Q9UNH7 406 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 NAALAD2Q9Y3Q0 740 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 TIMM22Q9Y584 194 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 DNAJC15Q9Y5T4 150 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 GPC6Q9Y625 555 aaPredicted RBP15.17■□□□□ 0.02
SNX17-204ENST00000453453 PRAMEF33A0A0G2JMD5 474 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 A0A1B0GTL3 188 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 E7EQ34 232 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 CER1O95813 267 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 THRBP10828 461 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 JUPP14923 745 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 ZNF182P17025 639 aaPredicted RBP15.17■□□□□ 0.02
SNX17-204ENST00000453453 ITIH1P19827 911 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 MATN1P21941 496 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 FOXA1P55317 472 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 KCNK10P57789 538 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 LAPTM5Q13571 262 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 ATP1A4Q13733 1029 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 LPAL2Q16609 132 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 HIST2H2ACQ16777 129 aaPredicted RBP15.17■□□□□ 0.02
SNX17-204ENST00000453453 TRIM61Q5EBN2 209 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms