RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 CERS2Q96G23 380 aa13.2□□□□□ -0.3
LINC01088-201ENST00000437737 SEC16BQ96JE7 1060 aa13.2□□□□□ -0.3
LINC01088-201ENST00000437737 ZIM3Q96PE6 472 aa13.2□□□□□ -0.3
LINC01088-201ENST00000437737 WDR83Q9BRX9 315 aaKnown RBP13.2□□□□□ -0.3
LINC01088-201ENST00000437737 FAM167BQ9BTA0 163 aa13.2□□□□□ -0.3
LINC01088-201ENST00000437737 STMN4Q9H169 189 aaPredicted RBP13.2□□□□□ -0.3
LINC01088-201ENST00000437737 EPB41L4BQ9H329 900 aa13.2□□□□□ -0.3
LINC01088-201ENST00000437737 LIME1Q9H400 295 aa13.2□□□□□ -0.3
LINC01088-201ENST00000437737 DLL4Q9NR61 685 aa13.2□□□□□ -0.3
LINC01088-201ENST00000437737 TREX1Q9NSU2 369 aa13.2□□□□□ -0.3
LINC01088-201ENST00000437737 CATSPERZQ9NTU4 200 aa13.2□□□□□ -0.3
LINC01088-201ENST00000437737 C20orf96Q9NUD7 363 aaPredicted RBP13.2□□□□□ -0.3
LINC01088-201ENST00000437737 ZNF446Q9NWS9 450 aa13.2□□□□□ -0.3
LINC01088-201ENST00000437737 TXNDC16Q9P2K2 825 aa13.2□□□□□ -0.3
LINC01088-201ENST00000437737 RPH3AQ9Y2J0 694 aaPredicted RBP13.2□□□□□ -0.3
LINC01088-201ENST00000437737 MAP1AP78559 2803 aaPredicted RBP13.19□□□□□ -0.3
LINC01088-201ENST00000437737 CDK2AP1O14519 115 aa13.19□□□□□ -0.3
LINC01088-201ENST00000437737 HS6ST1O60243 411 aa13.19□□□□□ -0.3
LINC01088-201ENST00000437737 CDC123O75794 336 aaPredicted RBP13.19□□□□□ -0.3
LINC01088-201ENST00000437737 MYZAPP0CAP1 466 aa13.19□□□□□ -0.3
LINC01088-201ENST00000437737 IL1RNP18510 177 aa13.19□□□□□ -0.3
LINC01088-201ENST00000437737 TFEBP19484 476 aa13.19□□□□□ -0.3
LINC01088-201ENST00000437737 NMBRP28336 390 aa13.19□□□□□ -0.3
LINC01088-201ENST00000437737 ATP5DP30049 168 aa13.19□□□□□ -0.3
LINC01088-201ENST00000437737 MSH2P43246 934 aa13.19□□□□□ -0.3
LINC01088-201ENST00000437737 TTPAP49638 278 aa13.19□□□□□ -0.3
LINC01088-201ENST00000437737 NUP107P57740 925 aa13.19□□□□□ -0.3
LINC01088-201ENST00000437737 SLC26A5P58743 744 aa13.19□□□□□ -0.3
LINC01088-201ENST00000437737 SNRPNP63162 240 aaKnown RBP13.19□□□□□ -0.3
LINC01088-201ENST00000437737 PRDX1Q06830 199 aaKnown RBP13.19□□□□□ -0.3
LINC01088-201ENST00000437737 PMPCAQ10713 525 aa13.19□□□□□ -0.3
LINC01088-201ENST00000437737 USP10Q14694 798 aaKnown RBP13.19□□□□□ -0.3
LINC01088-201ENST00000437737 ABRAXAS2Q15018 415 aa13.19□□□□□ -0.3
LINC01088-201ENST00000437737 NSDHLQ15738 373 aa13.19□□□□□ -0.3
LINC01088-201ENST00000437737 HSP90B2PQ58FF3 399 aa13.19□□□□□ -0.3
LINC01088-201ENST00000437737 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.19□□□□□ -0.3
LINC01088-201ENST00000437737 Q71RC1 249 aaPredicted RBP13.19□□□□□ -0.3
LINC01088-201ENST00000437737 TDRPQ86YL5 185 aa13.19□□□□□ -0.3
LINC01088-201ENST00000437737 OR5M3Q8NGP4 307 aa13.19□□□□□ -0.3
LINC01088-201ENST00000437737 RMND5BQ96G75 393 aaPredicted RBP13.19□□□□□ -0.3
LINC01088-201ENST00000437737 ZNF778Q96MU6 729 aa13.19□□□□□ -0.3
LINC01088-201ENST00000437737 RBCK1Q9BYM8 510 aa13.19□□□□□ -0.3
LINC01088-201ENST00000437737 ZNF358Q9NW07 568 aa13.19□□□□□ -0.3
LINC01088-201ENST00000437737 ZFATQ9P243 1243 aa13.19□□□□□ -0.3
LINC01088-201ENST00000437737 EDARQ9UNE0 448 aa13.19□□□□□ -0.3
LINC01088-201ENST00000437737 PLEKHA6Q9Y2H5 1048 aa13.19□□□□□ -0.3
LINC01088-201ENST00000437737 KLF13Q9Y2Y9 288 aaPredicted RBP13.19□□□□□ -0.3
LINC01088-201ENST00000437737 FLNAP21333 2647 aaKnown RBP13.18□□□□□ -0.3
LINC01088-201ENST00000437737 FAM159BA6NKW6 160 aa13.18□□□□□ -0.3
LINC01088-201ENST00000437737 KLRC4-KLRK1H3BQV0 150 aa13.18□□□□□ -0.3
LINC01088-201ENST00000437737 SGK494L7N484 410 aa13.18□□□□□ -0.3
LINC01088-201ENST00000437737 CDH16O75309 829 aa13.18□□□□□ -0.3
LINC01088-201ENST00000437737 CTAG2O75638 210 aa13.18□□□□□ -0.3
LINC01088-201ENST00000437737 PDE9AO76083 593 aa13.18□□□□□ -0.3
LINC01088-201ENST00000437737 VAPBO95292 243 aa13.18□□□□□ -0.3
LINC01088-201ENST00000437737 INHBAP08476 426 aa13.18□□□□□ -0.3
LINC01088-201ENST00000437737 ERGP11308 486 aa13.18□□□□□ -0.3
LINC01088-201ENST00000437737 CNTFP26441 200 aa13.18□□□□□ -0.3
LINC01088-201ENST00000437737 BCL6P41182 706 aa13.18□□□□□ -0.3
LINC01088-201ENST00000437737 DGKQP52824 942 aa13.18□□□□□ -0.3
LINC01088-201ENST00000437737 PNLIPRP1P54315 467 aa13.18□□□□□ -0.3
LINC01088-201ENST00000437737 OR4D2P58180 307 aa13.18□□□□□ -0.3
LINC01088-201ENST00000437737 KBTBD12Q3ZCT8 623 aa13.18□□□□□ -0.3
LINC01088-201ENST00000437737 CEP85LQ5SZL2 805 aa13.18□□□□□ -0.3
LINC01088-201ENST00000437737 ARHGAP11AQ6P4F7 1023 aa13.18□□□□□ -0.3
LINC01088-201ENST00000437737 CES3Q6UWW8 571 aa13.18□□□□□ -0.3
LINC01088-201ENST00000437737 ACAD11Q709F0 780 aa13.18□□□□□ -0.3
LINC01088-201ENST00000437737 MTERF4Q7Z6M4 381 aaKnown RBP13.18□□□□□ -0.3
LINC01088-201ENST00000437737 SDCCAG8Q86SQ7 713 aaPredicted RBP13.18□□□□□ -0.3
LINC01088-201ENST00000437737 BIVMQ86UB2 503 aa13.18□□□□□ -0.3
LINC01088-201ENST00000437737 SLC26A11Q86WA9 606 aa13.18□□□□□ -0.3
LINC01088-201ENST00000437737 CTAGE3PQ8IX95 158 aa13.18□□□□□ -0.3
LINC01088-201ENST00000437737 ZZZ3Q8IYH5 903 aa13.18□□□□□ -0.3
LINC01088-201ENST00000437737 KIF2BQ8N4N8 673 aa13.18□□□□□ -0.3
LINC01088-201ENST00000437737 PPFIBP2Q8ND30 876 aa13.18□□□□□ -0.3
LINC01088-201ENST00000437737 OR10Q1Q8NGQ4 319 aa13.18□□□□□ -0.3
LINC01088-201ENST00000437737 UHMK1Q8TAS1 419 aaKnown RBP13.18□□□□□ -0.3
LINC01088-201ENST00000437737 ZCCHC10Q8TBK6 192 aa13.18□□□□□ -0.3
LINC01088-201ENST00000437737 ALPK1Q96QP1 1244 aa13.18□□□□□ -0.3
LINC01088-201ENST00000437737 GPATCH1Q9BRR8 931 aaKnown RBP13.18□□□□□ -0.3
LINC01088-201ENST00000437737 P2RY12Q9H244 342 aa13.18□□□□□ -0.3
LINC01088-201ENST00000437737 MARCH4Q9P2E8 410 aaPredicted RBP13.18□□□□□ -0.3
LINC01088-201ENST00000437737 ZNF180Q9UJW8 692 aa13.18□□□□□ -0.3
LINC01088-201ENST00000437737 ZNF839A8K0R7 811 aa13.17□□□□□ -0.3
LINC01088-201ENST00000437737 ARHGEF33A8MVX0 844 aa13.17□□□□□ -0.3
LINC01088-201ENST00000437737 POC1B-GALNT4F8VUJ3 575 aa13.17□□□□□ -0.3
LINC01088-201ENST00000437737 CD3EAPO15446 510 aaKnown RBP13.17□□□□□ -0.3
LINC01088-201ENST00000437737 RDH16O75452 317 aa13.17□□□□□ -0.3
LINC01088-201ENST00000437737 NDUFS3O75489 264 aa13.17□□□□□ -0.3
LINC01088-201ENST00000437737 MATN4O95460 622 aa13.17□□□□□ -0.3
LINC01088-201ENST00000437737 SHBGP04278 402 aa13.17□□□□□ -0.3
LINC01088-201ENST00000437737 SERPINB9P50453 376 aa13.17□□□□□ -0.3
LINC01088-201ENST00000437737 ADAM8P78325 824 aa13.17□□□□□ -0.3
LINC01088-201ENST00000437737 ABATP80404 500 aa13.17□□□□□ -0.3
LINC01088-201ENST00000437737 RELAQ04206 551 aa13.17□□□□□ -0.3
LINC01088-201ENST00000437737 ZNF844Q08AG5 666 aa13.17□□□□□ -0.3
LINC01088-201ENST00000437737 ARHGAP19Q14CB8 494 aa13.17□□□□□ -0.3
LINC01088-201ENST00000437737 KRT71Q3SY84 523 aa13.17□□□□□ -0.3
LINC01088-201ENST00000437737 CMPK2Q5EBM0 449 aa13.17□□□□□ -0.3
LINC01088-201ENST00000437737 THEMIS2Q5TEJ8 643 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms