RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 FAM53BQ14153 422 aa17.06■□□□□ 0.32
TRAPPC4-203ENST00000447216 HERC3Q15034 1050 aa17.06■□□□□ 0.32
TRAPPC4-203ENST00000447216 AP5B1Q2VPB7 878 aa17.06■□□□□ 0.32
TRAPPC4-203ENST00000447216 YOD1Q5VVQ6 348 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC4-203ENST00000447216 ACSM2BQ68CK6 577 aa17.06■□□□□ 0.32
TRAPPC4-203ENST00000447216 RHBDD2Q6NTF9 364 aa17.06■□□□□ 0.32
TRAPPC4-203ENST00000447216 EPGNQ6UW88 154 aa17.06■□□□□ 0.32
TRAPPC4-203ENST00000447216 HOMEZQ8IX15 550 aa17.06■□□□□ 0.32
TRAPPC4-203ENST00000447216 SRFBP1Q8NEF9 429 aaKnown RBP17.06■□□□□ 0.32
TRAPPC4-203ENST00000447216 MMABQ96EY8 250 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC4-203ENST00000447216 KCNC2Q96PR1 638 aa17.06■□□□□ 0.32
TRAPPC4-203ENST00000447216 OR52B2Q96RD2 323 aa17.06■□□□□ 0.32
TRAPPC4-203ENST00000447216 CCT7Q99832 543 aa17.06■□□□□ 0.32
TRAPPC4-203ENST00000447216 TBCDQ9BTW9 1192 aa17.06■□□□□ 0.32
TRAPPC4-203ENST00000447216 SCNM1Q9BWG6 230 aa17.06■□□□□ 0.32
TRAPPC4-203ENST00000447216 EBPLQ9BY08 206 aa17.06■□□□□ 0.32
TRAPPC4-203ENST00000447216 ASPSCR1Q9BZE9 553 aa17.06■□□□□ 0.32
TRAPPC4-203ENST00000447216 COPS7BQ9H9Q2 264 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC4-203ENST00000447216 C1orf109Q9NX04 203 aa17.06■□□□□ 0.32
TRAPPC4-203ENST00000447216 WASF3Q9UPY6 502 aa17.06■□□□□ 0.32
TRAPPC4-203ENST00000447216 TMEM184BQ9Y519 407 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC4-203ENST00000447216 PCDHGA3Q9Y5H0 932 aa17.06■□□□□ 0.32
TRAPPC4-203ENST00000447216 A0A1B0GX78 115 aa17.05■□□□□ 0.32
TRAPPC4-203ENST00000447216 STK17BO94768 372 aa17.05■□□□□ 0.32
TRAPPC4-203ENST00000447216 KLK1P06870 262 aa17.05■□□□□ 0.32
TRAPPC4-203ENST00000447216 HBQ1P09105 142 aa17.05■□□□□ 0.32
TRAPPC4-203ENST00000447216 ITGAXP20702 1163 aa17.05■□□□□ 0.32
TRAPPC4-203ENST00000447216 PRPH2P23942 346 aa17.05■□□□□ 0.32
TRAPPC4-203ENST00000447216 RBMS1P29558 406 aaKnown RBP17.05■□□□□ 0.32
TRAPPC4-203ENST00000447216 SLC5A2P31639 672 aa17.05■□□□□ 0.32
TRAPPC4-203ENST00000447216 SLC9A5Q14940 896 aa17.05■□□□□ 0.32
TRAPPC4-203ENST00000447216 ATP6AP1LQ52LC2 224 aa17.05■□□□□ 0.32
TRAPPC4-203ENST00000447216 RFTN2Q52LD8 501 aaPredicted RBP17.05■□□□□ 0.32
TRAPPC4-203ENST00000447216 C6orf136Q5SQH8 315 aa17.05■□□□□ 0.32
TRAPPC4-203ENST00000447216 TMEM164Q5U3C3 297 aa17.05■□□□□ 0.32
TRAPPC4-203ENST00000447216 NXNQ6DKJ4 435 aa17.05■□□□□ 0.32
TRAPPC4-203ENST00000447216 RIPOR1Q6ZS17 1223 aa17.05■□□□□ 0.32
TRAPPC4-203ENST00000447216 ZFAND4Q86XD8 727 aa17.05■□□□□ 0.32
TRAPPC4-203ENST00000447216 GALNT6Q8NCL4 622 aa17.05■□□□□ 0.32
TRAPPC4-203ENST00000447216 OR5T3Q8NGG3 340 aa17.05■□□□□ 0.32
TRAPPC4-203ENST00000447216 PPP3R2Q96LZ3 170 aa17.05■□□□□ 0.32
TRAPPC4-203ENST00000447216 SLC46A1Q96NT5 459 aa17.05■□□□□ 0.32
TRAPPC4-203ENST00000447216 ZPBPQ9BS86 351 aa17.05■□□□□ 0.32
TRAPPC4-203ENST00000447216 C1orf50Q9BV19 199 aa17.05■□□□□ 0.32
TRAPPC4-203ENST00000447216 KCNK13Q9HB14 408 aa17.05■□□□□ 0.32
TRAPPC4-203ENST00000447216 AHSPQ9NZD4 102 aa17.05■□□□□ 0.32
TRAPPC4-203ENST00000447216 HCN3Q9P1Z3 774 aa17.05■□□□□ 0.32
TRAPPC4-203ENST00000447216 POLR3HQ9Y535 204 aaPredicted RBP17.05■□□□□ 0.32
TRAPPC4-203ENST00000447216 NUP210LQ5VU65 1888 aa17.05■□□□□ 0.32
TRAPPC4-203ENST00000447216 AKAP13Q12802 2813 aa17.04■□□□□ 0.32
TRAPPC4-203ENST00000447216 A0A0G2JND7 137 aa17.04■□□□□ 0.32
TRAPPC4-203ENST00000447216 TRABD2BA6NFA1 517 aa17.04■□□□□ 0.32
TRAPPC4-203ENST00000447216 NPIPB8E9PQR5 432 aa17.04■□□□□ 0.32
TRAPPC4-203ENST00000447216 SHOX2O60902 331 aaPredicted RBP17.04■□□□□ 0.32
TRAPPC4-203ENST00000447216 NSA2O95478 260 aaKnown RBP17.04■□□□□ 0.32
TRAPPC4-203ENST00000447216 HIST1H1TP22492 207 aaPredicted RBP17.04■□□□□ 0.32
TRAPPC4-203ENST00000447216 TPP2P29144 1249 aaPredicted RBP17.04■□□□□ 0.32
TRAPPC4-203ENST00000447216 RORAP35398 523 aa17.04■□□□□ 0.32
TRAPPC4-203ENST00000447216 AVPR1BP47901 424 aa17.04■□□□□ 0.32
TRAPPC4-203ENST00000447216 MTTPP55157 894 aa17.04■□□□□ 0.32
TRAPPC4-203ENST00000447216 MAT1AQ00266 395 aaKnown RBP17.04■□□□□ 0.32
TRAPPC4-203ENST00000447216 RUNX2Q13950 521 aa17.04■□□□□ 0.32
TRAPPC4-203ENST00000447216 KIAA0040Q15053 153 aa17.04■□□□□ 0.32
TRAPPC4-203ENST00000447216 SYT16Q17RD7 645 aa17.04■□□□□ 0.32
TRAPPC4-203ENST00000447216 SPIN4Q56A73 249 aa17.04■□□□□ 0.32
TRAPPC4-203ENST00000447216 LCN10Q6JVE6 187 aa17.04■□□□□ 0.32
TRAPPC4-203ENST00000447216 MTERF4Q7Z6M4 381 aaKnown RBP17.04■□□□□ 0.32
TRAPPC4-203ENST00000447216 NUDT13Q86X67 352 aa17.04■□□□□ 0.32
TRAPPC4-203ENST00000447216 ACOT4Q8N9L9 421 aa17.04■□□□□ 0.32
TRAPPC4-203ENST00000447216 FNDC5Q8NAU1 212 aa17.04■□□□□ 0.32
TRAPPC4-203ENST00000447216 GBP5Q96PP8 586 aa17.04■□□□□ 0.32
TRAPPC4-203ENST00000447216 ELAC2Q9BQ52 826 aaKnown RBP17.04■□□□□ 0.32
TRAPPC4-203ENST00000447216 TMEM120AQ9BXJ8 343 aa17.04■□□□□ 0.32
TRAPPC4-203ENST00000447216 NRSN2Q9GZP1 204 aa17.04■□□□□ 0.32
TRAPPC4-203ENST00000447216 DDX31Q9H8H2 851 aaKnown RBP17.04■□□□□ 0.32
TRAPPC4-203ENST00000447216 AKIRIN1Q9H9L7 192 aaPredicted RBP17.04■□□□□ 0.32
TRAPPC4-203ENST00000447216 ASCL3Q9NQ33 180 aa17.04■□□□□ 0.32
TRAPPC4-203ENST00000447216 DLGAP4Q9Y2H0 992 aa17.04■□□□□ 0.32
TRAPPC4-203ENST00000447216 AK5Q9Y6K8 562 aa17.04■□□□□ 0.32
TRAPPC4-203ENST00000447216 A0A0A6YYD5 115 aa17.03■□□□□ 0.32
TRAPPC4-203ENST00000447216 NVLO15381 856 aaKnown RBP17.03■□□□□ 0.32
TRAPPC4-203ENST00000447216 B3GALT2O43825 422 aa17.03■□□□□ 0.32
TRAPPC4-203ENST00000447216 TMPRSS11DO60235 418 aa17.03■□□□□ 0.32
TRAPPC4-203ENST00000447216 PCDH7O60245 1069 aa17.03■□□□□ 0.32
TRAPPC4-203ENST00000447216 BRINP1O60477 761 aa17.03■□□□□ 0.32
TRAPPC4-203ENST00000447216 VPS4BO75351 444 aa17.03■□□□□ 0.32
TRAPPC4-203ENST00000447216 DLGAP3O95886 979 aa17.03■□□□□ 0.32
TRAPPC4-203ENST00000447216 PRR35P0CG20 571 aa17.03■□□□□ 0.32
TRAPPC4-203ENST00000447216 FBLP22087 321 aaKnown RBP17.03■□□□□ 0.32
TRAPPC4-203ENST00000447216 TIA1P31483 386 aaKnown RBP eCLIP17.03■□□□□ 0.32
TRAPPC4-203ENST00000447216 SLAMF1Q13291 335 aa17.03■□□□□ 0.32
TRAPPC4-203ENST00000447216 CCNYL2Q5T2Q4 361 aa17.03■□□□□ 0.32
TRAPPC4-203ENST00000447216 ARHGAP40Q5TG30 622 aa17.03■□□□□ 0.32
TRAPPC4-203ENST00000447216 ZNF385CQ66K41 422 aaPredicted RBP17.03■□□□□ 0.32
TRAPPC4-203ENST00000447216 ACAD11Q709F0 780 aa17.03■□□□□ 0.32
TRAPPC4-203ENST00000447216 LARP4Q71RC2 724 aaKnown RBP eCLIP17.03■□□□□ 0.32
TRAPPC4-203ENST00000447216 PAGE2Q7Z2X7 111 aa17.03■□□□□ 0.32
TRAPPC4-203ENST00000447216 TIPARPQ7Z3E1 657 aaKnown RBP17.03■□□□□ 0.32
TRAPPC4-203ENST00000447216 CPLX4Q7Z7G2 160 aa17.03■□□□□ 0.32
TRAPPC4-203ENST00000447216 DSELQ8IZU8 1212 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms