RNA–Protein interactions for RNA: ENST00000435022.5

HMG20B-205, Transcript of high mobility group 20B, humanhuman

TSL 5

Gene HMG20B, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-205ENST00000435022 RUNX2Q13950 521 aa20.87■□□□□ 0.93
HMG20B-205ENST00000435022 RBBP5Q15291 538 aaKnown RBP20.87■□□□□ 0.93
HMG20B-205ENST00000435022 ZNF630Q2M218 657 aaPredicted RBP20.87■□□□□ 0.93
HMG20B-205ENST00000435022 ADNP2Q6IQ32 1131 aa20.87■□□□□ 0.93
HMG20B-205ENST00000435022 VN1R5Q7Z5H4 357 aa20.87■□□□□ 0.93
HMG20B-205ENST00000435022 NKAPQ8N5F7 415 aaKnown RBP20.87■□□□□ 0.93
HMG20B-205ENST00000435022 TBC1D19Q8N5T2 526 aa20.87■□□□□ 0.93
HMG20B-205ENST00000435022 CPSF7Q8N684 471 aaKnown RBP20.87■□□□□ 0.93
HMG20B-205ENST00000435022 TMEM178AQ8NBL3 297 aa20.87■□□□□ 0.93
HMG20B-205ENST00000435022 APCDD1LQ8NCL9 501 aa20.87■□□□□ 0.93
HMG20B-205ENST00000435022 TMEM79Q9BSE2 394 aa20.87■□□□□ 0.93
HMG20B-205ENST00000435022 PRDM9Q9NQV7 894 aa20.87■□□□□ 0.93
HMG20B-205ENST00000435022 SLC25A12O75746 678 aa20.86■□□□□ 0.93
HMG20B-205ENST00000435022 HTR1EP28566 365 aa20.86■□□□□ 0.93
HMG20B-205ENST00000435022 PPP2R1BP30154 601 aa20.86■□□□□ 0.93
HMG20B-205ENST00000435022 RPL21P46778 160 aaKnown RBP20.86■□□□□ 0.93
HMG20B-205ENST00000435022 MRPS25P82663 173 aaKnown RBP20.86■□□□□ 0.93
HMG20B-205ENST00000435022 RBPJQ06330 500 aa20.86■□□□□ 0.93
HMG20B-205ENST00000435022 CBLBQ13191 982 aa20.86■□□□□ 0.93
HMG20B-205ENST00000435022 NIPAL1Q6NVV3 410 aa20.86■□□□□ 0.93
HMG20B-205ENST00000435022 RPTNQ6XPR3 784 aa20.86■□□□□ 0.93
HMG20B-205ENST00000435022 SPPL2CQ8IUH8 684 aa20.86■□□□□ 0.93
HMG20B-205ENST00000435022 SCUBE1Q8IWY4 988 aa20.86■□□□□ 0.93
HMG20B-205ENST00000435022 KRT12Q99456 494 aa20.86■□□□□ 0.93
HMG20B-205ENST00000435022 EGFL8Q99944 293 aa20.86■□□□□ 0.93
HMG20B-205ENST00000435022 CLK4Q9HAZ1 481 aaKnown RBP20.86■□□□□ 0.93
HMG20B-205ENST00000435022 KCNE2Q9Y6J6 123 aa20.86■□□□□ 0.93
HMG20B-205ENST00000435022 CXorf49A8MYA2 514 aaPredicted RBP20.85■□□□□ 0.93
HMG20B-205ENST00000435022 C19orf84I3L1E1 186 aa20.85■□□□□ 0.93
HMG20B-205ENST00000435022 TAPBPO15533 448 aa20.85■□□□□ 0.93
HMG20B-205ENST00000435022 ASNA1O43681 348 aa20.85■□□□□ 0.93
HMG20B-205ENST00000435022 WDR47O94967 919 aa20.85■□□□□ 0.93
HMG20B-205ENST00000435022 TRHRP34981 398 aaPredicted RBP20.85■□□□□ 0.93
HMG20B-205ENST00000435022 SKP1P63208 163 aa20.85■□□□□ 0.93
HMG20B-205ENST00000435022 SLBPQ14493 270 aaKnown RBP eCLIP20.85■□□□□ 0.93
HMG20B-205ENST00000435022 MAPKAPK3Q16644 382 aa20.85■□□□□ 0.93
HMG20B-205ENST00000435022 FBXO48Q5FWF7 155 aa20.85■□□□□ 0.93
HMG20B-205ENST00000435022 SPATA6LQ8N4H0 392 aa20.85■□□□□ 0.93
HMG20B-205ENST00000435022 MS4A6EQ96DS6 147 aa20.85■□□□□ 0.93
HMG20B-205ENST00000435022 VPS39Q96JC1 886 aa20.85■□□□□ 0.93
HMG20B-205ENST00000435022 MAGED4Q96JG8 741 aa20.85■□□□□ 0.93
HMG20B-205ENST00000435022 QRFPRQ96P65 431 aa20.85■□□□□ 0.93
HMG20B-205ENST00000435022 RHOJQ9H4E5 214 aa20.85■□□□□ 0.93
HMG20B-205ENST00000435022 CAB39LQ9H9S4 337 aa20.85■□□□□ 0.93
HMG20B-205ENST00000435022 CTNNAL1Q9UBT7 734 aa20.85■□□□□ 0.93
HMG20B-205ENST00000435022 ASB1Q9Y576 335 aa20.85■□□□□ 0.93
HMG20B-205ENST00000435022 CSMD2Q7Z408 3487 aa20.85■□□□□ 0.93
HMG20B-205ENST00000435022 DCHS2Q6V1P9 2916 aa20.84■□□□□ 0.93
HMG20B-205ENST00000435022 ADAM10O14672 748 aa20.84■□□□□ 0.93
HMG20B-205ENST00000435022 C1GALT1C1LP0DN25 315 aa20.84■□□□□ 0.93
HMG20B-205ENST00000435022 BTN3A2P78410 334 aa20.84■□□□□ 0.93
HMG20B-205ENST00000435022 C2orf54Q08AI8 447 aa20.84■□□□□ 0.93
HMG20B-205ENST00000435022 KRTCAP3Q53RY4 240 aa20.84■□□□□ 0.93
HMG20B-205ENST00000435022 CAPN12Q6ZSI9 719 aa20.84■□□□□ 0.93
HMG20B-205ENST00000435022 GAL3ST3Q96A11 431 aa20.84■□□□□ 0.93
HMG20B-205ENST00000435022 PHF12Q96QT6 1004 aa20.84■□□□□ 0.93
HMG20B-205ENST00000435022 MTO1Q9Y2Z2 717 aaKnown RBP20.84■□□□□ 0.93
HMG20B-205ENST00000435022 MEMO1Q9Y316 297 aa20.84■□□□□ 0.93
HMG20B-205ENST00000435022 SNX24Q9Y343 169 aa20.84■□□□□ 0.93
HMG20B-205ENST00000435022 NCF1BA6NI72 391 aaPredicted RBP20.83■□□□□ 0.93
HMG20B-205ENST00000435022 NCF1CA8MVU1 366 aaPredicted RBP20.83■□□□□ 0.93
HMG20B-205ENST00000435022 PRKNO60260 465 aaPredicted RBP20.83■□□□□ 0.93
HMG20B-205ENST00000435022 C1QAP02745 245 aa20.83■□□□□ 0.93
HMG20B-205ENST00000435022 SNRPB2P08579 225 aaKnown RBP20.83■□□□□ 0.93
HMG20B-205ENST00000435022 NCF1P14598 390 aaPredicted RBP20.83■□□□□ 0.93
HMG20B-205ENST00000435022 CD22P20273 847 aa20.83■□□□□ 0.93
HMG20B-205ENST00000435022 GMPRP36959 345 aa20.83■□□□□ 0.93
HMG20B-205ENST00000435022 HLCSP50747 726 aa20.83■□□□□ 0.93
HMG20B-205ENST00000435022 GPR143P51810 404 aa20.83■□□□□ 0.93
HMG20B-205ENST00000435022 TGFBIQ15582 683 aa20.83■□□□□ 0.93
HMG20B-205ENST00000435022 MTFR2Q6P444 385 aa20.83■□□□□ 0.93
HMG20B-205ENST00000435022 ADAMTSL2Q86TH1 951 aa20.83■□□□□ 0.93
HMG20B-205ENST00000435022 SPATA4Q8NEY3 305 aa20.83■□□□□ 0.93
HMG20B-205ENST00000435022 ESAMQ96AP7 390 aa20.83■□□□□ 0.93
HMG20B-205ENST00000435022 TRIM8Q9BZR9 551 aa20.83■□□□□ 0.93
HMG20B-205ENST00000435022 POPDC3Q9HBV1 291 aa20.83■□□□□ 0.93
HMG20B-205ENST00000435022 GPAMQ9HCL2 828 aa20.83■□□□□ 0.93
HMG20B-205ENST00000435022 PPIEQ9UNP9 301 aaKnown RBP20.83■□□□□ 0.93
HMG20B-205ENST00000435022 CACNA1CQ13936 2221 aa20.83■□□□□ 0.93
HMG20B-205ENST00000435022 GTF3C1Q12789 2109 aa20.83■□□□□ 0.92
HMG20B-205ENST00000435022 PKDREJQ9NTG1 2253 aa20.83■□□□□ 0.92
HMG20B-205ENST00000435022 LRIT2A6NDA9 550 aa20.82■□□□□ 0.92
HMG20B-205ENST00000435022 URADA6NGE7 173 aa20.82■□□□□ 0.92
HMG20B-205ENST00000435022 EFCAB8A8MWE9 144 aa20.82■□□□□ 0.92
HMG20B-205ENST00000435022 PSMD12O00232 456 aaPredicted RBP20.82■□□□□ 0.92
HMG20B-205ENST00000435022 ERI3O43414 337 aaKnown RBP20.82■□□□□ 0.92
HMG20B-205ENST00000435022 MYO1DO94832 1006 aa20.82■□□□□ 0.92
HMG20B-205ENST00000435022 ZNF24P17028 368 aa20.82■□□□□ 0.92
HMG20B-205ENST00000435022 GNAZP19086 355 aa20.82■□□□□ 0.92
HMG20B-205ENST00000435022 EPORP19235 508 aa20.82■□□□□ 0.92
HMG20B-205ENST00000435022 PTGER1P34995 402 aa20.82■□□□□ 0.92
HMG20B-205ENST00000435022 CYB561P49447 251 aa20.82■□□□□ 0.92
HMG20B-205ENST00000435022 HNMTP50135 292 aa20.82■□□□□ 0.92
HMG20B-205ENST00000435022 NR0B1P51843 470 aaKnown RBP20.82■□□□□ 0.92
HMG20B-205ENST00000435022 ADPRMQ3LIE5 342 aa20.82■□□□□ 0.92
HMG20B-205ENST00000435022 TMIGD1Q6UXZ0 262 aa20.82■□□□□ 0.92
HMG20B-205ENST00000435022 C16orf47Q6ZP98 133 aaPredicted RBP20.82■□□□□ 0.92
HMG20B-205ENST00000435022 ZBED8Q8IZ13 594 aa20.82■□□□□ 0.92
HMG20B-205ENST00000435022 HORMAD2Q8N7B1 307 aa20.82■□□□□ 0.92
HMG20B-205ENST00000435022 B3GNT7Q8NFL0 401 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms