RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 ARHGEF39Q8N4T4 335 aa21.86■■□□□ 1.09
CPSF4-204ENST00000436336 ACOT4Q8N9L9 421 aa21.86■■□□□ 1.09
CPSF4-204ENST00000436336 RCBTB1Q8NDN9 531 aa21.86■■□□□ 1.09
CPSF4-204ENST00000436336 OR8K5Q8NH50 307 aa21.86■■□□□ 1.09
CPSF4-204ENST00000436336 PUM2Q8TB72 1066 aaKnown RBP eCLIP21.86■■□□□ 1.09
CPSF4-204ENST00000436336 SLC45A3Q96JT2 553 aa21.86■■□□□ 1.09
CPSF4-204ENST00000436336 FANCEQ9HB96 536 aa21.86■■□□□ 1.09
CPSF4-204ENST00000436336 IRAK4Q9NWZ3 460 aa21.86■■□□□ 1.09
CPSF4-204ENST00000436336 LOC100653049A0A140TA62 436 aa21.85■■□□□ 1.09
CPSF4-204ENST00000436336 FITM1A5D6W6 292 aa21.85■■□□□ 1.09
CPSF4-204ENST00000436336 TMEM150CB9EJG8 249 aa21.85■■□□□ 1.09
CPSF4-204ENST00000436336 KRT34O76011 436 aa21.85■■□□□ 1.09
CPSF4-204ENST00000436336 SNRPB2P08579 225 aaKnown RBP21.85■■□□□ 1.09
CPSF4-204ENST00000436336 T-ENOLP0DO92 83 aa21.85■■□□□ 1.09
CPSF4-204ENST00000436336 ESRRAP11474 423 aaPredicted RBP21.85■■□□□ 1.09
CPSF4-204ENST00000436336 IL12AP29459 219 aa21.85■■□□□ 1.09
CPSF4-204ENST00000436336 ZFP36L2P47974 494 aaKnown RBP21.85■■□□□ 1.09
CPSF4-204ENST00000436336 LIMK1P53667 647 aa21.85■■□□□ 1.09
CPSF4-204ENST00000436336 EMP3P54852 163 aa21.85■■□□□ 1.09
CPSF4-204ENST00000436336 MTTPP55157 894 aa21.85■■□□□ 1.09
CPSF4-204ENST00000436336 C21orf58P58505 322 aa21.85■■□□□ 1.09
CPSF4-204ENST00000436336 BTN3A2P78410 334 aa21.85■■□□□ 1.09
CPSF4-204ENST00000436336 ACY1Q03154 408 aa21.85■■□□□ 1.09
CPSF4-204ENST00000436336 ZFP36L1Q07352 338 aaKnown RBP21.85■■□□□ 1.09
CPSF4-204ENST00000436336 RCAN2Q14206 197 aa21.85■■□□□ 1.09
CPSF4-204ENST00000436336 NDUFA9Q16795 377 aa21.85■■□□□ 1.09
CPSF4-204ENST00000436336 PHF19Q5T6S3 580 aa21.85■■□□□ 1.09
CPSF4-204ENST00000436336 GARNL3Q5VVW2 1013 aa21.85■■□□□ 1.09
CPSF4-204ENST00000436336 IKBIPQ70UQ0 350 aa21.85■■□□□ 1.09
CPSF4-204ENST00000436336 ZNF771Q7L3S4 317 aaPredicted RBP21.85■■□□□ 1.09
CPSF4-204ENST00000436336 SNX32Q86XE0 403 aa21.85■■□□□ 1.09
CPSF4-204ENST00000436336 RIMKLAQ8IXN7 391 aa21.85■■□□□ 1.09
CPSF4-204ENST00000436336 TMEM132CQ8N3T6 1108 aa21.85■■□□□ 1.09
CPSF4-204ENST00000436336 POU5F2Q8N7G0 328 aa21.85■■□□□ 1.09
CPSF4-204ENST00000436336 AMER3Q8N944 861 aa21.85■■□□□ 1.09
CPSF4-204ENST00000436336 CDC26Q8NHZ8 85 aa21.85■■□□□ 1.09
CPSF4-204ENST00000436336 TSPEARQ8WU66 669 aa21.85■■□□□ 1.09
CPSF4-204ENST00000436336 STARD8Q92502 1023 aa21.85■■□□□ 1.09
CPSF4-204ENST00000436336 SLC25A23Q9BV35 468 aa21.85■■□□□ 1.09
CPSF4-204ENST00000436336 CLMPQ9H6B4 373 aa21.85■■□□□ 1.09
CPSF4-204ENST00000436336 PCDHGA1Q9Y5H4 931 aa21.85■■□□□ 1.09
CPSF4-204ENST00000436336 SPTBP11277 2137 aa21.85■■□□□ 1.09
CPSF4-204ENST00000436336 H3BMH7 237 aa21.84■■□□□ 1.09
CPSF4-204ENST00000436336 TMPRSS11DO60235 418 aa21.84■■□□□ 1.09
CPSF4-204ENST00000436336 ATP5HO75947 161 aa21.84■■□□□ 1.09
CPSF4-204ENST00000436336 KIAA0754O94854 1291 aa21.84■■□□□ 1.09
CPSF4-204ENST00000436336 KCNK10P57789 538 aa21.84■■□□□ 1.09
CPSF4-204ENST00000436336 TAS2R50P59544 299 aa21.84■■□□□ 1.09
CPSF4-204ENST00000436336 GRM7Q14831 915 aa21.84■■□□□ 1.09
CPSF4-204ENST00000436336 SLC9A5Q14940 896 aa21.84■■□□□ 1.09
CPSF4-204ENST00000436336 ASCL5Q7RTU5 278 aa21.84■■□□□ 1.09
CPSF4-204ENST00000436336 KRTCAP2Q8N6L1 136 aa21.84■■□□□ 1.09
CPSF4-204ENST00000436336 TTC29Q8NA56 475 aaPredicted RBP21.84■■□□□ 1.09
CPSF4-204ENST00000436336 ZNF501Q96CX3 271 aaPredicted RBP21.84■■□□□ 1.09
CPSF4-204ENST00000436336 SERINC2Q96SA4 455 aa21.84■■□□□ 1.09
CPSF4-204ENST00000436336 PHOX2BQ99453 314 aa21.84■■□□□ 1.09
CPSF4-204ENST00000436336 FGF21Q9NSA1 209 aa21.84■■□□□ 1.09
CPSF4-204ENST00000436336 TXLNGQ9NUQ3 528 aa21.84■■□□□ 1.09
CPSF4-204ENST00000436336 MRPS2Q9Y399 296 aaKnown RBP21.84■■□□□ 1.09
CPSF4-204ENST00000436336 CROCCQ5TZA2 2017 aa21.84■■□□□ 1.09
CPSF4-204ENST00000436336 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.83■■□□□ 1.09
CPSF4-204ENST00000436336 DYTNA2CJ06 578 aa21.83■■□□□ 1.09
CPSF4-204ENST00000436336 NR5A2O00482 541 aa21.83■■□□□ 1.09
CPSF4-204ENST00000436336 OR2B3O76000 313 aa21.83■■□□□ 1.09
CPSF4-204ENST00000436336 LRATO95237 230 aa21.83■■□□□ 1.09
CPSF4-204ENST00000436336 CERS1P27544 350 aa21.83■■□□□ 1.09
CPSF4-204ENST00000436336 SLAMF1Q13291 335 aa21.83■■□□□ 1.09
CPSF4-204ENST00000436336 DEFB134Q4QY38 66 aa21.83■■□□□ 1.09
CPSF4-204ENST00000436336 MRM1Q6IN84 353 aaKnown RBP21.83■■□□□ 1.09
CPSF4-204ENST00000436336 RBM44Q6ZP01 1051 aaKnown RBP21.83■■□□□ 1.09
CPSF4-204ENST00000436336 RIPOR1Q6ZS17 1223 aa21.83■■□□□ 1.09
CPSF4-204ENST00000436336 GLRX5Q86SX6 157 aa21.83■■□□□ 1.09
CPSF4-204ENST00000436336 TESCQ96BS2 214 aa21.83■■□□□ 1.09
CPSF4-204ENST00000436336 TM4SF18Q96CE8 201 aa21.83■■□□□ 1.09
CPSF4-204ENST00000436336 SPRTNQ9H040 489 aaPredicted RBP21.83■■□□□ 1.09
CPSF4-204ENST00000436336 SERTAD3Q9UJW9 196 aa21.83■■□□□ 1.09
CPSF4-204ENST00000436336 HYKKA2RU49 373 aa21.83■■□□□ 1.08
CPSF4-204ENST00000436336 C9JVG2 144 aa21.83■■□□□ 1.08
CPSF4-204ENST00000436336 UNC5CO95185 931 aa21.83■■□□□ 1.08
CPSF4-204ENST00000436336 B3GALT4O96024 378 aa21.83■■□□□ 1.08
CPSF4-204ENST00000436336 FAM58BPP0C7Q3 252 aa21.83■■□□□ 1.08
CPSF4-204ENST00000436336 ITGA1P56199 1179 aa21.83■■□□□ 1.08
CPSF4-204ENST00000436336 SNRPNP63162 240 aaKnown RBP21.83■■□□□ 1.08
CPSF4-204ENST00000436336 STX5Q13190 355 aa21.83■■□□□ 1.08
CPSF4-204ENST00000436336 DPY19L1Q2PZI1 675 aa21.83■■□□□ 1.08
CPSF4-204ENST00000436336 LACTB2Q53H82 288 aaPredicted RBP21.83■■□□□ 1.08
CPSF4-204ENST00000436336 FAM71E1Q6IPT2 247 aa21.83■■□□□ 1.08
CPSF4-204ENST00000436336 NIPAL1Q6NVV3 410 aa21.83■■□□□ 1.08
CPSF4-204ENST00000436336 GPR135Q8IZ08 494 aa21.83■■□□□ 1.08
CPSF4-204ENST00000436336 OR1L3Q8NH93 324 aa21.83■■□□□ 1.08
CPSF4-204ENST00000436336 GFM2Q969S9 779 aaKnown RBP21.83■■□□□ 1.08
CPSF4-204ENST00000436336 SPDL1Q96EA4 605 aa21.83■■□□□ 1.08
CPSF4-204ENST00000436336 ANKHQ9HCJ1 492 aa21.83■■□□□ 1.08
CPSF4-204ENST00000436336 LYARQ9NX58 379 aaKnown RBP21.83■■□□□ 1.08
CPSF4-204ENST00000436336 PCNX2A6NKB5 2137 aa21.82■■□□□ 1.08
CPSF4-204ENST00000436336 AKAP10O43572 662 aa21.82■■□□□ 1.08
CPSF4-204ENST00000436336 GALR3O60755 368 aaPredicted RBP21.82■■□□□ 1.08
CPSF4-204ENST00000436336 HNRNPCL1O60812 293 aaKnown RBP21.82■■□□□ 1.08
CPSF4-204ENST00000436336 GUCY1B2O75343 617 aa21.82■■□□□ 1.08
CPSF4-204ENST00000436336 IL3P08700 152 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms