RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 CAPS2Q9BXY5 557 aa11.7□□□□□ -0.54
CPSF4-208ENST00000452047 PITHD1Q9GZP4 211 aaPredicted RBP11.7□□□□□ -0.54
CPSF4-208ENST00000452047 CNOT10Q9H9A5 744 aaKnown RBP11.7□□□□□ -0.54
CPSF4-208ENST00000452047 NECTIN3Q9NQS3 549 aa11.7□□□□□ -0.54
CPSF4-208ENST00000452047 PRDM9Q9NQV7 894 aa11.7□□□□□ -0.54
CPSF4-208ENST00000452047 DNAJC11Q9NVH1 559 aa11.7□□□□□ -0.54
CPSF4-208ENST00000452047 ABI3Q9P2A4 366 aa11.7□□□□□ -0.54
CPSF4-208ENST00000452047 PTBP2Q9UKA9 531 aaKnown RBP11.7□□□□□ -0.54
CPSF4-208ENST00000452047 ASB1Q9Y576 335 aa11.7□□□□□ -0.54
CPSF4-208ENST00000452047 PCDHGB6Q9Y5F9 930 aa11.7□□□□□ -0.54
CPSF4-208ENST00000452047 LRBAP50851 2863 aa11.7□□□□□ -0.54
CPSF4-208ENST00000452047 NOTCH2Q04721 2471 aa11.69□□□□□ -0.54
CPSF4-208ENST00000452047 A0A0G2JN53 185 aa11.69□□□□□ -0.54
CPSF4-208ENST00000452047 SAGE2PA6NJ88 616 aa11.69□□□□□ -0.54
CPSF4-208ENST00000452047 LRRTM2O43300 516 aa11.69□□□□□ -0.54
CPSF4-208ENST00000452047 ERI3O43414 337 aaKnown RBP11.69□□□□□ -0.54
CPSF4-208ENST00000452047 H2AFYO75367 372 aaKnown RBP11.69□□□□□ -0.54
CPSF4-208ENST00000452047 CLEC3AO75596 197 aa11.69□□□□□ -0.54
CPSF4-208ENST00000452047 STK16O75716 305 aa11.69□□□□□ -0.54
CPSF4-208ENST00000452047 RASAL1O95294 804 aa11.69□□□□□ -0.54
CPSF4-208ENST00000452047 MST1P26927 711 aa11.69□□□□□ -0.54
CPSF4-208ENST00000452047 STX2P32856 288 aa11.69□□□□□ -0.54
CPSF4-208ENST00000452047 KCNK10P57789 538 aa11.69□□□□□ -0.54
CPSF4-208ENST00000452047 BTN3A2P78410 334 aa11.69□□□□□ -0.54
CPSF4-208ENST00000452047 PMP22Q01453 160 aa11.69□□□□□ -0.54
CPSF4-208ENST00000452047 NAB1Q13506 487 aa11.69□□□□□ -0.54
CPSF4-208ENST00000452047 RUNX2Q13950 521 aa11.69□□□□□ -0.54
CPSF4-208ENST00000452047 E2F2Q14209 437 aa11.69□□□□□ -0.54
CPSF4-208ENST00000452047 EFTUD2Q15029 972 aaKnown RBP eCLIP11.69□□□□□ -0.543e-13■■■■□ 21.2
CPSF4-208ENST00000452047 PDK4Q16654 411 aa11.69□□□□□ -0.54
CPSF4-208ENST00000452047 ZNF766Q5HY98 468 aa11.69□□□□□ -0.54
CPSF4-208ENST00000452047 SCUBE1Q8IWY4 988 aa11.69□□□□□ -0.54
CPSF4-208ENST00000452047 KRT78Q8N1N4 520 aa11.69□□□□□ -0.54
CPSF4-208ENST00000452047 KIF2BQ8N4N8 673 aa11.69□□□□□ -0.54
CPSF4-208ENST00000452047 NFAM1Q8NET5 270 aaPredicted RBP11.69□□□□□ -0.54
CPSF4-208ENST00000452047 DNAJB8Q8NHS0 232 aa11.69□□□□□ -0.54
CPSF4-208ENST00000452047 PTCD3Q96EY7 689 aaKnown RBP11.69□□□□□ -0.54
CPSF4-208ENST00000452047 QRFPRQ96P65 431 aa11.69□□□□□ -0.54
CPSF4-208ENST00000452047 ZDHHC18Q9NUE0 388 aa11.69□□□□□ -0.54
CPSF4-208ENST00000452047 CD274Q9NZQ7 290 aa11.69□□□□□ -0.54
CPSF4-208ENST00000452047 ZNF490Q9ULM2 529 aaPredicted RBP11.69□□□□□ -0.54
CPSF4-208ENST00000452047 RNF112Q9ULX5 631 aa11.69□□□□□ -0.54
CPSF4-208ENST00000452047 CLDN16Q9Y5I7 305 aa11.69□□□□□ -0.54
CPSF4-208ENST00000452047 ESYT3A0FGR9 886 aa11.68□□□□□ -0.54
CPSF4-208ENST00000452047 GABRR3A8MPY1 467 aa11.68□□□□□ -0.54
CPSF4-208ENST00000452047 TGFBR3LH3BV60 316 aa11.68□□□□□ -0.54
CPSF4-208ENST00000452047 PSMD12O00232 456 aaPredicted RBP11.68□□□□□ -0.54
CPSF4-208ENST00000452047 NEURL1O76050 574 aa11.68□□□□□ -0.54
CPSF4-208ENST00000452047 CRYABP02511 175 aaKnown RBP11.68□□□□□ -0.54
CPSF4-208ENST00000452047 MYBL2P10244 700 aa11.68□□□□□ -0.54
CPSF4-208ENST00000452047 TFEBP19484 476 aa11.68□□□□□ -0.54
CPSF4-208ENST00000452047 CD96P40200 585 aa11.68□□□□□ -0.54
CPSF4-208ENST00000452047 ST13P50502 369 aaKnown RBP11.68□□□□□ -0.54
CPSF4-208ENST00000452047 TAS2R50P59544 299 aa11.68□□□□□ -0.54
CPSF4-208ENST00000452047 SLC7A5Q01650 507 aa11.68□□□□□ -0.54
CPSF4-208ENST00000452047 SRSF11Q05519 484 aaKnown RBP11.68□□□□□ -0.54
CPSF4-208ENST00000452047 DOC2AQ14183 400 aa11.68□□□□□ -0.54
CPSF4-208ENST00000452047 SLMAPQ14BN4 828 aa11.68□□□□□ -0.54
CPSF4-208ENST00000452047 OR1C1Q15619 314 aa11.68□□□□□ -0.54
CPSF4-208ENST00000452047 ISCA2Q86U28 154 aa11.68□□□□□ -0.54
CPSF4-208ENST00000452047 ARMC10Q8N2F6 343 aa11.68□□□□□ -0.54
CPSF4-208ENST00000452047 SNX31Q8N9S9 440 aa11.68□□□□□ -0.54
CPSF4-208ENST00000452047 TMEM52Q8NDY8 209 aa11.68□□□□□ -0.54
CPSF4-208ENST00000452047 OR2L5Q8NG80 312 aa11.68□□□□□ -0.54
CPSF4-208ENST00000452047 CCT6BQ92526 530 aa11.68□□□□□ -0.54
CPSF4-208ENST00000452047 SCMH1Q96GD3 660 aa11.68□□□□□ -0.54
CPSF4-208ENST00000452047 ATOH8Q96SQ7 321 aa11.68□□□□□ -0.54
CPSF4-208ENST00000452047 UTP23Q9BRU9 249 aaKnown RBP11.68□□□□□ -0.54
CPSF4-208ENST00000452047 EFCAB11Q9BUY7 163 aa11.68□□□□□ -0.54
CPSF4-208ENST00000452047 NPLQ9BXD5 320 aaPredicted RBP11.68□□□□□ -0.54
CPSF4-208ENST00000452047 HES7Q9BYE0 225 aa11.68□□□□□ -0.54
CPSF4-208ENST00000452047 REXO4Q9GZR2 422 aaKnown RBP11.68□□□□□ -0.54
CPSF4-208ENST00000452047 RHBGQ9H310 441 aa11.68□□□□□ -0.54
CPSF4-208ENST00000452047 ALG9Q9H6U8 611 aa11.68□□□□□ -0.54
CPSF4-208ENST00000452047 IGSF5Q9NSI5 407 aa11.68□□□□□ -0.54
CPSF4-208ENST00000452047 ANKRD10Q9NXR5 420 aa11.68□□□□□ -0.54
CPSF4-208ENST00000452047 MMACHCQ9Y4U1 282 aa11.68□□□□□ -0.54
CPSF4-208ENST00000452047 HMX2A2RU54 273 aa11.67□□□□□ -0.54
CPSF4-208ENST00000452047 ASPDHA6ND91 283 aa11.67□□□□□ -0.54
CPSF4-208ENST00000452047 ANKDD1BA6NHY2 528 aa11.67□□□□□ -0.54
CPSF4-208ENST00000452047 CLGNO14967 610 aa11.67□□□□□ -0.54
CPSF4-208ENST00000452047 KERAO60938 352 aa11.67□□□□□ -0.54
CPSF4-208ENST00000452047 WISP2O76076 250 aa11.67□□□□□ -0.54
CPSF4-208ENST00000452047 COL8A1P27658 744 aa11.67□□□□□ -0.54
CPSF4-208ENST00000452047 CRABP2P29373 138 aa11.67□□□□□ -0.54
CPSF4-208ENST00000452047 CASP2P42575 452 aa11.67□□□□□ -0.54
CPSF4-208ENST00000452047 HNRNPFP52597 415 aaKnown RBP11.67□□□□□ -0.54
CPSF4-208ENST00000452047 TERF2Q15554 542 aa11.67□□□□□ -0.54
CPSF4-208ENST00000452047 TBCCQ15814 346 aa11.67□□□□□ -0.54
CPSF4-208ENST00000452047 XKR6Q5GH73 641 aa11.67□□□□□ -0.54
CPSF4-208ENST00000452047 ZNF468Q5VIY5 522 aaPredicted RBP11.67□□□□□ -0.54
CPSF4-208ENST00000452047 SPINK14Q6IE38 97 aa11.67□□□□□ -0.54
CPSF4-208ENST00000452047 C8orf74Q6P047 294 aa11.67□□□□□ -0.54
CPSF4-208ENST00000452047 TRIM40Q6P9F5 258 aa11.67□□□□□ -0.54
CPSF4-208ENST00000452047 ABHD17CQ6PCB6 329 aa11.67□□□□□ -0.54
CPSF4-208ENST00000452047 GFRALQ6UXV0 394 aa11.67□□□□□ -0.54
CPSF4-208ENST00000452047 RAPH1Q70E73 1250 aa11.67□□□□□ -0.54
CPSF4-208ENST00000452047 LRRC70Q7Z2Q7 622 aa11.67□□□□□ -0.54
CPSF4-208ENST00000452047 TBC1D1Q86TI0 1168 aaPredicted RBP11.67□□□□□ -0.54
CPSF4-208ENST00000452047 RPS19BP1Q86WX3 136 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms