RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 COG4Q9H9E3 785 aa3.43□□□□□ -1.86
HMGB1P12-201ENST00000438594 SGK2Q9HBY8 427 aa3.43□□□□□ -1.86
HMGB1P12-201ENST00000438594 ZNF160Q9HCG1 818 aa3.43□□□□□ -1.86
HMGB1P12-201ENST00000438594 PDGFCQ9NRA1 345 aa3.43□□□□□ -1.86
HMGB1P12-201ENST00000438594 PNO1Q9NRX1 252 aaKnown RBP3.43□□□□□ -1.86
HMGB1P12-201ENST00000438594 MRPL22Q9NWU5 206 aaKnown RBP3.43□□□□□ -1.86
HMGB1P12-201ENST00000438594 TAS2R14Q9NYV8 317 aa3.43□□□□□ -1.86
HMGB1P12-201ENST00000438594 SENP1Q9P0U3 644 aa3.43□□□□□ -1.86
HMGB1P12-201ENST00000438594 RCOR3Q9P2K3 495 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P12-201ENST00000438594 RHCGQ9UBD6 479 aa3.43□□□□□ -1.86
HMGB1P12-201ENST00000438594 RNF14Q9UBS8 474 aa3.43□□□□□ -1.86
HMGB1P12-201ENST00000438594 SEC14L3Q9UDX4 400 aa3.43□□□□□ -1.86
HMGB1P12-201ENST00000438594 SLC25A13Q9UJS0 675 aa3.43□□□□□ -1.86
HMGB1P12-201ENST00000438594 PCDHA7Q9UN72 937 aa3.43□□□□□ -1.86
HMGB1P12-201ENST00000438594 KCNJ14Q9UNX9 436 aa3.43□□□□□ -1.86
HMGB1P12-201ENST00000438594 SH3GLB1Q9Y371 365 aa3.43□□□□□ -1.86
HMGB1P12-201ENST00000438594 FAM96BQ9Y3D0 163 aa3.43□□□□□ -1.86
HMGB1P12-201ENST00000438594 FER1L4A9Z1Z3 1794 aa3.43□□□□□ -1.86
HMGB1P12-201ENST00000438594 CNTNAP2Q9UHC6 1331 aa3.43□□□□□ -1.86
HMGB1P12-201ENST00000438594 KANK1Q14678 1352 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 DISP3Q9P2K9 1392 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 TRAV26-1A0A087WT03 109 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 A0A087WUV0 522 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 A0A087X0K7 114 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 A0A1B0GUH1 482 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 A0A1W2PPQ1 181 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 A0A1W2PS29 197 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 ILVBLA1L0T0 632 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 OR6C68A6NDL8 312 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 TRPC5OSA6NMA1 111 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 F8W810 466 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 SCAMP2O15127 329 aaKnown RBP3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 FLRT2O43155 660 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 PJA2O43164 708 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 CHMP2AO43633 222 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 PRAMEF11O60813 436 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 SDC3O75056 442 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 JRKO75564 520 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 MT-CYBP00156 380 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 POMCP01189 267 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 CALCAP01258 141 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 CA3P07451 260 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 CELA2AP08217 269 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 PLEKP08567 350 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 RAB40ALP0C0E4 278 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 AKR1A1P14550 325 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 FOSL2P15408 326 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 MX1P20591 662 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 GCSHP23434 173 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 IL32P24001 234 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 ELAVL4P26378 380 aaKnown RBP3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 GSTM2P28161 218 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 PPIFP30405 207 aaKnown RBP3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 DCTDP32321 178 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 CRATP43155 626 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 GDI2P50395 445 aaKnown RBP3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 PPT1P50897 306 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 RAB9AP51151 201 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 CCNG1P51959 295 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 THOP1P52888 689 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 SOX10P56693 466 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 SEC61GP60059 68 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 YWHAGP61981 247 aaKnown RBP eCLIP3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 RAB11AP62491 216 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 IRX4P78413 519 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 MRPS34P82930 218 aaKnown RBP3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 PPP2R2BQ00005 443 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 BDH1Q02338 343 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 PLOD1Q02809 727 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 PMPCAQ10713 525 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 TROAPQ12815 778 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 FADDQ13158 208 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 DYRK1AQ13627 763 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 PIGHQ14442 188 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 KRT33BQ14525 404 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 CASP8Q14790 479 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 RAB11BQ15907 218 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 LY6KQ17RY6 165 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 MOGAT2Q3SYC2 334 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 AMZ1Q400G9 498 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 XKR7Q5GH72 579 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 MTX3Q5HYI7 312 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 RAET1LQ5VY80 246 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 PYHIN1Q6K0P9 492 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 LRRC8EQ6NSJ5 796 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 ZSCAN25Q6NSZ9 544 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 TMEM53Q6P2H8 277 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 ANKRD16Q6P6B7 361 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 FAM159AQ6UWV7 190 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 CYP4V2Q6ZWL3 525 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 NRARPQ7Z6K4 114 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 AMIGO2Q86SJ2 522 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 IGFN1Q86VF2 1251 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 VSTM4Q8IW00 320 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 STHQ8IWL8 128 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 LRRC8AQ8IWT6 810 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 SELENOHQ8IZQ5 122 aaKnown RBP3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 APCDD1Q8J025 514 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 FITM2Q8N6M3 262 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 GPRC5AQ8NFJ5 357 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms