RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 SSR4P51571 173 aa13.38□□□□□ -0.27
HMGN1-208ENST00000443046 CDK16Q00536 496 aa13.38□□□□□ -0.27
HMGN1-208ENST00000443046 SIX1Q15475 284 aaPredicted RBP13.38□□□□□ -0.27
HMGN1-208ENST00000443046 DRICH1Q6PGQ1 229 aaPredicted RBP13.38□□□□□ -0.27
HMGN1-208ENST00000443046 C4orf22Q6V702 233 aa13.38□□□□□ -0.27
HMGN1-208ENST00000443046 MBOAT1Q6ZNC8 495 aa13.38□□□□□ -0.27
HMGN1-208ENST00000443046 TRILQ7L0X0 811 aa13.38□□□□□ -0.27
HMGN1-208ENST00000443046 GPALPP1Q8IXQ4 340 aa13.38□□□□□ -0.27
HMGN1-208ENST00000443046 CPNE9Q8IYJ1 553 aa13.38□□□□□ -0.27
HMGN1-208ENST00000443046 ACRBPQ8NEB7 543 aa13.38□□□□□ -0.27
HMGN1-208ENST00000443046 UTP15Q8TED0 518 aaKnown RBP13.38□□□□□ -0.27
HMGN1-208ENST00000443046 SMC6Q96SB8 1091 aa13.38□□□□□ -0.27
HMGN1-208ENST00000443046 GPR21Q99679 349 aa13.38□□□□□ -0.27
HMGN1-208ENST00000443046 SMR3AQ99954 134 aa13.38□□□□□ -0.27
HMGN1-208ENST00000443046 TTTY12Q9BZ98 90 aa13.38□□□□□ -0.27
HMGN1-208ENST00000443046 ATG10Q9H0Y0 220 aa13.38□□□□□ -0.27
HMGN1-208ENST00000443046 LIPGQ9Y5X9 500 aa13.38□□□□□ -0.27
HMGN1-208ENST00000443046 CSPG4Q6UVK1 2322 aa13.38□□□□□ -0.27
HMGN1-208ENST00000443046 TCRBV7S3A2A0A539 114 aa13.37□□□□□ -0.27
HMGN1-208ENST00000443046 A6NNC1 897 aa13.37□□□□□ -0.27
HMGN1-208ENST00000443046 FAM166BA8MTA8 275 aa13.37□□□□□ -0.27
HMGN1-208ENST00000443046 AQP7O14520 342 aa13.37□□□□□ -0.27
HMGN1-208ENST00000443046 TPSB2P20231 275 aa13.37□□□□□ -0.27
HMGN1-208ENST00000443046 HOXC12P31275 282 aa13.37□□□□□ -0.27
HMGN1-208ENST00000443046 PEX19P40855 299 aa13.37□□□□□ -0.27
HMGN1-208ENST00000443046 CCR8P51685 355 aa13.37□□□□□ -0.27
HMGN1-208ENST00000443046 BASP1P80723 227 aaKnown RBP13.37□□□□□ -0.27
HMGN1-208ENST00000443046 TIAL1Q01085 375 aaKnown RBP eCLIP13.37□□□□□ -0.27
HMGN1-208ENST00000443046 HYAL2Q12891 473 aa13.37□□□□□ -0.27
HMGN1-208ENST00000443046 NAE1Q13564 534 aa13.37□□□□□ -0.27
HMGN1-208ENST00000443046 SNTB1Q13884 538 aaKnown RBP13.37□□□□□ -0.27
HMGN1-208ENST00000443046 TPSAB1Q15661 275 aa13.37□□□□□ -0.27
HMGN1-208ENST00000443046 HYAL4Q2M3T9 481 aa13.37□□□□□ -0.27
HMGN1-208ENST00000443046 XKR6Q5GH73 641 aa13.37□□□□□ -0.27
HMGN1-208ENST00000443046 NDUFAF5Q5TEU4 345 aa13.37□□□□□ -0.27
HMGN1-208ENST00000443046 ZNF470Q6ECI4 717 aa13.37□□□□□ -0.27
HMGN1-208ENST00000443046 ZNF585AQ6P3V2 769 aa13.37□□□□□ -0.27
HMGN1-208ENST00000443046 PAMR1Q6UXH9 720 aa13.37□□□□□ -0.27
HMGN1-208ENST00000443046 ABHD13Q7L211 337 aa13.37□□□□□ -0.27
HMGN1-208ENST00000443046 SLC22A16Q86VW1 577 aa13.37□□□□□ -0.27
HMGN1-208ENST00000443046 DENND6AQ8IWF6 608 aa13.37□□□□□ -0.27
HMGN1-208ENST00000443046 SCUBE1Q8IWY4 988 aa13.37□□□□□ -0.27
HMGN1-208ENST00000443046 WFDC11Q8NEX6 87 aa13.37□□□□□ -0.27
HMGN1-208ENST00000443046 ARSGQ96EG1 525 aa13.37□□□□□ -0.27
HMGN1-208ENST00000443046 VMP1Q96GC9 406 aa13.37□□□□□ -0.27
HMGN1-208ENST00000443046 HAUS8Q9BT25 410 aa13.37□□□□□ -0.27
HMGN1-208ENST00000443046 SPNS1Q9H2V7 528 aa13.37□□□□□ -0.27
HMGN1-208ENST00000443046 PARVBQ9HBI1 364 aa13.37□□□□□ -0.27
HMGN1-208ENST00000443046 ZFP69BQ9UJL9 534 aa13.37□□□□□ -0.27
HMGN1-208ENST00000443046 FBXW2Q9UKT8 454 aa13.37□□□□□ -0.27
HMGN1-208ENST00000443046 COMMD10Q9Y6G5 202 aa13.37□□□□□ -0.27
HMGN1-208ENST00000443046 CTAGE15A4D2H0 777 aa13.36□□□□□ -0.27
HMGN1-208ENST00000443046 ACOT7O00154 380 aa13.36□□□□□ -0.27
HMGN1-208ENST00000443046 OR1F1O43749 312 aa13.36□□□□□ -0.27
HMGN1-208ENST00000443046 SUSD5O60279 629 aa13.36□□□□□ -0.27
HMGN1-208ENST00000443046 WDR1O75083 606 aa13.36□□□□□ -0.27
HMGN1-208ENST00000443046 AVILO75366 819 aa13.36□□□□□ -0.27
HMGN1-208ENST00000443046 MYO1DO94832 1006 aa13.36□□□□□ -0.27
HMGN1-208ENST00000443046 ATE1O95260 518 aa13.36□□□□□ -0.27
HMGN1-208ENST00000443046 IPO7O95373 1038 aaKnown RBP13.36□□□□□ -0.27
HMGN1-208ENST00000443046 C8GP07360 202 aa13.36□□□□□ -0.27
HMGN1-208ENST00000443046 RNH1P13489 461 aaKnown RBP13.36□□□□□ -0.27
HMGN1-208ENST00000443046 AHRP35869 848 aa13.36□□□□□ -0.27
HMGN1-208ENST00000443046 SCTRP47872 440 aa13.36□□□□□ -0.27
HMGN1-208ENST00000443046 DGKQP52824 942 aa13.36□□□□□ -0.27
HMGN1-208ENST00000443046 FOXO1Q12778 655 aa13.36□□□□□ -0.27
HMGN1-208ENST00000443046 CTBP1Q13363 440 aa13.36□□□□□ -0.27
HMGN1-208ENST00000443046 DAZAP2Q15038 168 aaPredicted RBP13.36□□□□□ -0.27
HMGN1-208ENST00000443046 CCNG2Q16589 344 aa13.36□□□□□ -0.27
HMGN1-208ENST00000443046 SKOR2Q2VWA4 1001 aaPredicted RBP13.36□□□□□ -0.27
HMGN1-208ENST00000443046 RIPPLY2Q5TAB7 128 aa13.36□□□□□ -0.27
HMGN1-208ENST00000443046 C16orf47Q6ZP98 133 aaPredicted RBP13.36□□□□□ -0.27
HMGN1-208ENST00000443046 CTAGE6Q86UF2 777 aa13.36□□□□□ -0.27
HMGN1-208ENST00000443046 CA13Q8N1Q1 262 aa13.36□□□□□ -0.27
HMGN1-208ENST00000443046 TMEM251Q8N6I4 163 aa13.36□□□□□ -0.27
HMGN1-208ENST00000443046 ARMC2Q8NEN0 867 aa13.36□□□□□ -0.27
HMGN1-208ENST00000443046 OR56A3Q8NH54 315 aa13.36□□□□□ -0.27
HMGN1-208ENST00000443046 NCLNQ969V3 563 aa13.36□□□□□ -0.27
HMGN1-208ENST00000443046 C18orf12Q96KH6 178 aa13.36□□□□□ -0.27
HMGN1-208ENST00000443046 OR4K3Q96R72 315 aa13.36□□□□□ -0.27
HMGN1-208ENST00000443046 TSGA10Q9BZW7 698 aa13.36□□□□□ -0.27
HMGN1-208ENST00000443046 FBXO6Q9NRD1 293 aaPredicted RBP13.36□□□□□ -0.27
HMGN1-208ENST00000443046 CBLCQ9ULV8 474 aa13.36□□□□□ -0.27
HMGN1-208ENST00000443046 ERVK-11Q9UQG0 969 aa13.36□□□□□ -0.27
HMGN1-208ENST00000443046 MMACHCQ9Y4U1 282 aa13.36□□□□□ -0.27
HMGN1-208ENST00000443046 ATRQ13535 2644 aa13.35□□□□□ -0.27
HMGN1-208ENST00000443046 TLN2Q9Y4G6 2542 aa13.35□□□□□ -0.27
HMGN1-208ENST00000443046 ZCWPW2A0A1B0GU75 182 aa13.35□□□□□ -0.27
HMGN1-208ENST00000443046 CTAGE9A4FU28 777 aa13.35□□□□□ -0.27
HMGN1-208ENST00000443046 A8MVJ9 347 aa13.35□□□□□ -0.27
HMGN1-208ENST00000443046 C4orf51C9J302 202 aa13.35□□□□□ -0.27
HMGN1-208ENST00000443046 TGFBR3LH3BV60 316 aa13.35□□□□□ -0.27
HMGN1-208ENST00000443046 SLC16A5O15375 505 aa13.35□□□□□ -0.27
HMGN1-208ENST00000443046 OR2J2O76002 312 aa13.35□□□□□ -0.27
HMGN1-208ENST00000443046 ZFAND5O76080 213 aa13.35□□□□□ -0.27
HMGN1-208ENST00000443046 OR6B1O95007 311 aa13.35□□□□□ -0.27
HMGN1-208ENST00000443046 PAMP19021 973 aa13.35□□□□□ -0.27
HMGN1-208ENST00000443046 CNR1P21554 472 aa13.35□□□□□ -0.27
HMGN1-208ENST00000443046 MAGEA6P43360 314 aa13.35□□□□□ -0.27
HMGN1-208ENST00000443046 PLGLB1Q02325 96 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms