RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 C3orf18Q9UK00 162 aa14.17□□□□□ -0.14
SF1-211ENST00000448404 BAG5Q9UL15 447 aa14.17□□□□□ -0.14
SF1-211ENST00000448404 PLPP1O14494 284 aa14.16□□□□□ -0.14
SF1-211ENST00000448404 LCMT2O60294 686 aaKnown RBP14.16□□□□□ -0.14
SF1-211ENST00000448404 HPCAL1P37235 193 aa14.16□□□□□ -0.14
SF1-211ENST00000448404 MAGEA2P43356 314 aa14.16□□□□□ -0.14
SF1-211ENST00000448404 SNRPNP63162 240 aaKnown RBP14.16□□□□□ -0.14
SF1-211ENST00000448404 AQP6Q13520 282 aa14.16□□□□□ -0.14
SF1-211ENST00000448404 ZNF750Q32MQ0 723 aa14.16□□□□□ -0.14
SF1-211ENST00000448404 ZNF691Q5VV52 312 aa14.16□□□□□ -0.14
SF1-211ENST00000448404 TTC23Q5W5X9 447 aa14.16□□□□□ -0.14
SF1-211ENST00000448404 PARM1Q6UWI2 310 aa14.16□□□□□ -0.14
SF1-211ENST00000448404 CBLL1Q75N03 491 aa14.16□□□□□ -0.14
SF1-211ENST00000448404 SNX29P2Q8IUI4 249 aa14.16□□□□□ -0.14
SF1-211ENST00000448404 CHCHD4Q8N4Q1 142 aa14.16□□□□□ -0.14
SF1-211ENST00000448404 LINC01555Q8NAE3 123 aa14.16□□□□□ -0.14
SF1-211ENST00000448404 OR2L2Q8NH16 312 aa14.16□□□□□ -0.14
SF1-211ENST00000448404 HERVK_113Q902F9 699 aa14.16□□□□□ -0.14
SF1-211ENST00000448404 C7orf34Q96L11 122 aa14.16□□□□□ -0.14
SF1-211ENST00000448404 MKRN2Q9H000 416 aaKnown RBP14.16□□□□□ -0.14
SF1-211ENST00000448404 SYNPO2LQ9H987 977 aa14.16□□□□□ -0.14
SF1-211ENST00000448404 TAAR2Q9P1P5 351 aa14.16□□□□□ -0.14
SF1-211ENST00000448404 RAB23Q9ULC3 237 aa14.16□□□□□ -0.14
SF1-211ENST00000448404 DOCK8Q8NF50 2099 aa14.16□□□□□ -0.14
SF1-211ENST00000448404 SCN2AQ99250 2005 aa14.16□□□□□ -0.14
SF1-211ENST00000448404 UGDHO60701 494 aa14.16□□□□□ -0.14
SF1-211ENST00000448404 ANGPTL1O95841 491 aa14.16□□□□□ -0.14
SF1-211ENST00000448404 FADS2O95864 444 aaKnown RBP14.16□□□□□ -0.14
SF1-211ENST00000448404 HTR1BP28222 390 aa14.16□□□□□ -0.14
SF1-211ENST00000448404 CHI3L1P36222 383 aaPredicted RBP14.16□□□□□ -0.14
SF1-211ENST00000448404 PHEXP78562 749 aa14.16□□□□□ -0.14
SF1-211ENST00000448404 TFF2Q03403 129 aa14.16□□□□□ -0.14
SF1-211ENST00000448404 BROXQ5VW32 411 aa14.16□□□□□ -0.14
SF1-211ENST00000448404 PNCKQ6P2M8 343 aa14.16□□□□□ -0.14
SF1-211ENST00000448404 SHQ1Q6PI26 577 aaKnown RBP14.16□□□□□ -0.14
SF1-211ENST00000448404 NRSN1Q8IZ57 195 aa14.16□□□□□ -0.14
SF1-211ENST00000448404 SVOPLQ8N434 492 aa14.16□□□□□ -0.14
SF1-211ENST00000448404 HDDC3Q8N4P3 179 aa14.16□□□□□ -0.14
SF1-211ENST00000448404 TTC29Q8NA56 475 aaPredicted RBP14.16□□□□□ -0.14
SF1-211ENST00000448404 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.16□□□□□ -0.141e-8■□□□□ 10.2
SF1-211ENST00000448404 EXOSC8Q96B26 276 aaKnown RBP14.16□□□□□ -0.14
SF1-211ENST00000448404 PORP16435 677 aaPredicted RBP14.15□□□□□ -0.14
SF1-211ENST00000448404 CDH12P55289 794 aa14.15□□□□□ -0.14
SF1-211ENST00000448404 ELP6Q0PNE2 266 aa14.15□□□□□ -0.14
SF1-211ENST00000448404 CAMK2GQ13555 558 aaPredicted RBP14.15□□□□□ -0.14
SF1-211ENST00000448404 SPCS2Q15005 226 aa14.15□□□□□ -0.14
SF1-211ENST00000448404 BCL7AQ4VC05 210 aa14.15□□□□□ -0.14
SF1-211ENST00000448404 Q6ZNX1 250 aa14.15□□□□□ -0.14
SF1-211ENST00000448404 FRMD1Q8N878 549 aa14.15□□□□□ -0.14
SF1-211ENST00000448404 OR13F1Q8NGS4 319 aa14.15□□□□□ -0.14
SF1-211ENST00000448404 CXorf36Q9H7Y0 433 aa14.15□□□□□ -0.14
SF1-211ENST00000448404 BRF2Q9HAW0 419 aa14.15□□□□□ -0.14
SF1-211ENST00000448404 TEX10Q9NXF1 929 aaPredicted RBP14.15□□□□□ -0.14
SF1-211ENST00000448404 NFKBIL1Q9UBC1 381 aaPredicted RBP14.15□□□□□ -0.14
SF1-211ENST00000448404 GMPPBQ9Y5P6 360 aa14.15□□□□□ -0.14
SF1-211ENST00000448404 MYO10Q9HD67 2058 aa14.15□□□□□ -0.14
SF1-211ENST00000448404 SH3PXD2BA1X283 911 aa14.15□□□□□ -0.14
SF1-211ENST00000448404 NPIPB8E9PQR5 432 aa14.15□□□□□ -0.14
SF1-211ENST00000448404 SUV39H1O43463 412 aa14.15□□□□□ -0.14
SF1-211ENST00000448404 PRAMEF10O60809 474 aa14.15□□□□□ -0.14
SF1-211ENST00000448404 CD6P30203 668 aa14.15□□□□□ -0.14
SF1-211ENST00000448404 MASP1P48740 699 aa14.15□□□□□ -0.14
SF1-211ENST00000448404 PRIM2P49643 509 aa14.15□□□□□ -0.14
SF1-211ENST00000448404 GP2P55259 537 aaKnown RBP14.15□□□□□ -0.14
SF1-211ENST00000448404 SPIN4Q56A73 249 aa14.15□□□□□ -0.14
SF1-211ENST00000448404 TMEM236Q5W0B7 351 aa14.15□□□□□ -0.14
SF1-211ENST00000448404 EIF3MQ7L2H7 374 aaKnown RBP14.15□□□□□ -0.14
SF1-211ENST00000448404 TMIEQ8NEW7 156 aa14.15□□□□□ -0.14
SF1-211ENST00000448404 ADAMTS16Q8TE57 1224 aa14.15□□□□□ -0.14
SF1-211ENST00000448404 WFIKKN2Q8TEU8 576 aa14.15□□□□□ -0.14
SF1-211ENST00000448404 DOK4Q8TEW6 326 aa14.15□□□□□ -0.14
SF1-211ENST00000448404 COQ8BQ96D53 544 aa14.15□□□□□ -0.14
SF1-211ENST00000448404 THAP11Q96EK4 314 aa14.15□□□□□ -0.14
SF1-211ENST00000448404 FCRL4Q96PJ5 515 aa14.15□□□□□ -0.14
SF1-211ENST00000448404 FEVQ99581 238 aa14.15□□□□□ -0.14
SF1-211ENST00000448404 NIPSNAP1Q9BPW8 284 aa14.15□□□□□ -0.14
SF1-211ENST00000448404 SLX1AQ9BQ83 275 aa14.15□□□□□ -0.14
SF1-211ENST00000448404 ALOXE3Q9BYJ1 711 aa14.15□□□□□ -0.14
SF1-211ENST00000448404 MIEF1Q9NQG6 463 aa14.15□□□□□ -0.14
SF1-211ENST00000448404 KRT84Q9NSB2 600 aa14.15□□□□□ -0.14
SF1-211ENST00000448404 NDUFAF4Q9P032 175 aa14.15□□□□□ -0.14
SF1-211ENST00000448404 STON1Q9Y6Q2 735 aa14.15□□□□□ -0.14
SF1-211ENST00000448404 QSOX1O00391 747 aa14.14□□□□□ -0.15
SF1-211ENST00000448404 SLC31A1O15431 190 aa14.14□□□□□ -0.15
SF1-211ENST00000448404 B4GALT2O60909 372 aa14.14□□□□□ -0.15
SF1-211ENST00000448404 ABCB7O75027 752 aa14.14□□□□□ -0.15
SF1-211ENST00000448404 GDI1P31150 447 aa14.14□□□□□ -0.15
SF1-211ENST00000448404 EMX1Q04741 257 aaPredicted RBP14.14□□□□□ -0.15
SF1-211ENST00000448404 LRRC74AQ0VAA2 488 aa14.14□□□□□ -0.15
SF1-211ENST00000448404 RUNX3Q13761 415 aa14.14□□□□□ -0.15
SF1-211ENST00000448404 SHHQ15465 462 aa14.14□□□□□ -0.15
SF1-211ENST00000448404 DUSP7Q16829 419 aa14.14□□□□□ -0.15
SF1-211ENST00000448404 AGBL4Q5VU57 503 aa14.14□□□□□ -0.15
SF1-211ENST00000448404 TTC23LQ6PF05 361 aa14.14□□□□□ -0.15
SF1-211ENST00000448404 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.14□□□□□ -0.15
SF1-211ENST00000448404 ZNF557Q8N988 423 aaPredicted RBP14.14□□□□□ -0.15
SF1-211ENST00000448404 ABHD8Q96I13 439 aa14.14□□□□□ -0.15
SF1-211ENST00000448404 MYADMQ96S97 322 aa14.14□□□□□ -0.15
SF1-211ENST00000448404 YIPF4Q9BSR8 244 aa14.14□□□□□ -0.15
SF1-211ENST00000448404 FUNDC2Q9BWH2 189 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms