RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 SGSM1Q2NKQ1 1148 aa3.87□□□□□ -1.79
HMGB3P6-201ENST00000444896 HLA-BQ31612 363 aa3.87□□□□□ -1.79
HMGB3P6-201ENST00000444896 ZNF770Q6IQ21 691 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P6-201ENST00000444896 FUT10Q6P4F1 479 aa3.87□□□□□ -1.79
HMGB3P6-201ENST00000444896 MSANTD1Q6ZTZ1 278 aa3.87□□□□□ -1.79
HMGB3P6-201ENST00000444896 GPR141Q7Z602 305 aa3.87□□□□□ -1.79
HMGB3P6-201ENST00000444896 PRUNE1Q86TP1 453 aa3.87□□□□□ -1.79
HMGB3P6-201ENST00000444896 NHLRC2Q8NBF2 726 aa3.87□□□□□ -1.79
HMGB3P6-201ENST00000444896 SNX21Q969T3 373 aa3.87□□□□□ -1.79
HMGB3P6-201ENST00000444896 POM121L2Q96KW2 1035 aa3.87□□□□□ -1.79
HMGB3P6-201ENST00000444896 AK8Q96MA6 479 aa3.87□□□□□ -1.79
HMGB3P6-201ENST00000444896 SYT15Q9BQS2 421 aa3.87□□□□□ -1.79
HMGB3P6-201ENST00000444896 DCTPP1Q9H773 170 aa3.87□□□□□ -1.79
HMGB3P6-201ENST00000444896 ZWILCHQ9H900 591 aa3.87□□□□□ -1.79
HMGB3P6-201ENST00000444896 IARS2Q9NSE4 1012 aaKnown RBP3.87□□□□□ -1.79
HMGB3P6-201ENST00000444896 PANK4Q9NVE7 773 aa3.87□□□□□ -1.79
HMGB3P6-201ENST00000444896 CHMP5Q9NZZ3 219 aa3.87□□□□□ -1.79
HMGB3P6-201ENST00000444896 IL36AQ9UHA7 158 aa3.87□□□□□ -1.79
HMGB3P6-201ENST00000444896 EXOGQ9Y2C4 368 aaKnown RBP3.87□□□□□ -1.79
HMGB3P6-201ENST00000444896 NWD1Q149M9 1564 aa3.87□□□□□ -1.79
HMGB3P6-201ENST00000444896 PHRF1Q9P1Y6 1649 aaKnown RBP3.87□□□□□ -1.79
HMGB3P6-201ENST00000444896 KIF1AQ12756 1690 aa3.87□□□□□ -1.79
HMGB3P6-201ENST00000444896 NPHP4O75161 1426 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P6-201ENST00000444896 NCAPD2Q15021 1401 aa3.87□□□□□ -1.79
HMGB3P6-201ENST00000444896 NFAT5O94916 1531 aa3.86□□□□□ -1.79
HMGB3P6-201ENST00000444896 TRAV18A0A075B6X5 111 aa3.86□□□□□ -1.79
HMGB3P6-201ENST00000444896 GLTPD2A6NH11 291 aa3.86□□□□□ -1.79
HMGB3P6-201ENST00000444896 SLC7A4O43246 635 aa3.86□□□□□ -1.79
HMGB3P6-201ENST00000444896 MAGEC1O60732 1142 aa3.86□□□□□ -1.79
HMGB3P6-201ENST00000444896 FRAT2O75474 233 aaPredicted RBP3.86□□□□□ -1.79
HMGB3P6-201ENST00000444896 MOCS2O96007 188 aaPredicted RBP3.86□□□□□ -1.79
HMGB3P6-201ENST00000444896 C9P02748 559 aa3.86□□□□□ -1.79
HMGB3P6-201ENST00000444896 RLN1P04808 185 aa3.86□□□□□ -1.79
HMGB3P6-201ENST00000444896 HOXB7P09629 217 aa3.86□□□□□ -1.79
HMGB3P6-201ENST00000444896 ZSCAN5DPP0CG00 497 aa3.86□□□□□ -1.79
HMGB3P6-201ENST00000444896 SSTR1P30872 391 aa3.86□□□□□ -1.79
HMGB3P6-201ENST00000444896 DCDC1P59894 354 aa3.86□□□□□ -1.79
HMGB3P6-201ENST00000444896 KRTAP10-6P60371 365 aaPredicted RBP3.86□□□□□ -1.79
HMGB3P6-201ENST00000444896 IRX1P78414 480 aaPredicted RBP3.86□□□□□ -1.79
HMGB3P6-201ENST00000444896 GUCY2DQ02846 1103 aa3.86□□□□□ -1.79
HMGB3P6-201ENST00000444896 CDH18Q13634 790 aa3.86□□□□□ -1.79
HMGB3P6-201ENST00000444896 TAB1Q15750 504 aa3.86□□□□□ -1.79
HMGB3P6-201ENST00000444896 NHSL2Q5HYW2 709 aa3.86□□□□□ -1.79
HMGB3P6-201ENST00000444896 FAM46CQ5VWP2 391 aa3.86□□□□□ -1.79
HMGB3P6-201ENST00000444896 NHLRC1Q6VVB1 395 aa3.86□□□□□ -1.79
HMGB3P6-201ENST00000444896 FCRLAQ7L513 359 aa3.86□□□□□ -1.79
HMGB3P6-201ENST00000444896 CREBRFQ8IUR6 639 aa3.86□□□□□ -1.79
HMGB3P6-201ENST00000444896 ZNF614Q8N883 585 aa3.86□□□□□ -1.79
HMGB3P6-201ENST00000444896 OR6S1Q8NH40 331 aa3.86□□□□□ -1.79
HMGB3P6-201ENST00000444896 MAPK15Q8TD08 544 aa3.86□□□□□ -1.79
HMGB3P6-201ENST00000444896 SLC26A7Q8TE54 656 aa3.86□□□□□ -1.79
HMGB3P6-201ENST00000444896 NXPE2Q96DL1 559 aa3.86□□□□□ -1.79
HMGB3P6-201ENST00000444896 CCDC114Q96M63 670 aa3.86□□□□□ -1.79
HMGB3P6-201ENST00000444896 KRT12Q99456 494 aa3.86□□□□□ -1.79
HMGB3P6-201ENST00000444896 MLPHQ9BV36 600 aaPredicted RBP3.86□□□□□ -1.79
HMGB3P6-201ENST00000444896 TDRD1Q9BXT4 1180 aaKnown RBP3.86□□□□□ -1.79
HMGB3P6-201ENST00000444896 DNAI2Q9GZS0 605 aa3.86□□□□□ -1.79
HMGB3P6-201ENST00000444896 GFRA4Q9GZZ7 299 aa3.86□□□□□ -1.79
HMGB3P6-201ENST00000444896 C10orf88Q9H8K7 445 aa3.86□□□□□ -1.79
HMGB3P6-201ENST00000444896 RNF121Q9H920 327 aa3.86□□□□□ -1.79
HMGB3P6-201ENST00000444896 ZDHHC18Q9NUE0 388 aa3.86□□□□□ -1.79
HMGB3P6-201ENST00000444896 TBC1D13Q9NVG8 400 aa3.86□□□□□ -1.79
HMGB3P6-201ENST00000444896 PILRBQ9UKJ0 227 aa3.86□□□□□ -1.79
HMGB3P6-201ENST00000444896 ITGA11Q9UKX5 1188 aa3.86□□□□□ -1.79
HMGB3P6-201ENST00000444896 RUVBL2Q9Y230 463 aaKnown RBP3.86□□□□□ -1.79
HMGB3P6-201ENST00000444896 ADAMTSL3P82987 1691 aa3.86□□□□□ -1.79
HMGB3P6-201ENST00000444896 OVOS2A0A0G2JMS6 1433 aa3.86□□□□□ -1.79
HMGB3P6-201ENST00000444896 SNED1Q8TER0 1413 aa3.86□□□□□ -1.79
HMGB3P6-201ENST00000444896 NCOA3Q9Y6Q9 1424 aa3.86□□□□□ -1.79
HMGB3P6-201ENST00000444896 SLIT3O75094 1523 aa3.85□□□□□ -1.79
HMGB3P6-201ENST00000444896 MED1Q15648 1581 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P6-201ENST00000444896 LMO7Q8WWI1 1683 aa3.85□□□□□ -1.79
HMGB3P6-201ENST00000444896 MEX3AA1L020 520 aaKnown RBP3.85□□□□□ -1.79
HMGB3P6-201ENST00000444896 A4D1N5 150 aa3.85□□□□□ -1.79
HMGB3P6-201ENST00000444896 YDJCA8MPS7 323 aa3.85□□□□□ -1.79
HMGB3P6-201ENST00000444896 NPIPA3F8WFD2 350 aa3.85□□□□□ -1.79
HMGB3P6-201ENST00000444896 H0Y626 953 aa3.85□□□□□ -1.79
HMGB3P6-201ENST00000444896 SAP30O75446 220 aa3.85□□□□□ -1.79
HMGB3P6-201ENST00000444896 REC8O95072 547 aa3.85□□□□□ -1.79
HMGB3P6-201ENST00000444896 YES1P07947 543 aa3.85□□□□□ -1.79
HMGB3P6-201ENST00000444896 SUPT20HL2P0C7V6 817 aa3.85□□□□□ -1.79
HMGB3P6-201ENST00000444896 PRKAR1AP10644 381 aa3.85□□□□□ -1.79
HMGB3P6-201ENST00000444896 TYMPP19971 482 aa3.85□□□□□ -1.79
HMGB3P6-201ENST00000444896 RBMS1P29558 406 aaKnown RBP3.85□□□□□ -1.79
HMGB3P6-201ENST00000444896 HLA-FP30511 346 aa3.85□□□□□ -1.79
HMGB3P6-201ENST00000444896 MMP12P39900 470 aa3.85□□□□□ -1.79
HMGB3P6-201ENST00000444896 CLK1P49759 484 aaKnown RBP3.85□□□□□ -1.79
HMGB3P6-201ENST00000444896 CLDN17P56750 224 aa3.85□□□□□ -1.79
HMGB3P6-201ENST00000444896 TEFQ10587 303 aa3.85□□□□□ -1.79
HMGB3P6-201ENST00000444896 SGCGQ13326 291 aa3.85□□□□□ -1.79
HMGB3P6-201ENST00000444896 FCN2Q15485 313 aa3.85□□□□□ -1.79
HMGB3P6-201ENST00000444896 TAF7Q15545 349 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P6-201ENST00000444896 DUSP5Q16690 384 aa3.85□□□□□ -1.79
HMGB3P6-201ENST00000444896 ZNF497Q6ZNH5 498 aa3.85□□□□□ -1.79
HMGB3P6-201ENST00000444896 CATSPERDQ86XM0 798 aa3.85□□□□□ -1.79
HMGB3P6-201ENST00000444896 MEX3DQ86XN8 651 aaKnown RBP3.85□□□□□ -1.79
HMGB3P6-201ENST00000444896 PRSS35Q8N3Z0 413 aa3.85□□□□□ -1.79
HMGB3P6-201ENST00000444896 AMER3Q8N944 861 aa3.85□□□□□ -1.79
HMGB3P6-201ENST00000444896 OR4C15Q8NGM1 316 aa3.85□□□□□ -1.79
HMGB3P6-201ENST00000444896 SAP25Q8TEE9 199 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms