RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 SP110Q9HB58 689 aa18.47■□□□□ 0.55
HMGA1-205ENST00000447654 HPF1Q9NWY4 346 aa18.47■□□□□ 0.55
HMGA1-205ENST00000447654 SDHAF2Q9NX18 166 aa18.47■□□□□ 0.55
HMGA1-205ENST00000447654 SSR3Q9UNL2 185 aa18.47■□□□□ 0.55
HMGA1-205ENST00000447654 LAMA2P24043 3122 aaKnown RBP18.47■□□□□ 0.55
HMGA1-205ENST00000447654 C7orf66A4D0T2 115 aa18.47■□□□□ 0.55
HMGA1-205ENST00000447654 SUPT3HB4E1H0 165 aa18.47■□□□□ 0.55
HMGA1-205ENST00000447654 INPPL1O15357 1258 aa18.47■□□□□ 0.55
HMGA1-205ENST00000447654 OLFM2O95897 454 aa18.47■□□□□ 0.55
HMGA1-205ENST00000447654 CYP17A1P05093 508 aa18.47■□□□□ 0.55
HMGA1-205ENST00000447654 TUSC1Q2TAM9 212 aa18.47■□□□□ 0.55
HMGA1-205ENST00000447654 LRIF1Q5T3J3 769 aa18.47■□□□□ 0.55
HMGA1-205ENST00000447654 ZNF704Q6ZNC4 412 aaPredicted RBP18.47■□□□□ 0.55
HMGA1-205ENST00000447654 UTP15Q8TED0 518 aaKnown RBP18.47■□□□□ 0.55
HMGA1-205ENST00000447654 LINC00052Q96N35 136 aa18.47■□□□□ 0.55
HMGA1-205ENST00000447654 C12orf57Q99622 126 aa18.47■□□□□ 0.55
HMGA1-205ENST00000447654 TRPM5Q9NZQ8 1165 aa18.47■□□□□ 0.55
HMGA1-205ENST00000447654 PCTPQ9UKL6 214 aa18.47■□□□□ 0.55
HMGA1-205ENST00000447654 CLCA3PQ9Y6N3 262 aa18.47■□□□□ 0.55
HMGA1-205ENST00000447654 MKI67P46013 3256 aaKnown RBP18.46■□□□□ 0.55
HMGA1-205ENST00000447654 LALBAP00709 142 aa18.46■□□□□ 0.55
HMGA1-205ENST00000447654 FHP07954 510 aa18.46■□□□□ 0.55
HMGA1-205ENST00000447654 STOMP27105 288 aa18.46■□□□□ 0.55
HMGA1-205ENST00000447654 SDC2P34741 201 aa18.46■□□□□ 0.55
HMGA1-205ENST00000447654 MAN2A2P49641 1150 aa18.46■□□□□ 0.55
HMGA1-205ENST00000447654 DAOAP59103 153 aa18.46■□□□□ 0.55
HMGA1-205ENST00000447654 ALDH6A1Q02252 535 aaKnown RBP18.46■□□□□ 0.55
HMGA1-205ENST00000447654 KCNA10Q16322 511 aa18.46■□□□□ 0.55
HMGA1-205ENST00000447654 CD276Q5ZPR3 534 aa18.46■□□□□ 0.55
HMGA1-205ENST00000447654 OR9Q1Q8NGQ5 310 aa18.46■□□□□ 0.55
HMGA1-205ENST00000447654 SPATA22Q8NHS9 363 aa18.46■□□□□ 0.55
HMGA1-205ENST00000447654 INTS12Q96CB8 462 aaKnown RBP18.46■□□□□ 0.55
HMGA1-205ENST00000447654 PPP3R2Q96LZ3 170 aa18.46■□□□□ 0.55
HMGA1-205ENST00000447654 TMEM43Q9BTV4 400 aa18.46■□□□□ 0.55
HMGA1-205ENST00000447654 PPP1R3EQ9H7J1 279 aa18.46■□□□□ 0.55
HMGA1-205ENST00000447654 ZNF226Q9NYT6 803 aa18.46■□□□□ 0.55
HMGA1-205ENST00000447654 ZNF225Q9UK10 706 aa18.46■□□□□ 0.55
HMGA1-205ENST00000447654 MRPS7Q9Y2R9 242 aaKnown RBP18.46■□□□□ 0.55
HMGA1-205ENST00000447654 AP1M2Q9Y6Q5 423 aa18.46■□□□□ 0.55
HMGA1-205ENST00000447654 A8MVJ9 347 aa18.45■□□□□ 0.54
HMGA1-205ENST00000447654 GFRA2O00451 464 aa18.45■□□□□ 0.54
HMGA1-205ENST00000447654 PRAMEF1O95521 474 aa18.45■□□□□ 0.54
HMGA1-205ENST00000447654 ESR1P03372 595 aa18.45■□□□□ 0.54
HMGA1-205ENST00000447654 PLAG1Q6DJT9 500 aa18.45■□□□□ 0.54
HMGA1-205ENST00000447654 GPR153Q6NV75 609 aa18.45■□□□□ 0.54
HMGA1-205ENST00000447654 SLC34A3Q8N130 599 aa18.45■□□□□ 0.54
HMGA1-205ENST00000447654 Q8N402 240 aa18.45■□□□□ 0.54
HMGA1-205ENST00000447654 RYBPQ8N488 228 aaPredicted RBP18.45■□□□□ 0.54
HMGA1-205ENST00000447654 SLAIN1Q8ND83 568 aa18.45■□□□□ 0.54
HMGA1-205ENST00000447654 B3GNT7Q8NFL0 401 aa18.45■□□□□ 0.54
HMGA1-205ENST00000447654 EDEM1Q92611 657 aa18.45■□□□□ 0.54
HMGA1-205ENST00000447654 PRR14Q9BWN1 585 aa18.45■□□□□ 0.54
HMGA1-205ENST00000447654 FSD1LQ9BXM9 530 aa18.45■□□□□ 0.54
HMGA1-205ENST00000447654 AMBNQ9NP70 447 aa18.45■□□□□ 0.54
HMGA1-205ENST00000447654 NDUFB11Q9NX14 153 aa18.45■□□□□ 0.54
HMGA1-205ENST00000447654 RNF112Q9ULX5 631 aa18.45■□□□□ 0.54
HMGA1-205ENST00000447654 SNX10Q9Y5X0 201 aa18.45■□□□□ 0.54
HMGA1-205ENST00000447654 TTC3P53804 2025 aa18.45■□□□□ 0.54
HMGA1-205ENST00000447654 NUP205Q92621 2012 aa18.45■□□□□ 0.54
HMGA1-205ENST00000447654 SHROOM3Q8TF72 1996 aa18.45■□□□□ 0.54
HMGA1-205ENST00000447654 A8MXK9 166 aa18.45■□□□□ 0.54
HMGA1-205ENST00000447654 BTN3A1O00481 513 aa18.45■□□□□ 0.54
HMGA1-205ENST00000447654 SCAMP3O14828 347 aaKnown RBP18.45■□□□□ 0.54
HMGA1-205ENST00000447654 SEPT4O43236 478 aa18.45■□□□□ 0.54
HMGA1-205ENST00000447654 ELNP15502 786 aa18.45■□□□□ 0.54
HMGA1-205ENST00000447654 EPHA4P54764 986 aa18.45■□□□□ 0.54
HMGA1-205ENST00000447654 PUDPQ08623 228 aa18.45■□□□□ 0.54
HMGA1-205ENST00000447654 RAB41Q5JT25 222 aa18.45■□□□□ 0.54
HMGA1-205ENST00000447654 NADSYN1Q6IA69 706 aa18.45■□□□□ 0.54
HMGA1-205ENST00000447654 MRPL10Q7Z7H8 261 aaKnown RBP18.45■□□□□ 0.54
HMGA1-205ENST00000447654 PIM3Q86V86 326 aa18.45■□□□□ 0.54
HMGA1-205ENST00000447654 DCBLD1Q8N8Z6 715 aa18.45■□□□□ 0.54
HMGA1-205ENST00000447654 PHF21AQ96BD5 680 aa18.45■□□□□ 0.54
HMGA1-205ENST00000447654 SLC19A3Q9BZV2 496 aa18.45■□□□□ 0.54
HMGA1-205ENST00000447654 SLC35C2Q9NQQ7 365 aa18.45■□□□□ 0.54
HMGA1-205ENST00000447654 CATSPERZQ9NTU4 200 aa18.45■□□□□ 0.54
HMGA1-205ENST00000447654 SIRT5Q9NXA8 310 aa18.45■□□□□ 0.54
HMGA1-205ENST00000447654 PLEKHB1Q9UF11 243 aaPredicted RBP18.45■□□□□ 0.54
HMGA1-205ENST00000447654 A0A0A6YYJ9 748 aa18.44■□□□□ 0.54
HMGA1-205ENST00000447654 TRAV19A0A0A6YYK7 116 aa18.44■□□□□ 0.54
HMGA1-205ENST00000447654 PQLC2LA1A4F0 135 aa18.44■□□□□ 0.54
HMGA1-205ENST00000447654 PLOD3O60568 738 aa18.44■□□□□ 0.54
HMGA1-205ENST00000447654 SNAPINO95295 136 aa18.44■□□□□ 0.54
HMGA1-205ENST00000447654 LHX1P48742 406 aa18.44■□□□□ 0.54
HMGA1-205ENST00000447654 FCN2Q15485 313 aa18.44■□□□□ 0.54
HMGA1-205ENST00000447654 TSNQ15631 228 aaKnown RBP18.44■□□□□ 0.54
HMGA1-205ENST00000447654 RBBP7Q16576 425 aa18.44■□□□□ 0.54
HMGA1-205ENST00000447654 MPP7Q5T2T1 576 aa18.44■□□□□ 0.54
HMGA1-205ENST00000447654 RNLSQ5VYX0 342 aa18.44■□□□□ 0.54
HMGA1-205ENST00000447654 SAMD14Q8IZD0 417 aaPredicted RBP18.44■□□□□ 0.54
HMGA1-205ENST00000447654 ATP6V1C2Q8NEY4 427 aa18.44■□□□□ 0.54
HMGA1-205ENST00000447654 NPAS1Q99742 590 aa18.44■□□□□ 0.54
HMGA1-205ENST00000447654 MYOCQ99972 504 aa18.44■□□□□ 0.54
HMGA1-205ENST00000447654 KCNH6Q9H252 994 aa18.44■□□□□ 0.54
HMGA1-205ENST00000447654 SLC28A3Q9HAS3 691 aa18.44■□□□□ 0.54
HMGA1-205ENST00000447654 RAD18Q9NS91 495 aa18.44■□□□□ 0.54
HMGA1-205ENST00000447654 POFUT2Q9Y2G5 429 aa18.44■□□□□ 0.54
HMGA1-205ENST00000447654 KCNK7Q9Y2U2 307 aa18.44■□□□□ 0.54
HMGA1-205ENST00000447654 MPC2O95563 127 aa18.44■□□□□ 0.54
HMGA1-205ENST00000447654 ZNF682O95780 498 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms