RNA–Protein interactions for RNA: ENST00000447025.6

MCF2L2-203, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best) BASIC

Gene MCF2L2, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-203ENST00000447025 PEX11GQ96HA9 241 aa8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 PDLIM5Q96HC4 596 aaKnown RBP8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 AMNQ9BXJ7 453 aa8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 POLR3FQ9H1D9 316 aaPredicted RBP8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 PPIL3Q9H2H8 161 aaKnown RBP8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 FAM83DQ9H4H8 585 aa8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 TRABDQ9H4I3 376 aa8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 COQ10BQ9H8M1 238 aa8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 GKN1Q9NS71 199 aa8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 TREX1Q9NSU2 369 aa8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 DECR2Q9NUI1 292 aa8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 WBP1LQ9NX94 342 aa8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 MED11Q9P086 117 aa8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 ADAM28Q9UKQ2 775 aa8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 NOD1Q9Y239 953 aa8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 INSL6Q9Y581 213 aa8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 U3KQV3 271 aa8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 PXDNQ92626 1479 aa8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 CYR61O00622 381 aa8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 BANF1O75531 89 aa8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 KRT33AO76009 404 aa8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 ALPPP05187 535 aa8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 DAOP14920 347 aa8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 TYMPP19971 482 aa8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 TGM2P21980 687 aa8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 S100A11P31949 105 aa8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 MAPK10P53779 464 aa8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 POU4F1Q01851 419 aa8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 C14orf28Q4W4Y0 310 aa8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 SOWAHCQ53LP3 525 aaPredicted RBP8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 CELF3Q5SZQ8 465 aaKnown RBP8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 PRAMEF13Q5VWM6 474 aa8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 FBXW9Q5XUX1 488 aa8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 SLC22A25Q6T423 547 aa8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 FAM183BPQ6ZVS7 135 aa8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 SLITRK4Q8IW52 837 aa8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 NLGN4XQ8N0W4 816 aa8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 SLC44A5Q8NCS7 719 aa8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 CPT1CQ8TCG5 803 aa8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 THAP3Q8WTV1 239 aaPredicted RBP8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 TCTEX1D2Q8WW35 142 aa8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 TFAP2CQ92754 450 aa8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 SLAMF9Q96A28 289 aa8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 ECHDC3Q96DC8 303 aa8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 TSPAN17Q96FV3 270 aa8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 TEAD3Q99594 435 aa8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 OSMRQ99650 979 aa8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 CSTL1Q9H114 145 aa8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 UPF3AQ9H1J1 476 aaKnown RBP8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 SEMA6BQ9H3T3 888 aa8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 ACTL8Q9H568 366 aa8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 HEXA-AS1Q9H8Q6 139 aa8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 BCO1Q9HAY6 547 aa8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 NECTIN3Q9NQS3 549 aa8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 ARMCX3Q9UH62 379 aaPredicted RBP8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 NAGKQ9UJ70 344 aa8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 ZNF451Q9Y4E5 1061 aa8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 IRAK3Q9Y616 596 aa8.34□□□□□ -1.07
MCF2L2-203ENST00000447025 AQP12BA6NM10 295 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 M0R3G1 203 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 RGS9O75916 674 aaPredicted RBP8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 RECQL5O94762 991 aaPredicted RBP8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 AKR7A3O95154 331 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 LDLRP01130 860 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 INHBAP08476 426 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 FGF2P09038 288 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 CCNYL3P0C7X3 344 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 RHCEP18577 417 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 PVALBP20472 110 aaPredicted RBP8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 UQCRC2P22695 453 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 EPHA3P29320 983 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 MC5RP33032 325 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 MAGEA6P43360 314 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 BRCC3P46736 316 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 RAB5BP61020 215 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 ELAVL2Q12926 359 aaKnown RBP8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 SERTAD2Q14140 314 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 DMRTA1Q5VZB9 504 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 ANKRD54Q6NXT1 300 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 ZNF773Q6PK81 442 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 TSSK4Q6SA08 328 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 SHISA2Q6UWI4 295 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 FAM89BQ8N5H3 189 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 FAM83FQ8NEG4 500 aaPredicted RBP8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 OR2V1Q8NHB1 315 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 RNASE8Q8TDE3 154 aaKnown RBP8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 OR14A2Q96R54 314 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 KCNK16Q96T55 309 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 PRRT1Q99946 306 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 INPP5KQ9BT40 448 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 NKX6-2Q9C056 277 aaPredicted RBP8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 ENKD1Q9H0I2 346 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 ING2Q9H160 280 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 PRDM13Q9H4Q3 707 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 SPAG4Q9NPE6 437 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 PARPBPQ9NWS1 579 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 INTS6Q9UL03 887 aaKnown RBP8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 DNPEPQ9ULA0 475 aa8.33□□□□□ -1.08
MCF2L2-203ENST00000447025 KCTD3Q9Y597 815 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms