RNA–Protein interactions for RNA: ENST00000448301.6

CTSS-202, Transcript of cathepsin S, humanhuman

TSL 2 BASIC

Gene CTSS, Length 1,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-202ENST00000448301 SAP18O00422 153 aaKnown RBP13.3□□□□□ -0.28
CTSS-202ENST00000448301 PLPP1O14494 284 aa13.3□□□□□ -0.28
CTSS-202ENST00000448301 RDH16O75452 317 aa13.3□□□□□ -0.28
CTSS-202ENST00000448301 B3GALT4O96024 378 aa13.3□□□□□ -0.28
CTSS-202ENST00000448301 C1QTNF9P0C862 333 aa13.3□□□□□ -0.28
CTSS-202ENST00000448301 RPL14P50914 215 aaKnown RBP13.3□□□□□ -0.28
CTSS-202ENST00000448301 MTTPP55157 894 aa13.3□□□□□ -0.28
CTSS-202ENST00000448301 CLN3Q13286 438 aa13.3□□□□□ -0.28
CTSS-202ENST00000448301 LCN10Q6JVE6 187 aa13.3□□□□□ -0.28
CTSS-202ENST00000448301 FAM199XQ6PEV8 388 aaPredicted RBP13.3□□□□□ -0.28
CTSS-202ENST00000448301 FAM198BQ6UWH4 519 aa13.3□□□□□ -0.28
CTSS-202ENST00000448301 RGS9BPQ6ZS82 235 aa13.3□□□□□ -0.28
CTSS-202ENST00000448301 IL22RA1Q8N6P7 574 aa13.3□□□□□ -0.28
CTSS-202ENST00000448301 AMER3Q8N944 861 aa13.3□□□□□ -0.28
CTSS-202ENST00000448301 CT55Q8WUE5 264 aa13.3□□□□□ -0.28
CTSS-202ENST00000448301 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.3□□□□□ -0.28
CTSS-202ENST00000448301 KCNE4Q8WWG9 221 aa13.3□□□□□ -0.28
CTSS-202ENST00000448301 COL26A1Q96A83 441 aa13.3□□□□□ -0.28
CTSS-202ENST00000448301 C7orf26Q96N11 449 aa13.3□□□□□ -0.28
CTSS-202ENST00000448301 SERINC2Q96SA4 455 aa13.3□□□□□ -0.28
CTSS-202ENST00000448301 NPLQ9BXD5 320 aaPredicted RBP13.3□□□□□ -0.28
CTSS-202ENST00000448301 ZNF717Q9BY31 904 aaPredicted RBP13.3□□□□□ -0.28
CTSS-202ENST00000448301 SLC26A1Q9H2B4 701 aa13.3□□□□□ -0.28
CTSS-202ENST00000448301 TUBB1Q9H4B7 451 aa13.3□□□□□ -0.28
CTSS-202ENST00000448301 COPS7BQ9H9Q2 264 aaPredicted RBP13.3□□□□□ -0.28
CTSS-202ENST00000448301 SLC22A11Q9NSA0 550 aa13.3□□□□□ -0.28
CTSS-202ENST00000448301 AHSPQ9NZD4 102 aa13.3□□□□□ -0.28
CTSS-202ENST00000448301 IFT80Q9P2H3 777 aaPredicted RBP13.3□□□□□ -0.28
CTSS-202ENST00000448301 VPS29Q9UBQ0 182 aa13.3□□□□□ -0.28
CTSS-202ENST00000448301 MAP4K5Q9Y4K4 846 aa13.3□□□□□ -0.28
CTSS-202ENST00000448301 MAU2Q9Y6X3 613 aa13.3□□□□□ -0.28
CTSS-202ENST00000448301 CCDC88CQ9P219 2028 aa13.3□□□□□ -0.28
CTSS-202ENST00000448301 IGLV3-12A0A075B6K2 115 aa13.29□□□□□ -0.28
CTSS-202ENST00000448301 A0A0G2JN53 185 aa13.29□□□□□ -0.28
CTSS-202ENST00000448301 TMEM8BA6NDV4 472 aa13.29□□□□□ -0.28
CTSS-202ENST00000448301 C21orf140B9A014 251 aa13.29□□□□□ -0.28
CTSS-202ENST00000448301 NPIPB8E9PQR5 432 aa13.29□□□□□ -0.28
CTSS-202ENST00000448301 SLC28A1O00337 649 aa13.29□□□□□ -0.28
CTSS-202ENST00000448301 RTCAO00442 366 aaKnown RBP13.29□□□□□ -0.28
CTSS-202ENST00000448301 TERTO14746 1132 aaKnown RBP13.29□□□□□ -0.28
CTSS-202ENST00000448301 RSL1D1O76021 490 aaKnown RBP13.29□□□□□ -0.28
CTSS-202ENST00000448301 ALBP02768 609 aa13.29□□□□□ -0.28
CTSS-202ENST00000448301 CD63P08962 238 aa13.29□□□□□ -0.28
CTSS-202ENST00000448301 RAB40ALP0C0E4 278 aa13.29□□□□□ -0.28
CTSS-202ENST00000448301 HIST1H1TP22492 207 aaPredicted RBP13.29□□□□□ -0.28
CTSS-202ENST00000448301 PRPH2P23942 346 aa13.29□□□□□ -0.28
CTSS-202ENST00000448301 SSR2P43308 183 aa13.29□□□□□ -0.28
CTSS-202ENST00000448301 BTN3A2P78410 334 aa13.29□□□□□ -0.28
CTSS-202ENST00000448301 TBL3Q12788 808 aaKnown RBP13.29□□□□□ -0.28
CTSS-202ENST00000448301 SLC9A5Q14940 896 aa13.29□□□□□ -0.28
CTSS-202ENST00000448301 NCF4Q15080 339 aa13.29□□□□□ -0.28
CTSS-202ENST00000448301 TGIF1Q15583 401 aa13.29□□□□□ -0.28
CTSS-202ENST00000448301 IMPG1Q17R60 797 aa13.29□□□□□ -0.28
CTSS-202ENST00000448301 AP5B1Q2VPB7 878 aa13.29□□□□□ -0.28
CTSS-202ENST00000448301 OR4C11Q6IEV9 310 aa13.29□□□□□ -0.28
CTSS-202ENST00000448301 MRPL14Q6P1L8 145 aaKnown RBP13.29□□□□□ -0.28
CTSS-202ENST00000448301 SCIMPQ6UWF3 145 aa13.29□□□□□ -0.28
CTSS-202ENST00000448301 ZNF793Q6ZN11 406 aa13.29□□□□□ -0.28
CTSS-202ENST00000448301 OVCH1Q7RTY7 1134 aa13.29□□□□□ -0.28
CTSS-202ENST00000448301 NUDT13Q86X67 352 aa13.29□□□□□ -0.28
CTSS-202ENST00000448301 METTL4Q8N3J2 472 aa13.29□□□□□ -0.28
CTSS-202ENST00000448301 ZCCHC7Q8N3Z6 543 aaKnown RBP13.29□□□□□ -0.28
CTSS-202ENST00000448301 CCT7Q99832 543 aa13.29□□□□□ -0.28
CTSS-202ENST00000448301 DPH1Q9BZG8 443 aa13.29□□□□□ -0.28
CTSS-202ENST00000448301 GPN3Q9UHW5 284 aaPredicted RBP13.29□□□□□ -0.28
CTSS-202ENST00000448301 CROTQ9UKG9 612 aa13.29□□□□□ -0.28
CTSS-202ENST00000448301 CCL27Q9Y4X3 112 aa13.29□□□□□ -0.28
CTSS-202ENST00000448301 LOC101059948A0A1B0GTJ6 334 aa13.28□□□□□ -0.28
CTSS-202ENST00000448301 ZNF860A6NHJ4 632 aa13.28□□□□□ -0.28
CTSS-202ENST00000448301 PIP5K1BO14986 540 aa13.28□□□□□ -0.28
CTSS-202ENST00000448301 RGS14O43566 566 aa13.28□□□□□ -0.28
CTSS-202ENST00000448301 B3GALT2O43825 422 aa13.28□□□□□ -0.28
CTSS-202ENST00000448301 TCN2P20062 427 aa13.28□□□□□ -0.28
CTSS-202ENST00000448301 ATP5A1P25705 553 aaKnown RBP13.28□□□□□ -0.28
CTSS-202ENST00000448301 CERS1P27544 350 aa13.28□□□□□ -0.28
CTSS-202ENST00000448301 BSGP35613 385 aa13.28□□□□□ -0.28
CTSS-202ENST00000448301 DLSTP36957 453 aa13.28□□□□□ -0.28
CTSS-202ENST00000448301 MAT1AQ00266 395 aaKnown RBP13.28□□□□□ -0.28
CTSS-202ENST00000448301 HMGCS1Q01581 520 aa13.28□□□□□ -0.28
CTSS-202ENST00000448301 DNASE1L3Q13609 305 aa13.28□□□□□ -0.28
CTSS-202ENST00000448301 SPIN4Q56A73 249 aa13.28□□□□□ -0.28
CTSS-202ENST00000448301 XKR7Q5GH72 579 aa13.28□□□□□ -0.28
CTSS-202ENST00000448301 DDIASQ8IXT1 998 aa13.28□□□□□ -0.28
CTSS-202ENST00000448301 ACOT4Q8N9L9 421 aa13.28□□□□□ -0.28
CTSS-202ENST00000448301 OR5T3Q8NGG3 340 aa13.28□□□□□ -0.28
CTSS-202ENST00000448301 METTL2AQ96IZ6 378 aaKnown RBP13.28□□□□□ -0.28
CTSS-202ENST00000448301 SORBS1Q9BX66 1292 aaKnown RBP13.28□□□□□ -0.28
CTSS-202ENST00000448301 GPR87Q9BY21 358 aa13.28□□□□□ -0.28
CTSS-202ENST00000448301 MRPL1Q9BYD6 325 aaKnown RBP13.28□□□□□ -0.28
CTSS-202ENST00000448301 DDX31Q9H8H2 851 aaKnown RBP13.28□□□□□ -0.28
CTSS-202ENST00000448301 WDR54Q9H977 334 aa13.28□□□□□ -0.28
CTSS-202ENST00000448301 MKKSQ9NPJ1 570 aaPredicted RBP13.28□□□□□ -0.28
CTSS-202ENST00000448301 PFDN4Q9NQP4 134 aa13.28□□□□□ -0.28
CTSS-202ENST00000448301 PNPOQ9NVS9 261 aa13.28□□□□□ -0.28
CTSS-202ENST00000448301 ZNF282Q9UDV7 671 aaPredicted RBP13.28□□□□□ -0.28
CTSS-202ENST00000448301 ADAM29Q9UKF5 820 aa13.28□□□□□ -0.28
CTSS-202ENST00000448301 PTGDR2Q9Y5Y4 395 aa13.28□□□□□ -0.28
CTSS-202ENST00000448301 CEP295Q9C0D2 2601 aa13.28□□□□□ -0.28
CTSS-202ENST00000448301 FRYQ5TBA9 3013 aa13.27□□□□□ -0.28
CTSS-202ENST00000448301 VSTM2BA6NLU5 285 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms