RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 ADGRE2Q9UHX3 823 aa17.54■□□□□ 0.4
CCDC188-202ENST00000444532 SCN2AQ99250 2005 aa17.54■□□□□ 0.4
CCDC188-202ENST00000444532 PRMT3O60678 531 aa17.53■□□□□ 0.4
CCDC188-202ENST00000444532 UGDHO60701 494 aa17.53■□□□□ 0.4
CCDC188-202ENST00000444532 B4GALT2O60909 372 aa17.53■□□□□ 0.4
CCDC188-202ENST00000444532 SEC24DO94855 1032 aaPredicted RBP17.53■□□□□ 0.4
CCDC188-202ENST00000444532 TNFRSF8P28908 595 aa17.53■□□□□ 0.4
CCDC188-202ENST00000444532 CD97P48960 835 aa17.53■□□□□ 0.4
CCDC188-202ENST00000444532 ACTN3Q08043 901 aaPredicted RBP17.53■□□□□ 0.4
CCDC188-202ENST00000444532 MFAP5Q13361 173 aa17.53■□□□□ 0.4
CCDC188-202ENST00000444532 PLAG1Q6DJT9 500 aa17.53■□□□□ 0.4
CCDC188-202ENST00000444532 GRHL2Q6ISB3 625 aa17.53■□□□□ 0.4
CCDC188-202ENST00000444532 QSOX2Q6ZRP7 698 aa17.53■□□□□ 0.4
CCDC188-202ENST00000444532 Q6ZS92 163 aa17.53■□□□□ 0.4
CCDC188-202ENST00000444532 CA13Q8N1Q1 262 aa17.53■□□□□ 0.4
CCDC188-202ENST00000444532 Q8NA96 180 aa17.53■□□□□ 0.4
CCDC188-202ENST00000444532 OR7G3Q8NG95 312 aa17.53■□□□□ 0.4
CCDC188-202ENST00000444532 PPP4R1Q8TF05 950 aa17.53■□□□□ 0.4
CCDC188-202ENST00000444532 ZNF473Q8WTR7 871 aaKnown RBP17.53■□□□□ 0.4
CCDC188-202ENST00000444532 MIB2Q96AX9 1013 aa17.53■□□□□ 0.4
CCDC188-202ENST00000444532 QRFPRQ96P65 431 aa17.53■□□□□ 0.4
CCDC188-202ENST00000444532 SERINC2Q96SA4 455 aa17.53■□□□□ 0.4
CCDC188-202ENST00000444532 WDR77Q9BQA1 342 aaPredicted RBP17.53■□□□□ 0.4
CCDC188-202ENST00000444532 MRPL57Q9BQC6 102 aaKnown RBP17.53■□□□□ 0.4
CCDC188-202ENST00000444532 TSC22D4Q9Y3Q8 395 aa17.53■□□□□ 0.4
CCDC188-202ENST00000444532 IGHV3-20A0A0C4DH32 117 aa17.52■□□□□ 0.4
CCDC188-202ENST00000444532 IQANK1A0A1B0GTG1 560 aa17.52■□□□□ 0.4
CCDC188-202ENST00000444532 STX16-NPEPL1H3BU86 382 aa17.52■□□□□ 0.4
CCDC188-202ENST00000444532 E2F3O00716 465 aa17.52■□□□□ 0.4
CCDC188-202ENST00000444532 STX16O14662 325 aa17.52■□□□□ 0.4
CCDC188-202ENST00000444532 B3GALT2O43825 422 aa17.52■□□□□ 0.4
CCDC188-202ENST00000444532 SMIM24O75264 130 aa17.52■□□□□ 0.4
CCDC188-202ENST00000444532 PLA2G16P53816 162 aa17.52■□□□□ 0.4
CCDC188-202ENST00000444532 GTF2H2Q13888 395 aa17.52■□□□□ 0.4
CCDC188-202ENST00000444532 IGFBP7Q16270 282 aa17.52■□□□□ 0.4
CCDC188-202ENST00000444532 EXT1Q16394 746 aa17.52■□□□□ 0.4
CCDC188-202ENST00000444532 TMEM35AQ53FP2 167 aa17.52■□□□□ 0.4
CCDC188-202ENST00000444532 SFT2D3Q587I9 215 aa17.52■□□□□ 0.4
CCDC188-202ENST00000444532 ADNP2Q6IQ32 1131 aa17.52■□□□□ 0.4
CCDC188-202ENST00000444532 GTF2H2CQ6P1K8 395 aa17.52■□□□□ 0.4
CCDC188-202ENST00000444532 ABHD17CQ6PCB6 329 aa17.52■□□□□ 0.4
CCDC188-202ENST00000444532 CHSY3Q70JA7 882 aa17.52■□□□□ 0.4
CCDC188-202ENST00000444532 LCA5Q86VQ0 697 aa17.52■□□□□ 0.4
CCDC188-202ENST00000444532 PTGR2Q8N8N7 351 aaPredicted RBP17.52■□□□□ 0.4
CCDC188-202ENST00000444532 CPT1CQ8TCG5 803 aa17.52■□□□□ 0.4
CCDC188-202ENST00000444532 BRIX1Q8TDN6 353 aaKnown RBP17.52■□□□□ 0.4
CCDC188-202ENST00000444532 PTCHD1Q96NR3 888 aa17.52■□□□□ 0.4
CCDC188-202ENST00000444532 KCNC2Q96PR1 638 aa17.52■□□□□ 0.4
CCDC188-202ENST00000444532 F2RL3Q96RI0 385 aa17.52■□□□□ 0.4
CCDC188-202ENST00000444532 MS4A8Q9BY19 250 aa17.52■□□□□ 0.4
CCDC188-202ENST00000444532 ROGDIQ9GZN7 287 aa17.52■□□□□ 0.4
CCDC188-202ENST00000444532 ILKAPQ9H0C8 392 aaPredicted RBP17.52■□□□□ 0.4
CCDC188-202ENST00000444532 MRPL46Q9H2W6 279 aaKnown RBP17.52■□□□□ 0.4
CCDC188-202ENST00000444532 EPB41L4BQ9H329 900 aa17.52■□□□□ 0.4
CCDC188-202ENST00000444532 CLMPQ9H6B4 373 aa17.52■□□□□ 0.4
CCDC188-202ENST00000444532 IPPKQ9H8X2 491 aa17.52■□□□□ 0.4
CCDC188-202ENST00000444532 ACTR8Q9H981 624 aa17.52■□□□□ 0.4
CCDC188-202ENST00000444532 PRDM9Q9NQV7 894 aa17.52■□□□□ 0.4
CCDC188-202ENST00000444532 XPR1Q9UBH6 696 aa17.52■□□□□ 0.4
CCDC188-202ENST00000444532 PCDHGA11Q9Y5H2 935 aa17.52■□□□□ 0.4
CCDC188-202ENST00000444532 UBR5O95071 2799 aaPredicted RBP17.52■□□□□ 0.4
CCDC188-202ENST00000444532 A0A0G2JN53 185 aa17.51■□□□□ 0.39
CCDC188-202ENST00000444532 LRRC14BA6NHZ5 514 aa17.51■□□□□ 0.39
CCDC188-202ENST00000444532 FAM227AF5H4B4 570 aa17.51■□□□□ 0.39
CCDC188-202ENST00000444532 SIX3O95343 332 aaPredicted RBP17.51■□□□□ 0.39
CCDC188-202ENST00000444532 MYBL2P10244 700 aa17.51■□□□□ 0.39
CCDC188-202ENST00000444532 ITGAMP11215 1152 aa17.51■□□□□ 0.39
CCDC188-202ENST00000444532 PCNAP12004 261 aa17.51■□□□□ 0.39
CCDC188-202ENST00000444532 SOX11P35716 441 aa17.51■□□□□ 0.39
CCDC188-202ENST00000444532 PIK3CBP42338 1070 aa17.51■□□□□ 0.39
CCDC188-202ENST00000444532 MTTPP55157 894 aa17.51■□□□□ 0.39
CCDC188-202ENST00000444532 OR4D2P58180 307 aa17.51■□□□□ 0.39
CCDC188-202ENST00000444532 RUNX2Q13950 521 aa17.51■□□□□ 0.39
CCDC188-202ENST00000444532 BTBD16Q32M84 506 aa17.51■□□□□ 0.39
CCDC188-202ENST00000444532 LINC00696Q6ZRV3 163 aa17.51■□□□□ 0.39
CCDC188-202ENST00000444532 GOLGA7Q7Z5G4 137 aa17.51■□□□□ 0.39
CCDC188-202ENST00000444532 GSPT2Q8IYD1 628 aaKnown RBP17.51■□□□□ 0.39
CCDC188-202ENST00000444532 IQCKQ8N0W5 287 aa17.51■□□□□ 0.39
CCDC188-202ENST00000444532 EFCAB3Q8N7B9 438 aa17.51■□□□□ 0.39
CCDC188-202ENST00000444532 ARMC2Q8NEN0 867 aa17.51■□□□□ 0.39
CCDC188-202ENST00000444532 DNAJB14Q8TBM8 379 aa17.51■□□□□ 0.39
CCDC188-202ENST00000444532 M1APQ8TC57 530 aa17.51■□□□□ 0.39
CCDC188-202ENST00000444532 ADAMTS18Q8TE60 1221 aa17.51■□□□□ 0.39
CCDC188-202ENST00000444532 TSLPQ969D9 159 aa17.51■□□□□ 0.39
CCDC188-202ENST00000444532 PHF21BQ96EK2 531 aa17.51■□□□□ 0.39
CCDC188-202ENST00000444532 CMTM7Q96FZ5 175 aa17.51■□□□□ 0.39
CCDC188-202ENST00000444532 LPAR4Q99677 370 aa17.51■□□□□ 0.39
CCDC188-202ENST00000444532 TBCDQ9BTW9 1192 aa17.51■□□□□ 0.39
CCDC188-202ENST00000444532 COPS7BQ9H9Q2 264 aaPredicted RBP17.51■□□□□ 0.39
CCDC188-202ENST00000444532 PRDM7Q9NQW5 492 aa17.51■□□□□ 0.39
CCDC188-202ENST00000444532 PTGFRNQ9P2B2 879 aa17.51■□□□□ 0.39
CCDC188-202ENST00000444532 PSMC3IPQ9P2W1 217 aaPredicted RBP17.51■□□□□ 0.39
CCDC188-202ENST00000444532 PLAAQ9Y263 795 aa17.51■□□□□ 0.39
CCDC188-202ENST00000444532 MMACHCQ9Y4U1 282 aa17.51■□□□□ 0.39
CCDC188-202ENST00000444532 H0YIV9 168 aa17.5■□□□□ 0.39
CCDC188-202ENST00000444532 CELA2AP08217 269 aa17.5■□□□□ 0.39
CCDC188-202ENST00000444532 EEF1DP29692 281 aaKnown RBP17.5■□□□□ 0.39
CCDC188-202ENST00000444532 RAB38P57729 211 aa17.5■□□□□ 0.39
CCDC188-202ENST00000444532 BTG2P78543 158 aa17.5■□□□□ 0.39
CCDC188-202ENST00000444532 RCN2Q14257 317 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms