RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 FAM157CP0CG43 387 aa2.91□□□□□ -1.94
HMGB3P12-201ENST00000438745 STAG3L1P0CL83 205 aa2.91□□□□□ -1.94
HMGB3P12-201ENST00000438745 IGHV4-31P0DP07 118 aa2.91□□□□□ -1.94
HMGB3P12-201ENST00000438745 SCG2P13521 617 aa2.91□□□□□ -1.94
HMGB3P12-201ENST00000438745 EPCAMP16422 314 aa2.91□□□□□ -1.94
HMGB3P12-201ENST00000438745 LBPP18428 481 aa2.91□□□□□ -1.94
HMGB3P12-201ENST00000438745 LHCGRP22888 699 aa2.91□□□□□ -1.94
HMGB3P12-201ENST00000438745 HSD17B3P37058 310 aa2.91□□□□□ -1.94
HMGB3P12-201ENST00000438745 MTCP1P56278 107 aa2.91□□□□□ -1.94
HMGB3P12-201ENST00000438745 IRX1P78414 480 aaPredicted RBP2.91□□□□□ -1.94
HMGB3P12-201ENST00000438745 TUBB2AQ13885 445 aa2.91□□□□□ -1.94
HMGB3P12-201ENST00000438745 ANGPT1Q15389 498 aa2.91□□□□□ -1.94
HMGB3P12-201ENST00000438745 CTU2Q2VPK5 515 aaKnown RBP2.91□□□□□ -1.94
HMGB3P12-201ENST00000438745 C6orf136Q5SQH8 315 aa2.91□□□□□ -1.94
HMGB3P12-201ENST00000438745 C20orf194Q5TEA3 1177 aa2.91□□□□□ -1.94
HMGB3P12-201ENST00000438745 MAML2Q8IZL2 1156 aaPredicted RBP2.91□□□□□ -1.94
HMGB3P12-201ENST00000438745 RYBPQ8N488 228 aaPredicted RBP2.91□□□□□ -1.94
HMGB3P12-201ENST00000438745 TMEM105Q8N8V8 129 aa2.91□□□□□ -1.94
HMGB3P12-201ENST00000438745 TMEM178AQ8NBL3 297 aa2.91□□□□□ -1.94
HMGB3P12-201ENST00000438745 OR10Q1Q8NGQ4 319 aa2.91□□□□□ -1.94
HMGB3P12-201ENST00000438745 OR13C3Q8NGS6 347 aa2.91□□□□□ -1.94
HMGB3P12-201ENST00000438745 OR52N5Q8NH56 324 aa2.91□□□□□ -1.94
HMGB3P12-201ENST00000438745 HEXDCQ8WVB3 486 aa2.91□□□□□ -1.94
HMGB3P12-201ENST00000438745 ST6GALNAC6Q969X2 333 aa2.91□□□□□ -1.94
HMGB3P12-201ENST00000438745 PRAC1Q96KF2 57 aa2.91□□□□□ -1.94
HMGB3P12-201ENST00000438745 TUBB2BQ9BVA1 445 aa2.91□□□□□ -1.94
HMGB3P12-201ENST00000438745 ZMYND12Q9H0C1 365 aa2.91□□□□□ -1.94
HMGB3P12-201ENST00000438745 SHARPINQ9H0F6 387 aa2.91□□□□□ -1.94
HMGB3P12-201ENST00000438745 TDRD3Q9H7E2 651 aaKnown RBP2.91□□□□□ -1.94
HMGB3P12-201ENST00000438745 Q9H8V8 135 aa2.91□□□□□ -1.94
HMGB3P12-201ENST00000438745 ZNF71Q9NQZ8 489 aaPredicted RBP2.91□□□□□ -1.94
HMGB3P12-201ENST00000438745 SNX7Q9UNH6 387 aa2.91□□□□□ -1.94
HMGB3P12-201ENST00000438745 R4GN57 208 aa2.91□□□□□ -1.94
HMGB3P12-201ENST00000438745 REV3LO60673 3130 aa2.91□□□□□ -1.94
HMGB3P12-201ENST00000438745 GVINP1Q7Z2Y8 2422 aa2.91□□□□□ -1.94
HMGB3P12-201ENST00000438745 MROH7Q68CQ1 1323 aa2.91□□□□□ -1.94
HMGB3P12-201ENST00000438745 SALL1Q9NSC2 1324 aa2.91□□□□□ -1.94
HMGB3P12-201ENST00000438745 PRRC2BQ5JSZ5 2229 aaKnown RBP2.91□□□□□ -1.94
HMGB3P12-201ENST00000438745 SCN9AQ15858 1988 aa2.91□□□□□ -1.94
HMGB3P12-201ENST00000438745 MED23Q9ULK4 1368 aa2.9□□□□□ -1.94
HMGB3P12-201ENST00000438745 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.9□□□□□ -1.95
HMGB3P12-201ENST00000438745 A0A1B0GUL7 405 aa2.9□□□□□ -1.95
HMGB3P12-201ENST00000438745 ERI2A8K979 691 aaKnown RBP2.9□□□□□ -1.95
HMGB3P12-201ENST00000438745 CDC123O75794 336 aaPredicted RBP2.9□□□□□ -1.95
HMGB3P12-201ENST00000438745 TBX6O95947 436 aaPredicted RBP2.9□□□□□ -1.95
HMGB3P12-201ENST00000438745 CLPTM1O96005 669 aa2.9□□□□□ -1.95
HMGB3P12-201ENST00000438745 FAM58BPP0C7Q3 252 aa2.9□□□□□ -1.95
HMGB3P12-201ENST00000438745 CA6P23280 308 aa2.9□□□□□ -1.95
HMGB3P12-201ENST00000438745 HOXC13P31276 330 aa2.9□□□□□ -1.95
HMGB3P12-201ENST00000438745 VAMP7P51809 220 aa2.9□□□□□ -1.95
HMGB3P12-201ENST00000438745 MAZP56270 477 aaKnown RBP2.9□□□□□ -1.95
HMGB3P12-201ENST00000438745 DLK1P80370 383 aa2.9□□□□□ -1.95
HMGB3P12-201ENST00000438745 ILF2Q12905 390 aaKnown RBP2.9□□□□□ -1.95
HMGB3P12-201ENST00000438745 NPTX1Q15818 432 aa2.9□□□□□ -1.95
HMGB3P12-201ENST00000438745 MTHFSDQ2M296 383 aaKnown RBP2.9□□□□□ -1.95
HMGB3P12-201ENST00000438745 KRT71Q3SY84 523 aa2.9□□□□□ -1.95
HMGB3P12-201ENST00000438745 HSP90AB3PQ58FF7 597 aa2.9□□□□□ -1.95
HMGB3P12-201ENST00000438745 SLC35D3Q5M8T2 416 aa2.9□□□□□ -1.95
HMGB3P12-201ENST00000438745 MPP7Q5T2T1 576 aa2.9□□□□□ -1.95
HMGB3P12-201ENST00000438745 CTR9Q6PD62 1173 aa2.9□□□□□ -1.95
HMGB3P12-201ENST00000438745 MOXD1Q6UVY6 613 aa2.9□□□□□ -1.95
HMGB3P12-201ENST00000438745 SPATA19Q7Z5L4 167 aa2.9□□□□□ -1.95
HMGB3P12-201ENST00000438745 ABI3BPQ7Z7G0 1075 aa2.9□□□□□ -1.95
HMGB3P12-201ENST00000438745 CROCCP3Q8IVE0 287 aa2.9□□□□□ -1.95
HMGB3P12-201ENST00000438745 OR8H3Q8N146 312 aa2.9□□□□□ -1.95
HMGB3P12-201ENST00000438745 RASGEF1AQ8N9B8 481 aa2.9□□□□□ -1.95
HMGB3P12-201ENST00000438745 OR2T11Q8NH01 316 aa2.9□□□□□ -1.95
HMGB3P12-201ENST00000438745 GOT1L1Q8NHS2 421 aaPredicted RBP2.9□□□□□ -1.95
HMGB3P12-201ENST00000438745 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.9□□□□□ -1.95
HMGB3P12-201ENST00000438745 HPSE2Q8WWQ2 592 aa2.9□□□□□ -1.95
HMGB3P12-201ENST00000438745 SUSD6Q92537 303 aa2.9□□□□□ -1.95
HMGB3P12-201ENST00000438745 GIMAP5Q96F15 307 aa2.9□□□□□ -1.95
HMGB3P12-201ENST00000438745 BSCL2Q96G97 398 aaPredicted RBP2.9□□□□□ -1.95
HMGB3P12-201ENST00000438745 POM121L2Q96KW2 1035 aa2.9□□□□□ -1.95
HMGB3P12-201ENST00000438745 LINC00479Q96M42 142 aa2.9□□□□□ -1.95
HMGB3P12-201ENST00000438745 EGFL8Q99944 293 aa2.9□□□□□ -1.95
HMGB3P12-201ENST00000438745 CITED2Q99967 270 aaPredicted RBP2.9□□□□□ -1.95
HMGB3P12-201ENST00000438745 PANK2Q9BZ23 570 aa2.9□□□□□ -1.95
HMGB3P12-201ENST00000438745 TRPV4Q9HBA0 871 aa2.9□□□□□ -1.95
HMGB3P12-201ENST00000438745 FGF22Q9HCT0 170 aa2.9□□□□□ -1.95
HMGB3P12-201ENST00000438745 PPANQ9NQ55 473 aaKnown RBP2.9□□□□□ -1.95
HMGB3P12-201ENST00000438745 GSN-AS1Q9NRJ2 163 aa2.9□□□□□ -1.95
HMGB3P12-201ENST00000438745 FLRT3Q9NZU0 649 aa2.9□□□□□ -1.95
HMGB3P12-201ENST00000438745 CTNNA3Q9UI47 895 aa2.9□□□□□ -1.95
HMGB3P12-201ENST00000438745 AGTPBP1Q9UPW5 1226 aa2.9□□□□□ -1.95
HMGB3P12-201ENST00000438745 CHKBQ9Y259 395 aa2.9□□□□□ -1.95
HMGB3P12-201ENST00000438745 MRPS28Q9Y2Q9 187 aaKnown RBP2.9□□□□□ -1.95
HMGB3P12-201ENST00000438745 PYGO1Q9Y3Y4 419 aa2.9□□□□□ -1.95
HMGB3P12-201ENST00000438745 ZHX2Q9Y6X8 837 aa2.9□□□□□ -1.95
HMGB3P12-201ENST00000438745 CACNA1HO95180 2353 aa2.9□□□□□ -1.95
HMGB3P12-201ENST00000438745 OTOFQ9HC10 1997 aa2.9□□□□□ -1.95
HMGB3P12-201ENST00000438745 MYO9BQ13459 2157 aa2.9□□□□□ -1.95
HMGB3P12-201ENST00000438745 GCN1Q92616 2671 aaKnown RBP2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 USP9XQ93008 2570 aaPredicted RBP2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 LRRC37AA6NMS7 1700 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 SLCO1B7G3V0H7 640 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 CCDC188H7C350 402 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 EPHB6O15197 1021 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 MGAMO43451 1857 aa2.89□□□□□ -1.95
HMGB3P12-201ENST00000438745 MBTPS2O43462 519 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 214.1 ms