RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 JRKO75564 520 aa20.43■□□□□ 0.86
C9orf3-208ENST00000451893 SEC24DO94855 1032 aaPredicted RBP20.43■□□□□ 0.86
C9orf3-208ENST00000451893 KLHL2O95198 593 aa20.43■□□□□ 0.86
C9orf3-208ENST00000451893 F10P00742 488 aa20.43■□□□□ 0.86
C9orf3-208ENST00000451893 SLC35E2BP0CK96 405 aa20.43■□□□□ 0.86
C9orf3-208ENST00000451893 AGTR2P50052 363 aa20.43■□□□□ 0.86
C9orf3-208ENST00000451893 ZNF33BQ06732 778 aa20.43■□□□□ 0.86
C9orf3-208ENST00000451893 ACTN3Q08043 901 aaPredicted RBP20.43■□□□□ 0.86
C9orf3-208ENST00000451893 FAM83EQ2M2I3 478 aa20.43■□□□□ 0.86
C9orf3-208ENST00000451893 TTC19Q6DKK2 380 aaPredicted RBP20.43■□□□□ 0.86
C9orf3-208ENST00000451893 PRSS41Q7RTY9 318 aa20.43■□□□□ 0.86
C9orf3-208ENST00000451893 CPEB2Q7Z5Q1 589 aaKnown RBP20.43■□□□□ 0.86
C9orf3-208ENST00000451893 RDH11Q8TC12 318 aa20.43■□□□□ 0.86
C9orf3-208ENST00000451893 SLC5A11Q8WWX8 675 aa20.43■□□□□ 0.86
C9orf3-208ENST00000451893 FBXL8Q96CD0 374 aa20.43■□□□□ 0.86
C9orf3-208ENST00000451893 OLFM1Q99784 485 aa20.43■□□□□ 0.86
C9orf3-208ENST00000451893 RBCK1Q9BYM8 510 aa20.43■□□□□ 0.86
C9orf3-208ENST00000451893 OLAHQ9NV23 265 aa20.43■□□□□ 0.86
C9orf3-208ENST00000451893 ABI3Q9P2A4 366 aa20.43■□□□□ 0.86
C9orf3-208ENST00000451893 SLC17A7Q9P2U7 560 aa20.43■□□□□ 0.86
C9orf3-208ENST00000451893 NTNG1Q9Y2I2 539 aa20.43■□□□□ 0.86
C9orf3-208ENST00000451893 NAALAD2Q9Y3Q0 740 aa20.43■□□□□ 0.86
C9orf3-208ENST00000451893 SVILO95425 2214 aa20.42■□□□□ 0.86
C9orf3-208ENST00000451893 LOC102723996A0A087X1L8 192 aa20.42■□□□□ 0.86
C9orf3-208ENST00000451893 URADA6NGE7 173 aa20.42■□□□□ 0.86
C9orf3-208ENST00000451893 ZNF860A6NHJ4 632 aa20.42■□□□□ 0.86
C9orf3-208ENST00000451893 A8MUI8 341 aa20.42■□□□□ 0.86
C9orf3-208ENST00000451893 LCMT2O60294 686 aaKnown RBP20.42■□□□□ 0.86
C9orf3-208ENST00000451893 PLIN3O60664 434 aa20.42■□□□□ 0.86
C9orf3-208ENST00000451893 CDC123O75794 336 aaPredicted RBP20.42■□□□□ 0.86
C9orf3-208ENST00000451893 CELA2AP08217 269 aa20.42■□□□□ 0.86
C9orf3-208ENST00000451893 CYC1P08574 325 aa20.42■□□□□ 0.86
C9orf3-208ENST00000451893 ITGAMP11215 1152 aa20.42■□□□□ 0.86
C9orf3-208ENST00000451893 NPPBP16860 134 aa20.42■□□□□ 0.86
C9orf3-208ENST00000451893 SERPINB4P48594 390 aa20.42■□□□□ 0.86
C9orf3-208ENST00000451893 PGGT1BP53609 377 aa20.42■□□□□ 0.86
C9orf3-208ENST00000451893 PCOLCEQ15113 449 aa20.42■□□□□ 0.86
C9orf3-208ENST00000451893 NIPAL1Q6NVV3 410 aa20.42■□□□□ 0.86
C9orf3-208ENST00000451893 TMEM205Q6UW68 189 aa20.42■□□□□ 0.86
C9orf3-208ENST00000451893 ABHD13Q7L211 337 aa20.42■□□□□ 0.86
C9orf3-208ENST00000451893 ARHGEF39Q8N4T4 335 aa20.42■□□□□ 0.86
C9orf3-208ENST00000451893 OR56A3Q8NH54 315 aa20.42■□□□□ 0.86
C9orf3-208ENST00000451893 FAR1Q8WVX9 515 aa20.42■□□□□ 0.86
C9orf3-208ENST00000451893 SREK1Q8WXA9 508 aaKnown RBP20.42■□□□□ 0.86
C9orf3-208ENST00000451893 PEX11GQ96HA9 241 aa20.42■□□□□ 0.86
C9orf3-208ENST00000451893 SCN2AQ99250 2005 aa20.42■□□□□ 0.86
C9orf3-208ENST00000451893 IGHV3-20A0A0C4DH32 117 aa20.41■□□□□ 0.86
C9orf3-208ENST00000451893 TRBC2A0A5B9 178 aa20.41■□□□□ 0.86
C9orf3-208ENST00000451893 NPEPPSL1A6NEC2 478 aa20.41■□□□□ 0.86
C9orf3-208ENST00000451893 KLF11O14901 512 aa20.41■□□□□ 0.86
C9orf3-208ENST00000451893 TSPAN12O95859 305 aa20.41■□□□□ 0.86
C9orf3-208ENST00000451893 EDN3P14138 238 aa20.41■□□□□ 0.86
C9orf3-208ENST00000451893 ZNF37AP17032 561 aaPredicted RBP20.41■□□□□ 0.86
C9orf3-208ENST00000451893 PER3P56645 1201 aa20.41■□□□□ 0.86
C9orf3-208ENST00000451893 KLC3Q6P597 504 aa20.41■□□□□ 0.86
C9orf3-208ENST00000451893 LANCL3Q6ZV70 420 aa20.41■□□□□ 0.86
C9orf3-208ENST00000451893 TMPRSS11BQ86T26 416 aa20.41■□□□□ 0.86
C9orf3-208ENST00000451893 CEP97Q8IW35 865 aa20.41■□□□□ 0.86
C9orf3-208ENST00000451893 LRRC8CQ8TDW0 803 aa20.41■□□□□ 0.86
C9orf3-208ENST00000451893 UBXN10Q96LJ8 280 aa20.41■□□□□ 0.86
C9orf3-208ENST00000451893 ZNF317Q96PQ6 595 aaPredicted RBP20.41■□□□□ 0.86
C9orf3-208ENST00000451893 AIF1LQ9BQI0 150 aa20.41■□□□□ 0.86
C9orf3-208ENST00000451893 NSRP1Q9H0G5 558 aaKnown RBP20.41■□□□□ 0.86
C9orf3-208ENST00000451893 KCNK13Q9HB14 408 aa20.41■□□□□ 0.86
C9orf3-208ENST00000451893 NMRAL1Q9HBL8 299 aa20.41■□□□□ 0.86
C9orf3-208ENST00000451893 GPAMQ9HCL2 828 aa20.41■□□□□ 0.86
C9orf3-208ENST00000451893 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.41■□□□□ 0.86
C9orf3-208ENST00000451893 ERRFI1Q9UJM3 462 aaPredicted RBP20.41■□□□□ 0.86
C9orf3-208ENST00000451893 SLC22A7Q9Y694 548 aa20.41■□□□□ 0.86
C9orf3-208ENST00000451893 PHGDHO43175 533 aaKnown RBP20.4■□□□□ 0.86
C9orf3-208ENST00000451893 WISP3O95389 354 aaPredicted RBP20.4■□□□□ 0.86
C9orf3-208ENST00000451893 PROCP04070 461 aa20.4■□□□□ 0.86
C9orf3-208ENST00000451893 RBP1P09455 135 aa20.4■□□□□ 0.86
C9orf3-208ENST00000451893 LTA4HP09960 611 aaKnown RBP20.4■□□□□ 0.86
C9orf3-208ENST00000451893 IL10P22301 178 aa20.4■□□□□ 0.86
C9orf3-208ENST00000451893 JAK1P23458 1154 aa20.4■□□□□ 0.86
C9orf3-208ENST00000451893 SOX11P35716 441 aa20.4■□□□□ 0.86
C9orf3-208ENST00000451893 PRKAA2P54646 552 aa20.4■□□□□ 0.86
C9orf3-208ENST00000451893 RBBP5Q15291 538 aaKnown RBP20.4■□□□□ 0.86
C9orf3-208ENST00000451893 NSDHLQ15738 373 aa20.4■□□□□ 0.86
C9orf3-208ENST00000451893 CATSPEREQ5SY80 951 aa20.4■□□□□ 0.86
C9orf3-208ENST00000451893 ARMC2Q8NEN0 867 aa20.4■□□□□ 0.86
C9orf3-208ENST00000451893 ABHD11Q8NFV4 315 aa20.4■□□□□ 0.86
C9orf3-208ENST00000451893 HAS2Q92819 552 aa20.4■□□□□ 0.86
C9orf3-208ENST00000451893 TM4SF19Q96DZ7 209 aa20.4■□□□□ 0.86
C9orf3-208ENST00000451893 STMN3Q9NZ72 180 aa20.4■□□□□ 0.86
C9orf3-208ENST00000451893 TMEM216Q9P0N5 145 aa20.4■□□□□ 0.86
C9orf3-208ENST00000451893 OSGIN2Q9Y236 505 aa20.4■□□□□ 0.86
C9orf3-208ENST00000451893 KCNE2Q9Y6J6 123 aa20.4■□□□□ 0.86
C9orf3-208ENST00000451893 PRRC2CQ9Y520 2896 aaKnown RBP20.4■□□□□ 0.86
C9orf3-208ENST00000451893 HIVEP3Q5T1R4 2406 aa20.39■□□□□ 0.86
C9orf3-208ENST00000451893 ZGRF1Q86YA3 2104 aa20.39■□□□□ 0.86
C9orf3-208ENST00000451893 CPAMD8Q8IZJ3 1885 aa20.39■□□□□ 0.86
C9orf3-208ENST00000451893 A0A1W2PQ72 361 aa20.39■□□□□ 0.85
C9orf3-208ENST00000451893 PSMD12O00232 456 aaPredicted RBP20.39■□□□□ 0.85
C9orf3-208ENST00000451893 WDPCPO95876 746 aa20.39■□□□□ 0.85
C9orf3-208ENST00000451893 FAM107AO95990 144 aa20.39■□□□□ 0.85
C9orf3-208ENST00000451893 BPGMP07738 259 aa20.39■□□□□ 0.85
C9orf3-208ENST00000451893 ALOX12P18054 663 aa20.39■□□□□ 0.85
C9orf3-208ENST00000451893 TAC1P20366 129 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms