RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 QRFPRQ96P65 431 aa11.66□□□□□ -0.54
USP1-203ENST00000442679 KCNC2Q96PR1 638 aa11.66□□□□□ -0.54
USP1-203ENST00000442679 CENPKQ9BS16 269 aa11.66□□□□□ -0.54
USP1-203ENST00000442679 TBCDQ9BTW9 1192 aa11.66□□□□□ -0.54
USP1-203ENST00000442679 CRB3Q9BUF7 120 aa11.66□□□□□ -0.54
USP1-203ENST00000442679 OR51B5Q9H339 312 aa11.66□□□□□ -0.54
USP1-203ENST00000442679 ELOVL6Q9H5J4 265 aa11.66□□□□□ -0.54
USP1-203ENST00000442679 CLK4Q9HAZ1 481 aaKnown RBP11.66□□□□□ -0.54
USP1-203ENST00000442679 TMBIM4Q9HC24 238 aa11.66□□□□□ -0.54
USP1-203ENST00000442679 DMRT3Q9NQL9 472 aa11.66□□□□□ -0.54
USP1-203ENST00000442679 C14orf105Q9NVL8 296 aa11.66□□□□□ -0.54
USP1-203ENST00000442679 PSD3Q9NYI0 1048 aa11.66□□□□□ -0.54
USP1-203ENST00000442679 C3orf18Q9UK00 162 aa11.66□□□□□ -0.54
USP1-203ENST00000442679 SNX6Q9UNH7 406 aa11.66□□□□□ -0.54
USP1-203ENST00000442679 POLHQ9Y253 713 aa11.66□□□□□ -0.54
USP1-203ENST00000442679 IDSB3KWA1 339 aa11.65□□□□□ -0.54
USP1-203ENST00000442679 UBFD1O14562 309 aaKnown RBP11.65□□□□□ -0.54
USP1-203ENST00000442679 B3GALT2O43825 422 aa11.65□□□□□ -0.54
USP1-203ENST00000442679 JRKO75564 520 aa11.65□□□□□ -0.54
USP1-203ENST00000442679 IGHEP01854 428 aa11.65□□□□□ -0.54
USP1-203ENST00000442679 ITGB2P05107 769 aa11.65□□□□□ -0.54
USP1-203ENST00000442679 HEXBP07686 556 aa11.65□□□□□ -0.54
USP1-203ENST00000442679 IL10P22301 178 aa11.65□□□□□ -0.54
USP1-203ENST00000442679 ETV4P43268 484 aa11.65□□□□□ -0.54
USP1-203ENST00000442679 CCR10P46092 362 aa11.65□□□□□ -0.54
USP1-203ENST00000442679 RAP1GDS1P52306 607 aa11.65□□□□□ -0.54
USP1-203ENST00000442679 EMP2P54851 167 aa11.65□□□□□ -0.54
USP1-203ENST00000442679 RHDQ02161 417 aa11.65□□□□□ -0.54
USP1-203ENST00000442679 AP5B1Q2VPB7 878 aa11.65□□□□□ -0.54
USP1-203ENST00000442679 C10orf62Q5T681 223 aaPredicted RBP11.65□□□□□ -0.54
USP1-203ENST00000442679 MFSD4BQ5TF39 518 aa11.65□□□□□ -0.54
USP1-203ENST00000442679 PPP1R32Q7Z5V6 425 aa11.65□□□□□ -0.54
USP1-203ENST00000442679 CA13Q8N1Q1 262 aa11.65□□□□□ -0.54
USP1-203ENST00000442679 METTL6Q8TCB7 284 aa11.65□□□□□ -0.54
USP1-203ENST00000442679 AGAP11Q8TF27 550 aa11.65□□□□□ -0.54
USP1-203ENST00000442679 SREK1Q8WXA9 508 aaKnown RBP11.65□□□□□ -0.54
USP1-203ENST00000442679 EXTL1Q92935 676 aa11.65□□□□□ -0.54
USP1-203ENST00000442679 RGMAQ96B86 450 aa11.65□□□□□ -0.54
USP1-203ENST00000442679 PEX11GQ96HA9 241 aa11.65□□□□□ -0.54
USP1-203ENST00000442679 IP6K3Q96PC2 410 aa11.65□□□□□ -0.54
USP1-203ENST00000442679 SERINC2Q96SA4 455 aa11.65□□□□□ -0.54
USP1-203ENST00000442679 MECRQ9BV79 373 aa11.65□□□□□ -0.54
USP1-203ENST00000442679 GATA5Q9BWX5 397 aaPredicted RBP11.65□□□□□ -0.54
USP1-203ENST00000442679 NPLQ9BXD5 320 aaPredicted RBP11.65□□□□□ -0.54
USP1-203ENST00000442679 SLC29A3Q9BZD2 475 aa11.65□□□□□ -0.54
USP1-203ENST00000442679 ROGDIQ9GZN7 287 aa11.65□□□□□ -0.54
USP1-203ENST00000442679 COPS7BQ9H9Q2 264 aaPredicted RBP11.65□□□□□ -0.54
USP1-203ENST00000442679 MID1IP1Q9NPA3 183 aa11.65□□□□□ -0.54
USP1-203ENST00000442679 PRDM7Q9NQW5 492 aa11.65□□□□□ -0.54
USP1-203ENST00000442679 SEMA3GQ9NS98 782 aa11.65□□□□□ -0.54
USP1-203ENST00000442679 MKL2Q9ULH7 1088 aa11.65□□□□□ -0.54
USP1-203ENST00000442679 MAN2B2Q9Y2E5 1009 aa11.65□□□□□ -0.54
USP1-203ENST00000442679 MDC1Q14676 2089 aaKnown RBP11.64□□□□□ -0.55
USP1-203ENST00000442679 AGPSO00116 658 aa11.64□□□□□ -0.55
USP1-203ENST00000442679 PSMD12O00232 456 aaPredicted RBP11.64□□□□□ -0.55
USP1-203ENST00000442679 RTCAO00442 366 aaKnown RBP11.64□□□□□ -0.55
USP1-203ENST00000442679 MANBAO00462 879 aa11.64□□□□□ -0.55
USP1-203ENST00000442679 PEX12O00623 359 aa11.64□□□□□ -0.55
USP1-203ENST00000442679 TM9SF1O15321 606 aa11.64□□□□□ -0.55
USP1-203ENST00000442679 ESRRBO95718 433 aa11.64□□□□□ -0.55
USP1-203ENST00000442679 PDYNP01213 254 aa11.64□□□□□ -0.55
USP1-203ENST00000442679 KRT6AP02538 564 aa11.64□□□□□ -0.55
USP1-203ENST00000442679 KRT6BP04259 564 aa11.64□□□□□ -0.55
USP1-203ENST00000442679 ENO1P06733 434 aaKnown RBP11.64□□□□□ -0.55
USP1-203ENST00000442679 BPGMP07738 259 aa11.64□□□□□ -0.55
USP1-203ENST00000442679 RNH1P13489 461 aaKnown RBP11.64□□□□□ -0.55
USP1-203ENST00000442679 MMP11P24347 488 aa11.64□□□□□ -0.55
USP1-203ENST00000442679 ATP5A1P25705 553 aaKnown RBP11.64□□□□□ -0.55
USP1-203ENST00000442679 CERS1P27544 350 aa11.64□□□□□ -0.55
USP1-203ENST00000442679 HMOX2P30519 316 aa11.64□□□□□ -0.55
USP1-203ENST00000442679 KRT6CP48668 564 aa11.64□□□□□ -0.55
USP1-203ENST00000442679 MTTPP55157 894 aa11.64□□□□□ -0.55
USP1-203ENST00000442679 MAGOHP61326 146 aaKnown RBP11.64□□□□□ -0.55
USP1-203ENST00000442679 CUL3Q13618 768 aa11.64□□□□□ -0.55
USP1-203ENST00000442679 ATP1A4Q13733 1029 aa11.64□□□□□ -0.55
USP1-203ENST00000442679 RUNX2Q13950 521 aa11.64□□□□□ -0.55
USP1-203ENST00000442679 MPP2Q14168 576 aa11.64□□□□□ -0.55
USP1-203ENST00000442679 MINDY4Q4G0A6 757 aa11.64□□□□□ -0.55
USP1-203ENST00000442679 FAM219BQ5XKK7 198 aa11.64□□□□□ -0.55
USP1-203ENST00000442679 OR4C11Q6IEV9 310 aa11.64□□□□□ -0.55
USP1-203ENST00000442679 BORAQ6PGQ7 559 aa11.64□□□□□ -0.55
USP1-203ENST00000442679 MRGPREQ86SM8 312 aa11.64□□□□□ -0.55
USP1-203ENST00000442679 NUDCD3Q8IVD9 361 aa11.64□□□□□ -0.55
USP1-203ENST00000442679 APOBEC4Q8WW27 367 aaKnown RBP11.64□□□□□ -0.55
USP1-203ENST00000442679 SELENOMQ8WWX9 145 aa11.64□□□□□ -0.55
USP1-203ENST00000442679 NACC2Q96BF6 587 aa11.64□□□□□ -0.55
USP1-203ENST00000442679 TBC1D20Q96BZ9 403 aa11.64□□□□□ -0.55
USP1-203ENST00000442679 CNDP1Q96KN2 507 aa11.64□□□□□ -0.55
USP1-203ENST00000442679 OR1F2PQ96R84 312 aa11.64□□□□□ -0.55
USP1-203ENST00000442679 SERPINI1Q99574 410 aa11.64□□□□□ -0.55
USP1-203ENST00000442679 RBCK1Q9BYM8 510 aa11.64□□□□□ -0.55
USP1-203ENST00000442679 SHCBP1LQ9BZQ2 653 aa11.64□□□□□ -0.55
USP1-203ENST00000442679 FARSBQ9NSD9 589 aaKnown RBP11.64□□□□□ -0.55
USP1-203ENST00000442679 PPT2Q9UMR5 302 aa11.64□□□□□ -0.55
USP1-203ENST00000442679 WDR91A4D1P6 747 aa11.63□□□□□ -0.55
USP1-203ENST00000442679 OR2W5A6NFC9 320 aa11.63□□□□□ -0.55
USP1-203ENST00000442679 ARGFXA6NJG6 315 aa11.63□□□□□ -0.55
USP1-203ENST00000442679 FAM227AF5H4B4 570 aa11.63□□□□□ -0.55
USP1-203ENST00000442679 H3BQF6 201 aa11.63□□□□□ -0.55
USP1-203ENST00000442679 PLPP1O14494 284 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms