RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 BTG2P78543 158 aa13.97□□□□□ -0.17
HDAC4-204ENST00000446876 KLRB1Q12918 225 aa13.97□□□□□ -0.17
HDAC4-204ENST00000446876 ABRAXAS2Q15018 415 aa13.97□□□□□ -0.17
HDAC4-204ENST00000446876 CPSF6Q16630 551 aaKnown RBP eCLIP13.97□□□□□ -0.17
HDAC4-204ENST00000446876 VWA5B1Q5TIE3 1220 aa13.97□□□□□ -0.17
HDAC4-204ENST00000446876 NIPAL1Q6NVV3 410 aa13.97□□□□□ -0.17
HDAC4-204ENST00000446876 WDR93Q6P2C0 686 aa13.97□□□□□ -0.17
HDAC4-204ENST00000446876 TRIM40Q6P9F5 258 aa13.97□□□□□ -0.17
HDAC4-204ENST00000446876 ABHD17CQ6PCB6 329 aa13.97□□□□□ -0.17
HDAC4-204ENST00000446876 NDUFAF7Q7L592 441 aa13.97□□□□□ -0.17
HDAC4-204ENST00000446876 UBE3DQ7Z6J8 389 aa13.97□□□□□ -0.17
HDAC4-204ENST00000446876 ANKRD37Q7Z713 158 aa13.97□□□□□ -0.17
HDAC4-204ENST00000446876 TEX19Q8NA77 164 aa13.97□□□□□ -0.17
HDAC4-204ENST00000446876 HUS1BQ8NHY5 278 aa13.97□□□□□ -0.17
HDAC4-204ENST00000446876 ACMSDQ8TDX5 336 aa13.97□□□□□ -0.17
HDAC4-204ENST00000446876 METTL21AQ8WXB1 218 aa13.97□□□□□ -0.17
HDAC4-204ENST00000446876 UBE2E3Q969T4 207 aa13.97□□□□□ -0.17
HDAC4-204ENST00000446876 SEC16BQ96JE7 1060 aa13.97□□□□□ -0.17
HDAC4-204ENST00000446876 VPS50Q96JG6 964 aa13.97□□□□□ -0.17
HDAC4-204ENST00000446876 MTERF1Q99551 399 aaKnown RBP13.97□□□□□ -0.17
HDAC4-204ENST00000446876 SMAD5Q99717 465 aaKnown RBP13.97□□□□□ -0.17
HDAC4-204ENST00000446876 SORBS1Q9BX66 1292 aaKnown RBP13.97□□□□□ -0.17
HDAC4-204ENST00000446876 ZNF700Q9H0M5 742 aa13.97□□□□□ -0.17
HDAC4-204ENST00000446876 EPN3Q9H201 632 aa13.97□□□□□ -0.17
HDAC4-204ENST00000446876 OR51B5Q9H339 312 aa13.97□□□□□ -0.17
HDAC4-204ENST00000446876 SEMA4BQ9NPR2 832 aaPredicted RBP13.97□□□□□ -0.17
HDAC4-204ENST00000446876 LUZP4Q9P127 313 aa13.97□□□□□ -0.17
HDAC4-204ENST00000446876 A0A1B0GTL3 188 aa13.96□□□□□ -0.17
HDAC4-204ENST00000446876 A0A1W2PQ72 361 aa13.96□□□□□ -0.17
HDAC4-204ENST00000446876 PSMD12O00232 456 aaPredicted RBP13.96□□□□□ -0.17
HDAC4-204ENST00000446876 PPP6CO00743 305 aa13.96□□□□□ -0.17
HDAC4-204ENST00000446876 DLX3O60479 287 aa13.96□□□□□ -0.17
HDAC4-204ENST00000446876 RNH1P13489 461 aaKnown RBP13.96□□□□□ -0.17
HDAC4-204ENST00000446876 KRT15P19012 456 aa13.96□□□□□ -0.17
HDAC4-204ENST00000446876 MAOAP21397 527 aa13.96□□□□□ -0.17
HDAC4-204ENST00000446876 CCNG1P51959 295 aa13.96□□□□□ -0.17
HDAC4-204ENST00000446876 CDH13P55290 713 aa13.96□□□□□ -0.17
HDAC4-204ENST00000446876 SOX8P57073 446 aa13.96□□□□□ -0.17
HDAC4-204ENST00000446876 TRAF3Q13114 568 aa13.96□□□□□ -0.17
HDAC4-204ENST00000446876 LIPJQ5W064 366 aa13.96□□□□□ -0.17
HDAC4-204ENST00000446876 ZNF793Q6ZN11 406 aa13.96□□□□□ -0.17
HDAC4-204ENST00000446876 CPEB2Q7Z5Q1 589 aaKnown RBP13.96□□□□□ -0.17
HDAC4-204ENST00000446876 TDRPQ86YL5 185 aa13.96□□□□□ -0.17
HDAC4-204ENST00000446876 RBMXL3Q8N7X1 1067 aaKnown RBP13.96□□□□□ -0.17
HDAC4-204ENST00000446876 FAM47BQ8NA70 645 aa13.96□□□□□ -0.17
HDAC4-204ENST00000446876 TMEM52Q8NDY8 209 aa13.96□□□□□ -0.17
HDAC4-204ENST00000446876 ZNF483Q8TF39 744 aaPredicted RBP13.96□□□□□ -0.17
HDAC4-204ENST00000446876 ATP6V1E2Q96A05 226 aa13.96□□□□□ -0.17
HDAC4-204ENST00000446876 CSF3RQ99062 836 aa13.96□□□□□ -0.17
HDAC4-204ENST00000446876 WDR77Q9BQA1 342 aaPredicted RBP13.96□□□□□ -0.17
HDAC4-204ENST00000446876 PARD6BQ9BYG5 372 aa13.96□□□□□ -0.17
HDAC4-204ENST00000446876 LHPPQ9H008 270 aa13.96□□□□□ -0.17
HDAC4-204ENST00000446876 C12orf65Q9H3J6 166 aaKnown RBP13.96□□□□□ -0.17
HDAC4-204ENST00000446876 COPS7BQ9H9Q2 264 aaPredicted RBP13.96□□□□□ -0.17
HDAC4-204ENST00000446876 DMRT3Q9NQL9 472 aa13.96□□□□□ -0.17
HDAC4-204ENST00000446876 PRDM7Q9NQW5 492 aa13.96□□□□□ -0.17
HDAC4-204ENST00000446876 RIC8BQ9NVN3 520 aa13.96□□□□□ -0.17
HDAC4-204ENST00000446876 EMCNQ9ULC0 261 aa13.96□□□□□ -0.17
HDAC4-204ENST00000446876 SPENQ96T58 3664 aaKnown RBP13.96□□□□□ -0.18
HDAC4-204ENST00000446876 CPAMD8Q8IZJ3 1885 aa13.95□□□□□ -0.18
HDAC4-204ENST00000446876 TLDC2A0PJX2 215 aa13.95□□□□□ -0.18
HDAC4-204ENST00000446876 MAGEB17A8MXT2 336 aa13.95□□□□□ -0.18
HDAC4-204ENST00000446876 B3GALT2O43825 422 aa13.95□□□□□ -0.18
HDAC4-204ENST00000446876 CLDN9O95484 217 aa13.95□□□□□ -0.18
HDAC4-204ENST00000446876 PRR35P0CG20 571 aa13.95□□□□□ -0.18
HDAC4-204ENST00000446876 ITGAMP11215 1152 aa13.95□□□□□ -0.18
HDAC4-204ENST00000446876 IL10P22301 178 aa13.95□□□□□ -0.18
HDAC4-204ENST00000446876 JAK1P23458 1154 aa13.95□□□□□ -0.18
HDAC4-204ENST00000446876 NEK2P51955 445 aa13.95□□□□□ -0.18
HDAC4-204ENST00000446876 HNRNPFP52597 415 aaKnown RBP13.95□□□□□ -0.18
HDAC4-204ENST00000446876 MTTPP55157 894 aa13.95□□□□□ -0.18
HDAC4-204ENST00000446876 RPS13P62277 151 aaKnown RBP13.95□□□□□ -0.18
HDAC4-204ENST00000446876 ZRSR2Q15696 482 aaKnown RBP13.95□□□□□ -0.18
HDAC4-204ENST00000446876 NSDHLQ15738 373 aa13.95□□□□□ -0.18
HDAC4-204ENST00000446876 SFT2D3Q587I9 215 aa13.95□□□□□ -0.18
HDAC4-204ENST00000446876 IRAK1BP1Q5VVH5 260 aa13.95□□□□□ -0.18
HDAC4-204ENST00000446876 METTL2BQ6P1Q9 378 aaKnown RBP13.95□□□□□ -0.18
HDAC4-204ENST00000446876 ATG14Q6ZNE5 492 aa13.95□□□□□ -0.18
HDAC4-204ENST00000446876 SH2D5Q6ZV89 423 aa13.95□□□□□ -0.18
HDAC4-204ENST00000446876 KBTBD2Q8IY47 623 aa13.95□□□□□ -0.18
HDAC4-204ENST00000446876 L3MBTL4Q8NA19 623 aa13.95□□□□□ -0.18
HDAC4-204ENST00000446876 PLPP5Q8NEB5 264 aa13.95□□□□□ -0.18
HDAC4-204ENST00000446876 BRIX1Q8TDN6 353 aaKnown RBP13.95□□□□□ -0.18
HDAC4-204ENST00000446876 MTFMTQ96DP5 389 aaKnown RBP13.95□□□□□ -0.18
HDAC4-204ENST00000446876 IMMP1LQ96LU5 166 aa13.95□□□□□ -0.18
HDAC4-204ENST00000446876 PTCHD1Q96NR3 888 aa13.95□□□□□ -0.18
HDAC4-204ENST00000446876 TMEM237Q96Q45 408 aa13.95□□□□□ -0.18
HDAC4-204ENST00000446876 C19orf25Q9UFG5 118 aaPredicted RBP13.95□□□□□ -0.18
HDAC4-204ENST00000446876 ANAPC2Q9UJX6 822 aa13.95□□□□□ -0.18
HDAC4-204ENST00000446876 PCDHGB7Q9Y5F8 929 aa13.95□□□□□ -0.18
HDAC4-204ENST00000446876 A0A088AWK7 358 aa13.94□□□□□ -0.18
HDAC4-204ENST00000446876 H0YIV9 168 aa13.94□□□□□ -0.18
HDAC4-204ENST00000446876 PCDH17O14917 1159 aa13.94□□□□□ -0.18
HDAC4-204ENST00000446876 PRMT3O60678 531 aa13.94□□□□□ -0.18
HDAC4-204ENST00000446876 UGDHO60701 494 aa13.94□□□□□ -0.18
HDAC4-204ENST00000446876 DPM1O60762 260 aa13.94□□□□□ -0.18
HDAC4-204ENST00000446876 CDH16O75309 829 aa13.94□□□□□ -0.18
HDAC4-204ENST00000446876 ETHE1O95571 254 aa13.94□□□□□ -0.18
HDAC4-204ENST00000446876 ALPPP05187 535 aa13.94□□□□□ -0.18
HDAC4-204ENST00000446876 GSTA1P08263 222 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms