RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 PCNAP12004 261 aa17.33■□□□□ 0.36
HLA-F-220ENST00000434407 CDH13P55290 713 aa17.33■□□□□ 0.36
HLA-F-220ENST00000434407 BTN3A2P78410 334 aa17.33■□□□□ 0.36
HLA-F-220ENST00000434407 CLCQ05315 142 aa17.33■□□□□ 0.36
HLA-F-220ENST00000434407 ZNF844Q08AG5 666 aa17.33■□□□□ 0.36
HLA-F-220ENST00000434407 CHAF1BQ13112 559 aa17.33■□□□□ 0.36
HLA-F-220ENST00000434407 CPSF6Q16630 551 aaKnown RBP eCLIP17.33■□□□□ 0.36
HLA-F-220ENST00000434407 DEPDC1Q5TB30 811 aa17.33■□□□□ 0.36
HLA-F-220ENST00000434407 TRIM40Q6P9F5 258 aa17.33■□□□□ 0.36
HLA-F-220ENST00000434407 PLPP5Q8NEB5 264 aa17.33■□□□□ 0.36
HLA-F-220ENST00000434407 SRFBP1Q8NEF9 429 aaKnown RBP17.33■□□□□ 0.36
HLA-F-220ENST00000434407 MYRIPQ8NFW9 859 aa17.33■□□□□ 0.36
HLA-F-220ENST00000434407 RDH11Q8TC12 318 aa17.33■□□□□ 0.36
HLA-F-220ENST00000434407 ATP6V1E2Q96A05 226 aa17.33■□□□□ 0.36
HLA-F-220ENST00000434407 TBC1D20Q96BZ9 403 aa17.33■□□□□ 0.36
HLA-F-220ENST00000434407 CCDC126Q96EE4 140 aa17.33■□□□□ 0.36
HLA-F-220ENST00000434407 CMTM7Q96FZ5 175 aa17.33■□□□□ 0.36
HLA-F-220ENST00000434407 ABHD17AQ96GS6 310 aa17.33■□□□□ 0.36
HLA-F-220ENST00000434407 PEX11GQ96HA9 241 aa17.33■□□□□ 0.36
HLA-F-220ENST00000434407 VPS50Q96JG6 964 aa17.33■□□□□ 0.36
HLA-F-220ENST00000434407 CDK15Q96Q40 435 aa17.33■□□□□ 0.36
HLA-F-220ENST00000434407 SEMA4BQ9NPR2 832 aaPredicted RBP17.33■□□□□ 0.36
HLA-F-220ENST00000434407 ACSS2Q9NR19 701 aa17.33■□□□□ 0.36
HLA-F-220ENST00000434407 FBXL4Q9UKA2 621 aa17.33■□□□□ 0.36
HLA-F-220ENST00000434407 PLLPQ9Y342 182 aa17.33■□□□□ 0.36
HLA-F-220ENST00000434407 PCDHGA9Q9Y5G4 932 aaKnown RBP17.33■□□□□ 0.36
HLA-F-220ENST00000434407 A0A088AWK7 358 aa17.32■□□□□ 0.36
HLA-F-220ENST00000434407 CCDC151A5D8V7 595 aa17.32■□□□□ 0.36
HLA-F-220ENST00000434407 MKRN2OSH3BPM6 223 aa17.32■□□□□ 0.36
HLA-F-220ENST00000434407 ALOX12BO75342 701 aa17.32■□□□□ 0.36
HLA-F-220ENST00000434407 SCELO95171 688 aa17.32■□□□□ 0.36
HLA-F-220ENST00000434407 TGFB1P01137 390 aa17.32■□□□□ 0.36
HLA-F-220ENST00000434407 FHP07954 510 aa17.32■□□□□ 0.36
HLA-F-220ENST00000434407 RNH1P13489 461 aaKnown RBP17.32■□□□□ 0.36
HLA-F-220ENST00000434407 ZNF10P21506 573 aaPredicted RBP17.32■□□□□ 0.36
HLA-F-220ENST00000434407 ARFIP1P53367 373 aa17.32■□□□□ 0.36
HLA-F-220ENST00000434407 PLA2G16P53816 162 aa17.32■□□□□ 0.36
HLA-F-220ENST00000434407 DNAJB13P59910 316 aa17.32■□□□□ 0.36
HLA-F-220ENST00000434407 OLR1P78380 273 aa17.32■□□□□ 0.36
HLA-F-220ENST00000434407 RHAGQ02094 409 aa17.32■□□□□ 0.36
HLA-F-220ENST00000434407 TGM3Q08188 693 aa17.32■□□□□ 0.36
HLA-F-220ENST00000434407 RUNX2Q13950 521 aa17.32■□□□□ 0.36
HLA-F-220ENST00000434407 ZRSR2Q15696 482 aaKnown RBP17.32■□□□□ 0.36
HLA-F-220ENST00000434407 TUBB8Q3ZCM7 444 aa17.32■□□□□ 0.36
HLA-F-220ENST00000434407 C10orf62Q5T681 223 aaPredicted RBP17.32■□□□□ 0.36
HLA-F-220ENST00000434407 KHDRBS2Q5VWX1 349 aaKnown RBP17.32■□□□□ 0.36
HLA-F-220ENST00000434407 TCTN3Q6NUS6 607 aa17.32■□□□□ 0.36
HLA-F-220ENST00000434407 LETMD1Q6P1Q0 360 aa17.32■□□□□ 0.36
HLA-F-220ENST00000434407 CHSY3Q70JA7 882 aa17.32■□□□□ 0.36
HLA-F-220ENST00000434407 MILR1Q7Z6M3 343 aa17.32■□□□□ 0.36
HLA-F-220ENST00000434407 MYLK4Q86YV6 388 aaPredicted RBP17.32■□□□□ 0.36
HLA-F-220ENST00000434407 CA13Q8N1Q1 262 aa17.32■□□□□ 0.36
HLA-F-220ENST00000434407 OR4F6Q8NGB9 312 aa17.32■□□□□ 0.36
HLA-F-220ENST00000434407 APOPT1Q96IL0 206 aa17.32■□□□□ 0.36
HLA-F-220ENST00000434407 FAR2Q96K12 515 aa17.32■□□□□ 0.36
HLA-F-220ENST00000434407 MAGEB10Q96LZ2 347 aaPredicted RBP17.32■□□□□ 0.36
HLA-F-220ENST00000434407 KCNC2Q96PR1 638 aa17.32■□□□□ 0.36
HLA-F-220ENST00000434407 ZNF382Q96SR6 550 aa17.32■□□□□ 0.36
HLA-F-220ENST00000434407 TBCDQ9BTW9 1192 aa17.32■□□□□ 0.36
HLA-F-220ENST00000434407 SLC25A18Q9H1K4 315 aa17.32■□□□□ 0.36
HLA-F-220ENST00000434407 C12orf65Q9H3J6 166 aaKnown RBP17.32■□□□□ 0.36
HLA-F-220ENST00000434407 A0A0G2JN53 185 aa17.31■□□□□ 0.36
HLA-F-220ENST00000434407 MAGEB17A8MXT2 336 aa17.31■□□□□ 0.36
HLA-F-220ENST00000434407 C1QL1O75973 258 aa17.31■□□□□ 0.36
HLA-F-220ENST00000434407 SUPT7LO94864 414 aa17.31■□□□□ 0.36
HLA-F-220ENST00000434407 MYL2P10916 166 aa17.31■□□□□ 0.36
HLA-F-220ENST00000434407 COX6A1P12074 109 aa17.31■□□□□ 0.36
HLA-F-220ENST00000434407 ACPPP15309 386 aa17.31■□□□□ 0.36
HLA-F-220ENST00000434407 CCL11P51671 97 aa17.31■□□□□ 0.36
HLA-F-220ENST00000434407 MTTPP55157 894 aa17.31■□□□□ 0.36
HLA-F-220ENST00000434407 NAA20P61599 178 aa17.31■□□□□ 0.36
HLA-F-220ENST00000434407 AIMP2Q13155 320 aaKnown RBP17.31■□□□□ 0.36
HLA-F-220ENST00000434407 TNFAIP8L3Q5GJ75 292 aa17.31■□□□□ 0.36
HLA-F-220ENST00000434407 BEND6Q5SZJ8 279 aaPredicted RBP17.31■□□□□ 0.36
HLA-F-220ENST00000434407 FRG2Q64ET8 278 aa17.31■□□□□ 0.36
HLA-F-220ENST00000434407 ZNF793Q6ZN11 406 aa17.31■□□□□ 0.36
HLA-F-220ENST00000434407 SRRM1Q8IYB3 904 aaKnown RBP17.31■□□□□ 0.36
HLA-F-220ENST00000434407 RNF175Q8N4F7 328 aa17.31■□□□□ 0.36
HLA-F-220ENST00000434407 TRPC4APQ8TEL6 797 aa17.31■□□□□ 0.36
HLA-F-220ENST00000434407 C8orf44Q96CB5 159 aa17.31■□□□□ 0.36
HLA-F-220ENST00000434407 FRG2BQ96QU4 278 aa17.31■□□□□ 0.36
HLA-F-220ENST00000434407 SERINC2Q96SA4 455 aa17.31■□□□□ 0.36
HLA-F-220ENST00000434407 MTERF1Q99551 399 aaKnown RBP17.31■□□□□ 0.36
HLA-F-220ENST00000434407 ROGDIQ9GZN7 287 aa17.31■□□□□ 0.36
HLA-F-220ENST00000434407 OR51B5Q9H339 312 aa17.31■□□□□ 0.36
HLA-F-220ENST00000434407 OXSMQ9NWU1 459 aa17.31■□□□□ 0.36
HLA-F-220ENST00000434407 TRPS1Q9UHF7 1281 aa17.31■□□□□ 0.36
HLA-F-220ENST00000434407 IGHV1-45A0A0A0MS14 117 aa17.3■□□□□ 0.36
HLA-F-220ENST00000434407 OR2W5A6NFC9 320 aa17.3■□□□□ 0.36
HLA-F-220ENST00000434407 B3GALT2O43825 422 aa17.3■□□□□ 0.36
HLA-F-220ENST00000434407 MLYCDO95822 493 aa17.3■□□□□ 0.36
HLA-F-220ENST00000434407 HPP00738 406 aa17.3■□□□□ 0.36
HLA-F-220ENST00000434407 C8orf89P0DMQ9 161 aa17.3■□□□□ 0.36
HLA-F-220ENST00000434407 TSPAN8P19075 237 aa17.3■□□□□ 0.36
HLA-F-220ENST00000434407 ATP5A1P25705 553 aaKnown RBP17.3■□□□□ 0.36
HLA-F-220ENST00000434407 PTX3P26022 381 aaPredicted RBP17.3■□□□□ 0.36
HLA-F-220ENST00000434407 TSFMP43897 325 aaKnown RBP17.3■□□□□ 0.36
HLA-F-220ENST00000434407 RPS13P62277 151 aaKnown RBP17.3■□□□□ 0.36
HLA-F-220ENST00000434407 PHEXP78562 749 aa17.3■□□□□ 0.36
HLA-F-220ENST00000434407 CUL3Q13618 768 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms