RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 TSNARE1Q96NA8 513 aa13.89□□□□□ -0.19
PRKDC-203ENST00000432581 SPNS1Q9H2V7 528 aa13.89□□□□□ -0.19
PRKDC-203ENST00000432581 RHBGQ9H310 441 aa13.89□□□□□ -0.19
PRKDC-203ENST00000432581 TIMMDC1Q9NPL8 285 aa13.89□□□□□ -0.19
PRKDC-203ENST00000432581 NECTIN3Q9NQS3 549 aa13.89□□□□□ -0.19
PRKDC-203ENST00000432581 PLSCR2Q9NRY7 297 aa13.89□□□□□ -0.19
PRKDC-203ENST00000432581 FBXW2Q9UKT8 454 aa13.89□□□□□ -0.19
PRKDC-203ENST00000432581 CORO1CQ9ULV4 474 aaPredicted RBP13.89□□□□□ -0.19
PRKDC-203ENST00000432581 SPG11Q96JI7 2443 aa13.88□□□□□ -0.19
PRKDC-203ENST00000432581 SYNDIG1LA6NDD5 238 aa13.88□□□□□ -0.19
PRKDC-203ENST00000432581 A8MUA0 341 aa13.88□□□□□ -0.19
PRKDC-203ENST00000432581 ITGA10O75578 1167 aa13.88□□□□□ -0.19
PRKDC-203ENST00000432581 MYO1DO94832 1006 aa13.88□□□□□ -0.19
PRKDC-203ENST00000432581 TUBB4AP04350 444 aa13.88□□□□□ -0.19
PRKDC-203ENST00000432581 SMIM10L1P0DMW3 83 aa13.88□□□□□ -0.19
PRKDC-203ENST00000432581 CD1EP15812 388 aa13.88□□□□□ -0.19
PRKDC-203ENST00000432581 HNF4AP41235 474 aa13.88□□□□□ -0.19
PRKDC-203ENST00000432581 STXBP1P61764 594 aaKnown RBP13.88□□□□□ -0.19
PRKDC-203ENST00000432581 HYAL2Q12891 473 aa13.88□□□□□ -0.19
PRKDC-203ENST00000432581 RBBP5Q15291 538 aaKnown RBP13.88□□□□□ -0.19
PRKDC-203ENST00000432581 BBS9Q3SYG4 887 aa13.88□□□□□ -0.19
PRKDC-203ENST00000432581 RNASEH2BQ5TBB1 312 aaKnown RBP13.88□□□□□ -0.19
PRKDC-203ENST00000432581 PAOXQ6QHF9 649 aa13.88□□□□□ -0.19
PRKDC-203ENST00000432581 NXPE4Q6UWF7 544 aa13.88□□□□□ -0.19
PRKDC-203ENST00000432581 TMPRSS11BQ86T26 416 aa13.88□□□□□ -0.19
PRKDC-203ENST00000432581 THOC6Q86W42 341 aaKnown RBP13.88□□□□□ -0.19
PRKDC-203ENST00000432581 GPALPP1Q8IXQ4 340 aa13.88□□□□□ -0.19
PRKDC-203ENST00000432581 CA13Q8N1Q1 262 aa13.88□□□□□ -0.19
PRKDC-203ENST00000432581 MARVELD2Q8N4S9 558 aa13.88□□□□□ -0.19
PRKDC-203ENST00000432581 VMP1Q96GC9 406 aa13.88□□□□□ -0.19
PRKDC-203ENST00000432581 PDLIM5Q96HC4 596 aaKnown RBP13.88□□□□□ -0.19
PRKDC-203ENST00000432581 SMIM10Q96HG1 83 aa13.88□□□□□ -0.19
PRKDC-203ENST00000432581 CCDC77Q9BR77 488 aa13.88□□□□□ -0.19
PRKDC-203ENST00000432581 KCNJ16Q9NPI9 418 aa13.88□□□□□ -0.19
PRKDC-203ENST00000432581 PPIEQ9UNP9 301 aaKnown RBP13.88□□□□□ -0.19
PRKDC-203ENST00000432581 VWA7Q9Y334 891 aa13.88□□□□□ -0.19
PRKDC-203ENST00000432581 KCNE2Q9Y6J6 123 aa13.88□□□□□ -0.19
PRKDC-203ENST00000432581 GTF3C1Q12789 2109 aa13.88□□□□□ -0.19
PRKDC-203ENST00000432581 KRT38O76015 456 aa13.87□□□□□ -0.19
PRKDC-203ENST00000432581 MSX1P28360 303 aa13.87□□□□□ -0.19
PRKDC-203ENST00000432581 FNTAP49354 379 aa13.87□□□□□ -0.19
PRKDC-203ENST00000432581 SSR4P51571 173 aa13.87□□□□□ -0.19
PRKDC-203ENST00000432581 GPR85P60893 370 aa13.87□□□□□ -0.19
PRKDC-203ENST00000432581 TOR1AIP1Q5JTV8 583 aa13.87□□□□□ -0.19
PRKDC-203ENST00000432581 HECTD2Q5U5R9 776 aa13.87□□□□□ -0.19
PRKDC-203ENST00000432581 FAM45BPQ6NSW5 357 aa13.87□□□□□ -0.19
PRKDC-203ENST00000432581 ACAD11Q709F0 780 aa13.87□□□□□ -0.19
PRKDC-203ENST00000432581 MDGA2Q7Z553 956 aa13.87□□□□□ -0.19
PRKDC-203ENST00000432581 SCUBE1Q8IWY4 988 aa13.87□□□□□ -0.19
PRKDC-203ENST00000432581 TTLQ8NG68 377 aa13.87□□□□□ -0.19
PRKDC-203ENST00000432581 FAM45AQ8TCE6 357 aa13.87□□□□□ -0.19
PRKDC-203ENST00000432581 CREB3L4Q8TEY5 395 aa13.87□□□□□ -0.19
PRKDC-203ENST00000432581 GAL3ST3Q96A11 431 aa13.87□□□□□ -0.19
PRKDC-203ENST00000432581 CERS2Q96G23 380 aa13.87□□□□□ -0.19
PRKDC-203ENST00000432581 MS4A14Q96JA4 679 aa13.87□□□□□ -0.19
PRKDC-203ENST00000432581 PDLIM2Q96JY6 352 aa13.87□□□□□ -0.19
PRKDC-203ENST00000432581 FAR2Q96K12 515 aa13.87□□□□□ -0.19
PRKDC-203ENST00000432581 NPLQ9BXD5 320 aaPredicted RBP13.87□□□□□ -0.19
PRKDC-203ENST00000432581 KLHL31Q9H511 634 aa13.87□□□□□ -0.19
PRKDC-203ENST00000432581 SLC24A3Q9HC58 644 aa13.87□□□□□ -0.19
PRKDC-203ENST00000432581 PNO1Q9NRX1 252 aaKnown RBP13.87□□□□□ -0.19
PRKDC-203ENST00000432581 ERVK-11Q9UQG0 969 aa13.87□□□□□ -0.19
PRKDC-203ENST00000432581 RNF6Q9Y252 685 aa13.87□□□□□ -0.19
PRKDC-203ENST00000432581 YARS2Q9Y2Z4 477 aaKnown RBP13.87□□□□□ -0.19
PRKDC-203ENST00000432581 JRKLQ9Y4A0 524 aa13.87□□□□□ -0.19
PRKDC-203ENST00000432581 HRH3Q9Y5N1 445 aa13.87□□□□□ -0.19
PRKDC-203ENST00000432581 NF1P21359 2839 aa13.86□□□□□ -0.19
PRKDC-203ENST00000432581 A0A088AWK7 358 aa13.86□□□□□ -0.19
PRKDC-203ENST00000432581 GOLGA6L10A0A0M3HER8 536 aa13.86□□□□□ -0.19
PRKDC-203ENST00000432581 CTAGE15A4D2H0 777 aa13.86□□□□□ -0.19
PRKDC-203ENST00000432581 FAM90A27PA6NNH2 459 aa13.86□□□□□ -0.19
PRKDC-203ENST00000432581 A8MVJ9 347 aa13.86□□□□□ -0.19
PRKDC-203ENST00000432581 ACOT7O00154 380 aa13.86□□□□□ -0.19
PRKDC-203ENST00000432581 PGRMC1O00264 195 aaKnown RBP13.86□□□□□ -0.19
PRKDC-203ENST00000432581 CLDN4O14493 209 aa13.86□□□□□ -0.19
PRKDC-203ENST00000432581 ZFAND5O76080 213 aa13.86□□□□□ -0.19
PRKDC-203ENST00000432581 ZNF10P21506 573 aaPredicted RBP13.86□□□□□ -0.19
PRKDC-203ENST00000432581 GSTM2P28161 218 aa13.86□□□□□ -0.19
PRKDC-203ENST00000432581 HSD17B7P56937 341 aa13.86□□□□□ -0.19
PRKDC-203ENST00000432581 BTN3A2P78410 334 aa13.86□□□□□ -0.19
PRKDC-203ENST00000432581 TFF3Q07654 80 aa13.86□□□□□ -0.19
PRKDC-203ENST00000432581 PPP1R3AQ16821 1122 aa13.86□□□□□ -0.19
PRKDC-203ENST00000432581 SBSNQ6UWP8 590 aa13.86□□□□□ -0.19
PRKDC-203ENST00000432581 RGS9BPQ6ZS82 235 aa13.86□□□□□ -0.19
PRKDC-203ENST00000432581 CTAGE6Q86UF2 777 aa13.86□□□□□ -0.19
PRKDC-203ENST00000432581 PSD4Q8NDX1 1056 aa13.86□□□□□ -0.19
PRKDC-203ENST00000432581 OR52N2Q8NGI0 321 aa13.86□□□□□ -0.19
PRKDC-203ENST00000432581 NCLNQ969V3 563 aa13.86□□□□□ -0.19
PRKDC-203ENST00000432581 PPANQ9NQ55 473 aaKnown RBP13.86□□□□□ -0.19
PRKDC-203ENST00000432581 NPDC1Q9NQX5 325 aaPredicted RBP13.86□□□□□ -0.19
PRKDC-203ENST00000432581 HPF1Q9NWY4 346 aa13.86□□□□□ -0.19
PRKDC-203ENST00000432581 TNFRSF10DQ9UBN6 386 aa13.86□□□□□ -0.19
PRKDC-203ENST00000432581 ZNF223Q9UK11 482 aaPredicted RBP13.86□□□□□ -0.19
PRKDC-203ENST00000432581 SLC22A14Q9Y267 594 aa13.86□□□□□ -0.19
PRKDC-203ENST00000432581 MRPS33Q9Y291 106 aaKnown RBP13.86□□□□□ -0.19
PRKDC-203ENST00000432581 MED13LQ71F56 2210 aa13.85□□□□□ -0.19
PRKDC-203ENST00000432581 NKX2-6A6NCS4 301 aa13.85□□□□□ -0.19
PRKDC-203ENST00000432581 C4orf51C9J302 202 aa13.85□□□□□ -0.19
PRKDC-203ENST00000432581 PDE9AO76083 593 aa13.85□□□□□ -0.19
PRKDC-203ENST00000432581 TOXO94900 526 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms