RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 PDHA2P29803 388 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 TRIM23P36406 574 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 LIMK1P53667 647 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 TMBIM6P55061 237 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 FOXA1P55317 472 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 GFERP55789 205 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 CLDN8P56748 225 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 ERVPABLB-1P60509 514 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 TEKQ02763 1124 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 GTF2H3Q13889 308 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 E2F2Q14209 437 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 KCNAB1Q14722 419 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 CYP51A1Q16850 503 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 PYCR3Q53H96 274 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 C6orf132Q5T0Z8 1188 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 HENMT1Q5T8I9 393 aaKnown RBP4.56□□□□□ -1.68
EDEM3-203ENST00000439962 THEMIS2Q5TEJ8 643 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 PRAMEF17Q5VTA0 474 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 FAM69BQ5VUD6 431 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 FAM83HQ6ZRV2 1179 aaPredicted RBP4.56□□□□□ -1.68
EDEM3-203ENST00000439962 GPR141Q7Z602 305 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 MILR1Q7Z6M3 343 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 IQCHQ86VS3 1027 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 CALHM3Q86XJ0 350 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 NRROSQ86YC3 692 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 ZNF547Q8IVP9 402 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 NXPE1Q8N323 547 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 ARL14Q8N4G2 192 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 METTL25Q8N6Q8 603 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 RASGEF1AQ8N9B8 481 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 FNDC5Q8NAU1 212 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 SIDT2Q8NBJ9 832 aaKnown RBP4.56□□□□□ -1.68
EDEM3-203ENST00000439962 FBXO15Q8NCQ5 510 aaPredicted RBP4.56□□□□□ -1.68
EDEM3-203ENST00000439962 SLC13A3Q8WWT9 602 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 HDAC2Q92769 488 aaKnown RBP4.56□□□□□ -1.68
EDEM3-203ENST00000439962 SDCCAG3Q96C92 435 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 RHBDF1Q96CC6 855 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 CMTM7Q96FZ5 175 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 GFM1Q96RP9 751 aaKnown RBP4.56□□□□□ -1.68
EDEM3-203ENST00000439962 CCDC86Q9H6F5 360 aaKnown RBP4.56□□□□□ -1.68
EDEM3-203ENST00000439962 NLGN3Q9NZ94 848 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 IFT80Q9P2H3 777 aaPredicted RBP4.56□□□□□ -1.68
EDEM3-203ENST00000439962 SNX6Q9UNH7 406 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 KLHL20Q9Y2M5 609 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 FIS1Q9Y3D6 152 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 TSC22D4Q9Y3Q8 395 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 LY6G6EA0A0G2JKS1 128 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 DLGAP1O14490 977 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 BRINP1O60477 761 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 NIPSNAP2O75323 286 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 TRMUO75648 421 aaKnown RBP4.56□□□□□ -1.68
EDEM3-203ENST00000439962 OR4F21O95013 312 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 TNFSF15O95150 251 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 VIPP01282 170 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 OR56A5P0C7T3 313 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 ITGAMP11215 1152 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 EPB42P16452 691 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 HOXB9P17482 250 aaPredicted RBP4.56□□□□□ -1.68
EDEM3-203ENST00000439962 CXCR4P61073 352 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 YPEL5P62699 121 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 CHRNB3Q05901 458 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 ABHD18Q0P651 414 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 DAG1Q14118 895 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 CLCA4Q14CN2 919 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.56□□□□□ -1.68
EDEM3-203ENST00000439962 RUNDC3AQ59EK9 446 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 LIPJQ5W064 366 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 TTC33Q6PID6 262 aaPredicted RBP4.56□□□□□ -1.68
EDEM3-203ENST00000439962 CAMKMTQ7Z624 323 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 SERPINA11Q86U17 422 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 VASH2Q86V25 355 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 SERPINA9Q86WD7 417 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 HIPK1Q86Z02 1210 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 EPHX4Q8IUS5 362 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 CPNE9Q8IYJ1 553 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 SFRP1Q8N474 314 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 EFCAB3Q8N7B9 438 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 ARL10Q8N8L6 244 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 OR4F6Q8NGB9 312 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 OR4E2Q8NGC2 313 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 OR9I1Q8NGQ6 314 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 OR2T11Q8NH01 316 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 BTN2A2Q8WVV5 523 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 ATL1Q8WXF7 558 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 FAM131CQ96AQ9 280 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 ITCHQ96J02 903 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 C12orf66Q96MD2 445 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 NSUN5Q96P11 429 aaKnown RBP4.56□□□□□ -1.68
EDEM3-203ENST00000439962 CIB1Q99828 191 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 RBM4BQ9BQ04 359 aaKnown RBP4.56□□□□□ -1.68
EDEM3-203ENST00000439962 DUSP23Q9BVJ7 150 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 ACAT2Q9BWD1 397 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 RBM4Q9BWF3 364 aaKnown RBP4.56□□□□□ -1.68
EDEM3-203ENST00000439962 SLC12A9Q9BXP2 914 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 GSDMCQ9BYG8 508 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 SLC24A3Q9HC58 644 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 TBCCD1Q9NVR7 557 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 IRAK4Q9NWZ3 460 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 C1orf109Q9NX04 203 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 GPRC5BQ9NZH0 403 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms