RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 LRRC70Q7Z2Q7 622 aa18.86■□□□□ 0.61
LRCH3-208ENST00000443727 CCDC91Q7Z6B0 441 aa18.86■□□□□ 0.61
LRCH3-208ENST00000443727 ISCA2Q86U28 154 aa18.86■□□□□ 0.61
LRCH3-208ENST00000443727 CA13Q8N1Q1 262 aa18.86■□□□□ 0.61
LRCH3-208ENST00000443727 SLC5A8Q8N695 610 aa18.86■□□□□ 0.61
LRCH3-208ENST00000443727 IFT81Q8WYA0 676 aa18.86■□□□□ 0.61
LRCH3-208ENST00000443727 MS4A6EQ96DS6 147 aa18.86■□□□□ 0.61
LRCH3-208ENST00000443727 REXO4Q9GZR2 422 aaKnown RBP18.86■□□□□ 0.61
LRCH3-208ENST00000443727 AICDAQ9GZX7 198 aa18.86■□□□□ 0.61
LRCH3-208ENST00000443727 COPS7BQ9H9Q2 264 aaPredicted RBP18.86■□□□□ 0.61
LRCH3-208ENST00000443727 PRDM9Q9NQV7 894 aa18.86■□□□□ 0.61
LRCH3-208ENST00000443727 IGSF5Q9NSI5 407 aa18.86■□□□□ 0.61
LRCH3-208ENST00000443727 SPTAN1Q13813 2472 aaKnown RBP18.86■□□□□ 0.61
LRCH3-208ENST00000443727 A0A087X1B8 175 aa18.85■□□□□ 0.61
LRCH3-208ENST00000443727 C4orf51C9J302 202 aa18.85■□□□□ 0.61
LRCH3-208ENST00000443727 UBXN8O00124 270 aa18.85■□□□□ 0.61
LRCH3-208ENST00000443727 B3GALT2O43825 422 aa18.85■□□□□ 0.61
LRCH3-208ENST00000443727 PRAMEF2O60811 474 aa18.85■□□□□ 0.61
LRCH3-208ENST00000443727 KERAO60938 352 aa18.85■□□□□ 0.61
LRCH3-208ENST00000443727 EDN3P14138 238 aa18.85■□□□□ 0.61
LRCH3-208ENST00000443727 KCNC1P48547 511 aa18.85■□□□□ 0.61
LRCH3-208ENST00000443727 SLC26A5P58743 744 aa18.85■□□□□ 0.61
LRCH3-208ENST00000443727 DLG1Q12959 904 aa18.85■□□□□ 0.61
LRCH3-208ENST00000443727 CHIT1Q13231 466 aa18.85■□□□□ 0.61
LRCH3-208ENST00000443727 INAQ16352 499 aa18.85■□□□□ 0.61
LRCH3-208ENST00000443727 MEP1AQ16819 746 aa18.85■□□□□ 0.61
LRCH3-208ENST00000443727 FAM83EQ2M2I3 478 aa18.85■□□□□ 0.61
LRCH3-208ENST00000443727 TRIM40Q6P9F5 258 aa18.85■□□□□ 0.61
LRCH3-208ENST00000443727 CRLF3Q8IUI8 442 aa18.85■□□□□ 0.61
LRCH3-208ENST00000443727 BEST3Q8N1M1 668 aa18.85■□□□□ 0.61
LRCH3-208ENST00000443727 MMGT1Q8N4V1 131 aa18.85■□□□□ 0.61
LRCH3-208ENST00000443727 KCTD4Q8WVF5 259 aa18.85■□□□□ 0.61
LRCH3-208ENST00000443727 NXNL1Q96CM4 212 aa18.85■□□□□ 0.61
LRCH3-208ENST00000443727 TSPYL1Q9H0U9 437 aa18.85■□□□□ 0.61
LRCH3-208ENST00000443727 COPG2Q9UBF2 871 aa18.85■□□□□ 0.61
LRCH3-208ENST00000443727 OPTCQ9UBM4 332 aa18.85■□□□□ 0.61
LRCH3-208ENST00000443727 SLC5A6Q9Y289 635 aa18.85■□□□□ 0.61
LRCH3-208ENST00000443727 SYCE1LA8MT33 242 aa18.84■□□□□ 0.61
LRCH3-208ENST00000443727 RASAL1O95294 804 aa18.84■□□□□ 0.61
LRCH3-208ENST00000443727 DDAH2O95865 285 aa18.84■□□□□ 0.61
LRCH3-208ENST00000443727 CTAGE8P0CG41 777 aa18.84■□□□□ 0.61
LRCH3-208ENST00000443727 H3F3CQ6NXT2 135 aa18.84■□□□□ 0.61
LRCH3-208ENST00000443727 CTAGE4Q8IX94 777 aa18.84■□□□□ 0.61
LRCH3-208ENST00000443727 OR2L5Q8NG80 312 aa18.84■□□□□ 0.61
LRCH3-208ENST00000443727 UBE2E3Q969T4 207 aa18.84■□□□□ 0.61
LRCH3-208ENST00000443727 WDR34Q96EX3 536 aa18.84■□□□□ 0.61
LRCH3-208ENST00000443727 C5orf34Q96MH7 638 aa18.84■□□□□ 0.61
LRCH3-208ENST00000443727 UTP23Q9BRU9 249 aaKnown RBP18.84■□□□□ 0.61
LRCH3-208ENST00000443727 NPLQ9BXD5 320 aaPredicted RBP18.84■□□□□ 0.61
LRCH3-208ENST00000443727 SNX15Q9NRS6 342 aa18.84■□□□□ 0.61
LRCH3-208ENST00000443727 NINJ2Q9NZG7 142 aa18.84■□□□□ 0.61
LRCH3-208ENST00000443727 ZNF490Q9ULM2 529 aaPredicted RBP18.84■□□□□ 0.61
LRCH3-208ENST00000443727 ANGPTL3Q9Y5C1 460 aa18.84■□□□□ 0.61
LRCH3-208ENST00000443727 SPTBN1Q01082 2364 aaKnown RBP18.84■□□□□ 0.61
LRCH3-208ENST00000443727 A8MUA0 341 aa18.83■□□□□ 0.6
LRCH3-208ENST00000443727 CLDN4O14493 209 aa18.83■□□□□ 0.6
LRCH3-208ENST00000443727 PRAMEF4O60810 478 aa18.83■□□□□ 0.6
LRCH3-208ENST00000443727 C2P06681 752 aa18.83■□□□□ 0.6
LRCH3-208ENST00000443727 TYK2P29597 1187 aa18.83■□□□□ 0.6
LRCH3-208ENST00000443727 MSH2P43246 934 aa18.83■□□□□ 0.6
LRCH3-208ENST00000443727 IRF9Q00978 393 aa18.83■□□□□ 0.6
LRCH3-208ENST00000443727 OC90Q02509 493 aaPredicted RBP18.83■□□□□ 0.6
LRCH3-208ENST00000443727 RUNX2Q13950 521 aa18.83■□□□□ 0.6
LRCH3-208ENST00000443727 RCN2Q14257 317 aa18.83■□□□□ 0.6
LRCH3-208ENST00000443727 TBCCQ15814 346 aa18.83■□□□□ 0.6
LRCH3-208ENST00000443727 PRAMEF9Q5VWM5 478 aa18.83■□□□□ 0.6
LRCH3-208ENST00000443727 ADNP2Q6IQ32 1131 aa18.83■□□□□ 0.6
LRCH3-208ENST00000443727 KLC3Q6P597 504 aa18.83■□□□□ 0.6
LRCH3-208ENST00000443727 NOA1Q8NC60 698 aaKnown RBP18.83■□□□□ 0.6
LRCH3-208ENST00000443727 ADAMTS18Q8TE60 1221 aa18.83■□□□□ 0.6
LRCH3-208ENST00000443727 ATOH8Q96SQ7 321 aa18.83■□□□□ 0.6
LRCH3-208ENST00000443727 SLX1AQ9BQ83 275 aa18.83■□□□□ 0.6
LRCH3-208ENST00000443727 NECTIN3Q9NQS3 549 aa18.83■□□□□ 0.6
LRCH3-208ENST00000443727 ANKRD10Q9NXR5 420 aa18.83■□□□□ 0.6
LRCH3-208ENST00000443727 ERRFI1Q9UJM3 462 aaPredicted RBP18.83■□□□□ 0.6
LRCH3-208ENST00000443727 OSGIN2Q9Y236 505 aa18.83■□□□□ 0.6
LRCH3-208ENST00000443727 MRPS33Q9Y291 106 aaKnown RBP18.83■□□□□ 0.6
LRCH3-208ENST00000443727 MMACHCQ9Y4U1 282 aa18.83■□□□□ 0.6
LRCH3-208ENST00000443727 ASB1Q9Y576 335 aa18.83■□□□□ 0.6
LRCH3-208ENST00000443727 IKBKGQ9Y6K9 419 aa18.83■□□□□ 0.6
LRCH3-208ENST00000443727 A0A096LPK6 155 aa18.82■□□□□ 0.6
LRCH3-208ENST00000443727 TCRBV16S1A1N1A0A5B0 115 aa18.82■□□□□ 0.6
LRCH3-208ENST00000443727 K7EPI3 171 aa18.82■□□□□ 0.6
LRCH3-208ENST00000443727 E2F3O00716 465 aa18.82■□□□□ 0.6
LRCH3-208ENST00000443727 ACSL3O95573 720 aa18.82■□□□□ 0.6
LRCH3-208ENST00000443727 CRYABP02511 175 aaKnown RBP18.82■□□□□ 0.6
LRCH3-208ENST00000443727 PCNAP12004 261 aa18.82■□□□□ 0.6
LRCH3-208ENST00000443727 GFAPP14136 432 aa18.82■□□□□ 0.6
LRCH3-208ENST00000443727 EPB42P16452 691 aa18.82■□□□□ 0.6
LRCH3-208ENST00000443727 CD22P20273 847 aa18.82■□□□□ 0.6
LRCH3-208ENST00000443727 SERPINB8P50452 374 aa18.82■□□□□ 0.6
LRCH3-208ENST00000443727 MTTPP55157 894 aa18.82■□□□□ 0.6
LRCH3-208ENST00000443727 RAB38P57729 211 aa18.82■□□□□ 0.6
LRCH3-208ENST00000443727 SLC13A2Q13183 592 aa18.82■□□□□ 0.6
LRCH3-208ENST00000443727 TUBA3CQ13748 450 aa18.82■□□□□ 0.6
LRCH3-208ENST00000443727 ZNF766Q5HY98 468 aa18.82■□□□□ 0.6
LRCH3-208ENST00000443727 TUBA3EQ6PEY2 450 aa18.82■□□□□ 0.6
LRCH3-208ENST00000443727 VN1R5Q7Z5H4 357 aa18.82■□□□□ 0.6
LRCH3-208ENST00000443727 MYLK4Q86YV6 388 aaPredicted RBP18.82■□□□□ 0.6
LRCH3-208ENST00000443727 CENPLQ8N0S6 344 aaPredicted RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms