RNA–Protein interactions for RNA: ENST00000435525.1

CTDSPL-204, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 371 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-204ENST00000435525 PHF11Q9UIL8 331 aa15.68■□□□□ 0.1
CTDSPL-204ENST00000435525 MRPS33Q9Y291 106 aaKnown RBP15.68■□□□□ 0.1
CTDSPL-204ENST00000435525 MAU2Q9Y6X3 613 aa15.68■□□□□ 0.1
CTDSPL-204ENST00000435525 TMEM8BA6NDV4 472 aa15.67■□□□□ 0.1
CTDSPL-204ENST00000435525 TMEM233B4DJY2 109 aa15.67■□□□□ 0.1
CTDSPL-204ENST00000435525 TCP11X1B4DZS4 312 aa15.67■□□□□ 0.1
CTDSPL-204ENST00000435525 SGK494L7N484 410 aa15.67■□□□□ 0.1
CTDSPL-204ENST00000435525 PIP5K1BO14986 540 aa15.67■□□□□ 0.1
CTDSPL-204ENST00000435525 RRP8O43159 456 aaKnown RBP15.67■□□□□ 0.1
CTDSPL-204ENST00000435525 FOXS1O43638 330 aa15.67■□□□□ 0.1
CTDSPL-204ENST00000435525 SEC22BO75396 215 aa15.67■□□□□ 0.1
CTDSPL-204ENST00000435525 ONECUT2O95948 504 aa15.67■□□□□ 0.1
CTDSPL-204ENST00000435525 VIMP08670 466 aaKnown RBP15.67■□□□□ 0.1
CTDSPL-204ENST00000435525 RAB40ALP0C0E4 278 aa15.67■□□□□ 0.1
CTDSPL-204ENST00000435525 ATXN8OSP0DMR3 200 aa15.67■□□□□ 0.1
CTDSPL-204ENST00000435525 SMIM10L1P0DMW3 83 aa15.67■□□□□ 0.1
CTDSPL-204ENST00000435525 KITP10721 976 aa15.67■□□□□ 0.1
CTDSPL-204ENST00000435525 TCN2P20062 427 aa15.67■□□□□ 0.1
CTDSPL-204ENST00000435525 HIST1H1TP22492 207 aaPredicted RBP15.67■□□□□ 0.1
CTDSPL-204ENST00000435525 JAK1P23458 1154 aa15.67■□□□□ 0.1
CTDSPL-204ENST00000435525 ATP5A1P25705 553 aaKnown RBP15.67■□□□□ 0.1
CTDSPL-204ENST00000435525 TLX1P31314 330 aaPredicted RBP15.67■□□□□ 0.1
CTDSPL-204ENST00000435525 ARRB2P32121 409 aa15.67■□□□□ 0.1
CTDSPL-204ENST00000435525 OR1D4P47884 311 aa15.67■□□□□ 0.1
CTDSPL-204ENST00000435525 HMGCS1Q01581 520 aa15.67■□□□□ 0.1
CTDSPL-204ENST00000435525 GUCY1A3Q02108 690 aa15.67■□□□□ 0.1
CTDSPL-204ENST00000435525 MAD2L1Q13257 205 aaPredicted RBP15.67■□□□□ 0.1
CTDSPL-204ENST00000435525 PDCD2Q16342 344 aaPredicted RBP15.67■□□□□ 0.1
CTDSPL-204ENST00000435525 ATP6AP1LQ52LC2 224 aa15.67■□□□□ 0.1
CTDSPL-204ENST00000435525 CCNYL2Q5T2Q4 361 aa15.67■□□□□ 0.1
CTDSPL-204ENST00000435525 CES4AQ5XG92 561 aa15.67■□□□□ 0.1
CTDSPL-204ENST00000435525 OVCH1Q7RTY7 1134 aa15.67■□□□□ 0.1
CTDSPL-204ENST00000435525 PARP9Q8IXQ6 854 aa15.67■□□□□ 0.1
CTDSPL-204ENST00000435525 METTL4Q8N3J2 472 aa15.67■□□□□ 0.1
CTDSPL-204ENST00000435525 RNF175Q8N4F7 328 aa15.67■□□□□ 0.1
CTDSPL-204ENST00000435525 ACOT4Q8N9L9 421 aa15.67■□□□□ 0.1
CTDSPL-204ENST00000435525 SLC38A9Q8NBW4 561 aa15.67■□□□□ 0.1
CTDSPL-204ENST00000435525 SNIP1Q8TAD8 396 aaKnown RBP15.67■□□□□ 0.1
CTDSPL-204ENST00000435525 KCNE4Q8WWG9 221 aa15.67■□□□□ 0.1
CTDSPL-204ENST00000435525 SMIM10Q96HG1 83 aa15.67■□□□□ 0.1
CTDSPL-204ENST00000435525 MRPL1Q9BYD6 325 aaKnown RBP15.67■□□□□ 0.1
CTDSPL-204ENST00000435525 DPH1Q9BZG8 443 aa15.67■□□□□ 0.1
CTDSPL-204ENST00000435525 C20orf27Q9GZN8 174 aa15.67■□□□□ 0.1
CTDSPL-204ENST00000435525 CHST8Q9H2A9 424 aa15.67■□□□□ 0.1
CTDSPL-204ENST00000435525 ZNF395Q9H8N7 513 aaPredicted RBP15.67■□□□□ 0.1
CTDSPL-204ENST00000435525 WDR41Q9HAD4 459 aa15.67■□□□□ 0.1
CTDSPL-204ENST00000435525 LRTM1Q9HBL6 345 aa15.67■□□□□ 0.1
CTDSPL-204ENST00000435525 LYRM4Q9HD34 91 aa15.67■□□□□ 0.1
CTDSPL-204ENST00000435525 TNFRSF12AQ9NP84 129 aa15.67■□□□□ 0.1
CTDSPL-204ENST00000435525 PNPOQ9NVS9 261 aa15.67■□□□□ 0.1
CTDSPL-204ENST00000435525 C1orf109Q9NX04 203 aa15.67■□□□□ 0.1
CTDSPL-204ENST00000435525 MRPS2Q9Y399 296 aaKnown RBP15.67■□□□□ 0.1
CTDSPL-204ENST00000435525 TMED5Q9Y3A6 229 aa15.67■□□□□ 0.1
CTDSPL-204ENST00000435525 SPTBN4Q9H254 2564 aa15.66■□□□□ 0.1
CTDSPL-204ENST00000435525 A0A0G2JN53 185 aa15.66■□□□□ 0.1
CTDSPL-204ENST00000435525 BLACEA4D250 179 aa15.66■□□□□ 0.1
CTDSPL-204ENST00000435525 PLPP1O14494 284 aa15.66■□□□□ 0.1
CTDSPL-204ENST00000435525 RDH16O75452 317 aa15.66■□□□□ 0.1
CTDSPL-204ENST00000435525 SCELO95171 688 aa15.66■□□□□ 0.1
CTDSPL-204ENST00000435525 STAT5AP42229 794 aa15.66■□□□□ 0.1
CTDSPL-204ENST00000435525 GSTM5P46439 218 aa15.66■□□□□ 0.1
CTDSPL-204ENST00000435525 BTKQ06187 659 aa15.66■□□□□ 0.1
CTDSPL-204ENST00000435525 UGT3A2Q3SY77 523 aa15.66■□□□□ 0.1
CTDSPL-204ENST00000435525 FAM47EQ6ZV65 393 aa15.66■□□□□ 0.1
CTDSPL-204ENST00000435525 TIPARPQ7Z3E1 657 aaKnown RBP15.66■□□□□ 0.1
CTDSPL-204ENST00000435525 ZCCHC7Q8N3Z6 543 aaKnown RBP15.66■□□□□ 0.1
CTDSPL-204ENST00000435525 C1orf52Q8N6N3 182 aaKnown RBP15.66■□□□□ 0.1
CTDSPL-204ENST00000435525 C7orf57Q8NEG2 295 aa15.66■□□□□ 0.1
CTDSPL-204ENST00000435525 GATA6Q92908 595 aa15.66■□□□□ 0.1
CTDSPL-204ENST00000435525 NKD1Q969G9 470 aa15.66■□□□□ 0.1
CTDSPL-204ENST00000435525 MIEF2Q96C03 454 aa15.66■□□□□ 0.1
CTDSPL-204ENST00000435525 TUBGCP3Q96CW5 907 aa15.66■□□□□ 0.1
CTDSPL-204ENST00000435525 RNF31Q96EP0 1072 aa15.66■□□□□ 0.1
CTDSPL-204ENST00000435525 VPS50Q96JG6 964 aa15.66■□□□□ 0.1
CTDSPL-204ENST00000435525 OR1F2PQ96R84 312 aa15.66■□□□□ 0.1
CTDSPL-204ENST00000435525 CCDC134Q9H6E4 229 aa15.66■□□□□ 0.1
CTDSPL-204ENST00000435525 DDX31Q9H8H2 851 aaKnown RBP15.66■□□□□ 0.1
CTDSPL-204ENST00000435525 WDR54Q9H977 334 aa15.66■□□□□ 0.1
CTDSPL-204ENST00000435525 GPN2Q9H9Y4 310 aaPredicted RBP15.66■□□□□ 0.1
CTDSPL-204ENST00000435525 PRDM7Q9NQW5 492 aa15.66■□□□□ 0.1
CTDSPL-204ENST00000435525 HCN3Q9P1Z3 774 aa15.66■□□□□ 0.1
CTDSPL-204ENST00000435525 MARCOQ9UEW3 520 aaPredicted RBP15.66■□□□□ 0.1
CTDSPL-204ENST00000435525 DNAH14Q0VDD8 3507 aa15.65■□□□□ 0.1
CTDSPL-204ENST00000435525 GNG14A0A1W2PPG7 69 aa15.65■□□□□ 0.1
CTDSPL-204ENST00000435525 ZNF860A6NHJ4 632 aa15.65■□□□□ 0.1
CTDSPL-204ENST00000435525 RTCAO00442 366 aaKnown RBP15.65■□□□□ 0.1
CTDSPL-204ENST00000435525 CLDN4O14493 209 aa15.65■□□□□ 0.1
CTDSPL-204ENST00000435525 CHST10O43529 356 aa15.65■□□□□ 0.1
CTDSPL-204ENST00000435525 TGDSO95455 350 aa15.65■□□□□ 0.1
CTDSPL-204ENST00000435525 ETHE1O95571 254 aa15.65■□□□□ 0.1
CTDSPL-204ENST00000435525 TBX6O95947 436 aaPredicted RBP15.65■□□□□ 0.1
CTDSPL-204ENST00000435525 KLK1P06870 262 aa15.65■□□□□ 0.1
CTDSPL-204ENST00000435525 TROVE2P10155 538 aaKnown RBP eCLIP15.65■□□□□ 0.1
CTDSPL-204ENST00000435525 PCSK2P16519 638 aa15.65■□□□□ 0.1
CTDSPL-204ENST00000435525 PRPH2P23942 346 aa15.65■□□□□ 0.1
CTDSPL-204ENST00000435525 CERS1P27544 350 aa15.65■□□□□ 0.1
CTDSPL-204ENST00000435525 DLSTP36957 453 aa15.65■□□□□ 0.1
CTDSPL-204ENST00000435525 BUD31P41223 144 aaPredicted RBP15.65■□□□□ 0.1
CTDSPL-204ENST00000435525 MAPK12P53778 367 aa15.65■□□□□ 0.1
CTDSPL-204ENST00000435525 TRA2BP62995 288 aaKnown RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms