RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 C2orf48Q96LS8 159 aa3.12□□□□□ -1.91
TRAPPC13-204ENST00000438419 AGAP3Q96P47 875 aa3.12□□□□□ -1.91
TRAPPC13-204ENST00000438419 RASL10BQ96S79 203 aa3.12□□□□□ -1.91
TRAPPC13-204ENST00000438419 PRMT1Q99873 361 aaKnown RBP3.12□□□□□ -1.91
TRAPPC13-204ENST00000438419 ACPTQ9BZG2 426 aa3.12□□□□□ -1.91
TRAPPC13-204ENST00000438419 THAP9Q9H5L6 903 aa3.12□□□□□ -1.91
TRAPPC13-204ENST00000438419 C5orf66Q9H5L9 145 aa3.12□□□□□ -1.91
TRAPPC13-204ENST00000438419 MRPL17Q9NRX2 175 aaKnown RBP3.12□□□□□ -1.91
TRAPPC13-204ENST00000438419 GPR173Q9NS66 373 aa3.12□□□□□ -1.91
TRAPPC13-204ENST00000438419 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.12□□□□□ -1.91
TRAPPC13-204ENST00000438419 PANK4Q9NVE7 773 aa3.12□□□□□ -1.91
TRAPPC13-204ENST00000438419 DNAJC11Q9NVH1 559 aa3.12□□□□□ -1.91
TRAPPC13-204ENST00000438419 TEX10Q9NXF1 929 aaPredicted RBP3.12□□□□□ -1.91
TRAPPC13-204ENST00000438419 HACD3Q9P035 362 aa3.12□□□□□ -1.91
TRAPPC13-204ENST00000438419 PILRBQ9UKJ0 227 aa3.12□□□□□ -1.91
TRAPPC13-204ENST00000438419 TMED7Q9Y3B3 224 aa3.12□□□□□ -1.91
TRAPPC13-204ENST00000438419 A0A087X0K7 114 aa3.11□□□□□ -1.91
TRAPPC13-204ENST00000438419 MAGEB16A2A368 324 aa3.11□□□□□ -1.91
TRAPPC13-204ENST00000438419 FAM149AA5PLN7 773 aa3.11□□□□□ -1.91
TRAPPC13-204ENST00000438419 KRTAP9-6A8MVA2 160 aa3.11□□□□□ -1.91
TRAPPC13-204ENST00000438419 A8MVM7 634 aa3.11□□□□□ -1.91
TRAPPC13-204ENST00000438419 SCO2O43819 266 aa3.11□□□□□ -1.91
TRAPPC13-204ENST00000438419 LETM1O95202 739 aaPredicted RBP3.11□□□□□ -1.91
TRAPPC13-204ENST00000438419 DUS4LO95620 317 aaKnown RBP3.11□□□□□ -1.91
TRAPPC13-204ENST00000438419 OLFM2O95897 454 aa3.11□□□□□ -1.91
TRAPPC13-204ENST00000438419 ZSCAN5DPP0CG00 497 aa3.11□□□□□ -1.91
TRAPPC13-204ENST00000438419 STMN1P16949 149 aa3.11□□□□□ -1.91
TRAPPC13-204ENST00000438419 UGT1A4P22310 534 aa3.11□□□□□ -1.91
TRAPPC13-204ENST00000438419 SRD5A2P31213 254 aa3.11□□□□□ -1.91
TRAPPC13-204ENST00000438419 OR3A3P47888 321 aa3.11□□□□□ -1.91
TRAPPC13-204ENST00000438419 NT5C2P49902 561 aa3.11□□□□□ -1.91
TRAPPC13-204ENST00000438419 UCP2P55851 309 aa3.11□□□□□ -1.91
TRAPPC13-204ENST00000438419 GFPT1Q06210 699 aaPredicted RBP3.11□□□□□ -1.91
TRAPPC13-204ENST00000438419 FASTKD3Q14CZ7 662 aaKnown RBP3.11□□□□□ -1.91
TRAPPC13-204ENST00000438419 HFEQ30201 348 aa3.11□□□□□ -1.91
TRAPPC13-204ENST00000438419 AGAP6Q5VW22 663 aa3.11□□□□□ -1.91
TRAPPC13-204ENST00000438419 KCTD11Q693B1 232 aa3.11□□□□□ -1.91
TRAPPC13-204ENST00000438419 PLBD1Q6P4A8 553 aa3.11□□□□□ -1.91
TRAPPC13-204ENST00000438419 DHRS11Q6UWP2 260 aa3.11□□□□□ -1.91
TRAPPC13-204ENST00000438419 METTL7BQ6UX53 244 aa3.11□□□□□ -1.91
TRAPPC13-204ENST00000438419 MACC1Q6ZN28 852 aa3.11□□□□□ -1.91
TRAPPC13-204ENST00000438419 TOM1L2Q6ZVM7 507 aa3.11□□□□□ -1.91
TRAPPC13-204ENST00000438419 STXBP4Q6ZWJ1 553 aa3.11□□□□□ -1.91
TRAPPC13-204ENST00000438419 TMEM126BQ8IUX1 230 aa3.11□□□□□ -1.91
TRAPPC13-204ENST00000438419 CNTN4Q8IWV2 1026 aa3.11□□□□□ -1.91
TRAPPC13-204ENST00000438419 THEM5Q8N1Q8 247 aa3.11□□□□□ -1.91
TRAPPC13-204ENST00000438419 CLEC1AQ8NC01 280 aa3.11□□□□□ -1.91
TRAPPC13-204ENST00000438419 NUP37Q8NFH4 326 aa3.11□□□□□ -1.91
TRAPPC13-204ENST00000438419 CCDC47Q96A33 483 aaKnown RBP3.11□□□□□ -1.91
TRAPPC13-204ENST00000438419 ZNF689Q96CS4 500 aaPredicted RBP3.11□□□□□ -1.91
TRAPPC13-204ENST00000438419 C5orf30Q96GV9 206 aa3.11□□□□□ -1.91
TRAPPC13-204ENST00000438419 TRIM15Q9C019 465 aa3.11□□□□□ -1.91
TRAPPC13-204ENST00000438419 NAPBQ9H115 298 aa3.11□□□□□ -1.91
TRAPPC13-204ENST00000438419 UPF3AQ9H1J1 476 aaKnown RBP3.11□□□□□ -1.91
TRAPPC13-204ENST00000438419 MTIF3Q9H2K0 278 aaKnown RBP3.11□□□□□ -1.91
TRAPPC13-204ENST00000438419 NDE1Q9NXR1 346 aa3.11□□□□□ -1.91
TRAPPC13-204ENST00000438419 ASIC3Q9UHC3 531 aa3.11□□□□□ -1.91
TRAPPC13-204ENST00000438419 LNPEPQ9UIQ6 1025 aa3.11□□□□□ -1.91
TRAPPC13-204ENST00000438419 MOSPD1Q9UJG1 213 aa3.11□□□□□ -1.91
TRAPPC13-204ENST00000438419 WIPI2Q9Y4P8 454 aa3.11□□□□□ -1.91
TRAPPC13-204ENST00000438419 RPGRIP1LQ68CZ1 1315 aa3.11□□□□□ -1.91
TRAPPC13-204ENST00000438419 SYCE3A1L190 88 aa3.1□□□□□ -1.91
TRAPPC13-204ENST00000438419 CCDC162PA2VCL2 907 aa3.1□□□□□ -1.91
TRAPPC13-204ENST00000438419 NKX6-3A6NJ46 265 aa3.1□□□□□ -1.91
TRAPPC13-204ENST00000438419 MPTX1A8MV57 137 aa3.1□□□□□ -1.91
TRAPPC13-204ENST00000438419 RTCAO00442 366 aaKnown RBP3.1□□□□□ -1.91
TRAPPC13-204ENST00000438419 VEGFDO43915 354 aa3.1□□□□□ -1.91
TRAPPC13-204ENST00000438419 GRAP2O75791 330 aa3.1□□□□□ -1.91
TRAPPC13-204ENST00000438419 MT-ND2P03891 347 aa3.1□□□□□ -1.91
TRAPPC13-204ENST00000438419 KRT3P12035 628 aa3.1□□□□□ -1.91
TRAPPC13-204ENST00000438419 MYOGP15173 224 aa3.1□□□□□ -1.91
TRAPPC13-204ENST00000438419 EZRP15311 586 aaKnown RBP3.1□□□□□ -1.91
TRAPPC13-204ENST00000438419 TMEM50BP56557 158 aa3.1□□□□□ -1.91
TRAPPC13-204ENST00000438419 YBEYP58557 167 aaPredicted RBP3.1□□□□□ -1.91
TRAPPC13-204ENST00000438419 RPP38P78345 283 aaKnown RBP3.1□□□□□ -1.91
TRAPPC13-204ENST00000438419 MTF1Q14872 753 aa3.1□□□□□ -1.91
TRAPPC13-204ENST00000438419 PPA1Q15181 289 aa3.1□□□□□ -1.91
TRAPPC13-204ENST00000438419 NECTIN1Q15223 517 aa3.1□□□□□ -1.91
TRAPPC13-204ENST00000438419 ATP1A1-AS1Q5TC04 95 aa3.1□□□□□ -1.91
TRAPPC13-204ENST00000438419 CES4AQ5XG92 561 aa3.1□□□□□ -1.91
TRAPPC13-204ENST00000438419 C17orf107Q6ZR85 190 aa3.1□□□□□ -1.91
TRAPPC13-204ENST00000438419 COX8CQ7Z4L0 72 aa3.1□□□□□ -1.91
TRAPPC13-204ENST00000438419 ZC3H3Q8IXZ2 948 aaKnown RBP3.1□□□□□ -1.91
TRAPPC13-204ENST00000438419 NEK11Q8NG66 645 aa3.1□□□□□ -1.91
TRAPPC13-204ENST00000438419 SAP25Q8TEE9 199 aa3.1□□□□□ -1.91
TRAPPC13-204ENST00000438419 TAF15Q92804 592 aaKnown RBP eCLIP3.1□□□□□ -1.91
TRAPPC13-204ENST00000438419 EPSTI1Q96J88 318 aa3.1□□□□□ -1.91
TRAPPC13-204ENST00000438419 PRAM1Q96QH2 718 aa3.1□□□□□ -1.91
TRAPPC13-204ENST00000438419 GAL3ST4Q96RP7 486 aa3.1□□□□□ -1.91
TRAPPC13-204ENST00000438419 ATP6V0BQ99437 205 aa3.1□□□□□ -1.91
TRAPPC13-204ENST00000438419 RBM4BQ9BQ04 359 aaKnown RBP3.1□□□□□ -1.91
TRAPPC13-204ENST00000438419 OVOL2Q9BRP0 275 aa3.1□□□□□ -1.91
TRAPPC13-204ENST00000438419 B3GAT2Q9NPZ5 323 aa3.1□□□□□ -1.91
TRAPPC13-204ENST00000438419 POLKQ9UBT6 870 aa3.1□□□□□ -1.91
TRAPPC13-204ENST00000438419 POMT2Q9UKY4 750 aa3.1□□□□□ -1.91
TRAPPC13-204ENST00000438419 ZNF510Q9Y2H8 683 aa3.1□□□□□ -1.91
TRAPPC13-204ENST00000438419 LOC105371242A0A075B767 164 aa3.1□□□□□ -1.91
TRAPPC13-204ENST00000438419 A0A087WZ39 114 aa3.1□□□□□ -1.91
TRAPPC13-204ENST00000438419 A0A1B0GU03 582 aa3.1□□□□□ -1.91
TRAPPC13-204ENST00000438419 MEX3AA1L020 520 aaKnown RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms