RNA–Protein interactions for RNA: ENST00000439986.8

CCBE1-202, Transcript of collagen and calcium binding EGF domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCBE1, Length 6,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-202ENST00000439986 CST11Q9H112 138 aa11.22□□□□□ -0.61
CCBE1-202ENST00000439986 VCX2Q9H322 139 aa11.22□□□□□ -0.61
CCBE1-202ENST00000439986 C17orf113A0A1B0GUU1 675 aa11.22□□□□□ -0.61
CCBE1-202ENST00000439986 BHLHE40O14503 412 aa11.22□□□□□ -0.61
CCBE1-202ENST00000439986 ASGR1P07306 291 aa11.22□□□□□ -0.61
CCBE1-202ENST00000439986 CDH1P12830 882 aa11.22□□□□□ -0.61
CCBE1-202ENST00000439986 FAUP35544 74 aaKnown RBP11.22□□□□□ -0.61
CCBE1-202ENST00000439986 FAM92BQ6ZTR7 304 aa11.22□□□□□ -0.61
CCBE1-202ENST00000439986 SLC51BQ86UW2 128 aa11.22□□□□□ -0.61
CCBE1-202ENST00000439986 ZZZ3Q8IYH5 903 aa11.22□□□□□ -0.61
CCBE1-202ENST00000439986 TMBIM1Q969X1 311 aa11.22□□□□□ -0.61
CCBE1-202ENST00000439986 ZBTB8AQ96BR9 441 aa11.22□□□□□ -0.61
CCBE1-202ENST00000439986 FAM234BA2RU67 622 aa11.22□□□□□ -0.61
CCBE1-202ENST00000439986 SRCP12931 536 aa11.22□□□□□ -0.61
CCBE1-202ENST00000439986 PGAM2P15259 253 aa11.22□□□□□ -0.61
CCBE1-202ENST00000439986 ZNF182P17025 639 aaPredicted RBP11.22□□□□□ -0.61
CCBE1-202ENST00000439986 TIE1P35590 1138 aa11.22□□□□□ -0.61
CCBE1-202ENST00000439986 EIF1AXP47813 144 aaKnown RBP11.22□□□□□ -0.61
CCBE1-202ENST00000439986 WNT7BP56706 349 aa11.22□□□□□ -0.61
CCBE1-202ENST00000439986 CACNG1Q06432 222 aa11.22□□□□□ -0.61
CCBE1-202ENST00000439986 RABL3Q5HYI8 236 aa11.22□□□□□ -0.61
CCBE1-202ENST00000439986 CENPSQ8N2Z9 138 aa11.22□□□□□ -0.61
CCBE1-202ENST00000439986 HDDC3Q8N4P3 179 aa11.22□□□□□ -0.61
CCBE1-202ENST00000439986 CENPMQ9NSP4 180 aa11.22□□□□□ -0.61
CCBE1-202ENST00000439986 HCRTO43612 131 aa11.22□□□□□ -0.61
CCBE1-202ENST00000439986 RPIAP49247 311 aa11.22□□□□□ -0.61
CCBE1-202ENST00000439986 PPP3R1P63098 170 aa11.22□□□□□ -0.61
CCBE1-202ENST00000439986 ARSJQ5FYB0 599 aaPredicted RBP11.22□□□□□ -0.61
CCBE1-202ENST00000439986 MED27Q6P2C8 311 aa11.22□□□□□ -0.61
CCBE1-202ENST00000439986 CLEC20AQ6ZU45 233 aa11.22□□□□□ -0.61
CCBE1-202ENST00000439986 SERPINA9Q86WD7 417 aa11.22□□□□□ -0.61
CCBE1-202ENST00000439986 BTN2A3PQ96KV6 586 aa11.22□□□□□ -0.61
CCBE1-202ENST00000439986 OR2M4Q96R27 311 aa11.22□□□□□ -0.61
CCBE1-202ENST00000439986 COPS7AQ9UBW8 275 aa11.22□□□□□ -0.61
CCBE1-202ENST00000439986 CFAP20Q9Y6A4 193 aaKnown RBP11.22□□□□□ -0.61
CCBE1-202ENST00000439986 MYH3P11055 1940 aa11.22□□□□□ -0.61
CCBE1-202ENST00000439986 PLSCR1O15162 318 aa11.22□□□□□ -0.61
CCBE1-202ENST00000439986 HTR7P34969 479 aa11.22□□□□□ -0.61
CCBE1-202ENST00000439986 RNF144AP50876 292 aaPredicted RBP11.22□□□□□ -0.61
CCBE1-202ENST00000439986 GAS6Q14393 721 aa11.22□□□□□ -0.61
CCBE1-202ENST00000439986 HACD4Q5VWC8 232 aa11.22□□□□□ -0.61
CCBE1-202ENST00000439986 ZCCHC12Q6PEW1 402 aa11.22□□□□□ -0.61
CCBE1-202ENST00000439986 OR2AJ1Q8NGZ0 328 aa11.22□□□□□ -0.61
CCBE1-202ENST00000439986 PSMG2Q969U7 264 aa11.22□□□□□ -0.61
CCBE1-202ENST00000439986 B3GNT4Q9C0J1 378 aa11.22□□□□□ -0.61
CCBE1-202ENST00000439986 SRMSQ9H3Y6 488 aa11.22□□□□□ -0.61
CCBE1-202ENST00000439986 GIMAP2Q9UG22 337 aa11.22□□□□□ -0.61
CCBE1-202ENST00000439986 ZNF142P52746 1687 aaPredicted RBP11.21□□□□□ -0.61
CCBE1-202ENST00000439986 SMIM35A0A1B0GVV1 85 aa11.21□□□□□ -0.61
CCBE1-202ENST00000439986 PRH1P02810 166 aa11.21□□□□□ -0.61
CCBE1-202ENST00000439986 CFIP05156 583 aa11.21□□□□□ -0.61
CCBE1-202ENST00000439986 SULT2A1Q06520 285 aa11.21□□□□□ -0.61
CCBE1-202ENST00000439986 INCA1Q0VD86 236 aa11.21□□□□□ -0.61
CCBE1-202ENST00000439986 RBM48Q5RL73 367 aaKnown RBP11.21□□□□□ -0.61
CCBE1-202ENST00000439986 HFE2Q6ZVN8 426 aa11.21□□□□□ -0.61
CCBE1-202ENST00000439986 ZDHHC21Q8IVQ6 265 aa11.21□□□□□ -0.61
CCBE1-202ENST00000439986 CPNE9Q8IYJ1 553 aa11.21□□□□□ -0.61
CCBE1-202ENST00000439986 FNDC8Q8TC99 324 aa11.21□□□□□ -0.61
CCBE1-202ENST00000439986 FCRL3Q96P31 734 aaPredicted RBP11.21□□□□□ -0.61
CCBE1-202ENST00000439986 ZNF416Q9BWM5 594 aa11.21□□□□□ -0.61
CCBE1-202ENST00000439986 ADAM10O14672 748 aa11.21□□□□□ -0.61
CCBE1-202ENST00000439986 HLA-DQB2P05538 268 aa11.21□□□□□ -0.61
CCBE1-202ENST00000439986 SDC2P34741 201 aa11.21□□□□□ -0.61
CCBE1-202ENST00000439986 PAFAH1B3Q15102 231 aaKnown RBP11.21□□□□□ -0.61
CCBE1-202ENST00000439986 PPP1R3AQ16821 1122 aa11.21□□□□□ -0.61
CCBE1-202ENST00000439986 PARP15Q460N3 678 aa11.21□□□□□ -0.61
CCBE1-202ENST00000439986 OR2D3Q8NGH3 330 aa11.21□□□□□ -0.61
CCBE1-202ENST00000439986 NUDT4Q9NZJ9 180 aa11.21□□□□□ -0.61
CCBE1-202ENST00000439986 MAU2Q9Y6X3 613 aa11.21□□□□□ -0.61
CCBE1-202ENST00000439986 GABRDO14764 452 aa11.21□□□□□ -0.61
CCBE1-202ENST00000439986 MID1O15344 667 aa11.21□□□□□ -0.61
CCBE1-202ENST00000439986 CLPXO76031 633 aa11.21□□□□□ -0.61
CCBE1-202ENST00000439986 PLGP00747 810 aaPredicted RBP11.21□□□□□ -0.61
CCBE1-202ENST00000439986 FMO3P31513 532 aa11.21□□□□□ -0.61
CCBE1-202ENST00000439986 RAB31Q13636 194 aa11.21□□□□□ -0.61
CCBE1-202ENST00000439986 RHEBQ15382 184 aa11.21□□□□□ -0.61
CCBE1-202ENST00000439986 ODF4Q2M2E3 257 aa11.21□□□□□ -0.61
CCBE1-202ENST00000439986 RAB6CQ53S08 254 aa11.21□□□□□ -0.61
CCBE1-202ENST00000439986 SLC2A7Q6PXP3 512 aa11.21□□□□□ -0.61
CCBE1-202ENST00000439986 RASGRP3Q8IV61 690 aa11.21□□□□□ -0.61
CCBE1-202ENST00000439986 TXNDC5Q8NBS9 432 aaKnown RBP11.21□□□□□ -0.61
CCBE1-202ENST00000439986 ASB15Q8WXK1 588 aa11.21□□□□□ -0.61
CCBE1-202ENST00000439986 HERVK_113Q902F9 699 aa11.21□□□□□ -0.61
CCBE1-202ENST00000439986 NR4A3Q92570 626 aa11.21□□□□□ -0.61
CCBE1-202ENST00000439986 RAB6CQ9H0N0 254 aa11.21□□□□□ -0.61
CCBE1-202ENST00000439986 TMEM9Q9P0T7 183 aa11.21□□□□□ -0.61
CCBE1-202ENST00000439986 ASB3Q9Y575 518 aa11.21□□□□□ -0.61
CCBE1-202ENST00000439986 MYH13Q9UKX3 1938 aa11.21□□□□□ -0.62
CCBE1-202ENST00000439986 LOC100509620A0A075B734 347 aa11.21□□□□□ -0.62
CCBE1-202ENST00000439986 EIF1AYO14602 144 aaKnown RBP11.21□□□□□ -0.62
CCBE1-202ENST00000439986 SLC22A1O15245 554 aa11.21□□□□□ -0.62
CCBE1-202ENST00000439986 PLGLB1Q02325 96 aa11.21□□□□□ -0.62
CCBE1-202ENST00000439986 DNASE1L3Q13609 305 aa11.21□□□□□ -0.62
CCBE1-202ENST00000439986 GDF6Q6KF10 455 aaPredicted RBP11.21□□□□□ -0.62
CCBE1-202ENST00000439986 METTL3Q86U44 580 aaKnown RBP11.21□□□□□ -0.62
CCBE1-202ENST00000439986 ZNF611Q8N823 705 aa11.21□□□□□ -0.62
CCBE1-202ENST00000439986 CAMKVQ8NCB2 501 aa11.21□□□□□ -0.62
CCBE1-202ENST00000439986 LILRB4Q8NHJ6 448 aa11.21□□□□□ -0.62
CCBE1-202ENST00000439986 TMEM74Q96NL1 305 aa11.21□□□□□ -0.62
CCBE1-202ENST00000439986 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms