RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 OR5M9Q8NGP3 310 aa2.61□□□□□ -1.99
CLK1-204ENST00000432425 TYMSOSQ8TAI1 123 aa2.61□□□□□ -1.99
CLK1-204ENST00000432425 AFAP1L1Q8TED9 768 aa2.61□□□□□ -1.99
CLK1-204ENST00000432425 MRPS27Q92552 414 aaKnown RBP2.61□□□□□ -1.99
CLK1-204ENST00000432425 ITFG2Q969R8 447 aa2.61□□□□□ -1.99
CLK1-204ENST00000432425 PAIP2Q9BPZ3 127 aaKnown RBP2.61□□□□□ -1.99
CLK1-204ENST00000432425 RBM24Q9BX46 236 aaKnown RBP2.61□□□□□ -1.99
CLK1-204ENST00000432425 URADA6NGE7 173 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 GLTPD2A6NH11 291 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 ARHGEF33A8MVX0 844 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 SH3BGRLO75368 114 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 RECQL5O94762 991 aaPredicted RBP2.6□□□□□ -1.99
CLK1-204ENST00000432425 MT-ND3P03897 115 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 CCDC175P0C221 793 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 SELEP16581 610 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 ATP6V1E1P36543 226 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 FAM174BQ3ZCQ3 159 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 LRRC73Q5JTD7 316 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 KLHL10Q6JEL2 608 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 CCBE1Q6UXH8 406 aaPredicted RBP2.6□□□□□ -1.99
CLK1-204ENST00000432425 TMUB2Q71RG4 321 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 ANKRD33Q7Z3H0 272 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 NRARPQ7Z6K4 114 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 PRUNE1Q86TP1 453 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 CCDC185Q8N715 623 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 C4orf32Q8N8J7 132 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 GOT1L1Q8NHS2 421 aaPredicted RBP2.6□□□□□ -1.99
CLK1-204ENST00000432425 RHOXF1Q8NHV9 184 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 GRK7Q8WTQ7 553 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 P2RX5Q93086 422 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 RMDN1Q96DB5 314 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 LURAP1Q96LR2 239 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 GDAP1L1Q96MZ0 367 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 TSGA13Q96PP4 275 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 SLC25A23Q9BV35 468 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 STRADBQ9C0K7 418 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 ANKRD2Q9GZV1 360 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 SUDS3Q9H7L9 328 aaPredicted RBP2.6□□□□□ -1.99
CLK1-204ENST00000432425 C3orf14Q9HBI5 128 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 CGNQ9P2M7 1197 aaKnown RBP2.6□□□□□ -1.99
CLK1-204ENST00000432425 SUN2Q9UH99 717 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 MRPS18CQ9Y3D5 142 aaKnown RBP2.6□□□□□ -1.99
CLK1-204ENST00000432425 ABCC9O60706 1549 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 NEDD4P46934 1319 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 RAD54L2Q9Y4B4 1467 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 A0A1W2PNU3 283 aaPredicted RBP2.6□□□□□ -1.99
CLK1-204ENST00000432425 ZNF840PA6NDX5 716 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 TMEM150CB9EJG8 249 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 TCP10L2B9ZVM9 353 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 INPP4BO15327 924 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 ZNF749O43361 778 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 TNFSF12O43508 249 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 APOA4P06727 396 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 CCDC159P0C7I6 412 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 LMO2P25791 158 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 DUTP33316 252 aaKnown RBP2.6□□□□□ -1.99
CLK1-204ENST00000432425 RGS7P49802 495 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 IL10RBQ08334 325 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 MLF2Q15773 248 aaPredicted RBP2.6□□□□□ -1.99
CLK1-204ENST00000432425 KYNUQ16719 465 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 SHROOM1Q2M3G4 852 aaPredicted RBP2.6□□□□□ -1.99
CLK1-204ENST00000432425 SPANXN4Q5MJ08 99 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 AGAP7PQ5VUJ5 663 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 IRGCQ6NXR0 463 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 DHRS11Q6UWP2 260 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 PPP1R21Q6ZMI0 780 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 KRT74Q7RTS7 529 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 IQCA1Q86XH1 822 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 RTL3Q8N8U3 475 aaKnown RBP2.6□□□□□ -1.99
CLK1-204ENST00000432425 CSNK1G2-AS1Q8NCQ2 148 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 SSC4DQ8WTU2 575 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 GIMAP1Q8WWP7 306 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 RBM18Q96H35 190 aaKnown RBP2.6□□□□□ -1.99
CLK1-204ENST00000432425 HNRNPABQ99729 332 aaKnown RBP2.6□□□□□ -1.99
CLK1-204ENST00000432425 KATNB1Q9BVA0 655 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 PAPOLGQ9BWT3 736 aaKnown RBP2.6□□□□□ -1.99
CLK1-204ENST00000432425 C2orf40Q9H1Z8 148 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 OR10A4Q9H209 315 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 MOB1AQ9H8S9 216 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 RPF1Q9H9Y2 349 aaKnown RBP2.6□□□□□ -1.99
CLK1-204ENST00000432425 PHPT1Q9NRX4 125 aaPredicted RBP2.6□□□□□ -1.99
CLK1-204ENST00000432425 HOXC10Q9NYD6 342 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 CFDP1Q9UEE9 299 aaPredicted RBP2.6□□□□□ -1.99
CLK1-204ENST00000432425 FBXL5Q9UKA1 691 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 PILRAQ9UKJ1 303 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 BLOC1S6Q9UL45 172 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 AGTPBP1Q9UPW5 1226 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 AUP1Q9Y679 476 aa2.6□□□□□ -1.99
CLK1-204ENST00000432425 A0A087WWV3 80 aa2.59□□□□□ -2
CLK1-204ENST00000432425 E5RGE8 158 aa2.59□□□□□ -2
CLK1-204ENST00000432425 H3BMM5 538 aa2.59□□□□□ -2
CLK1-204ENST00000432425 ZNF354AO60765 605 aaPredicted RBP2.59□□□□□ -2
CLK1-204ENST00000432425 SKILP12757 684 aa2.59□□□□□ -2
CLK1-204ENST00000432425 ATP6V1B1P15313 513 aa2.59□□□□□ -2
CLK1-204ENST00000432425 EEF1DP29692 281 aaKnown RBP2.59□□□□□ -2
CLK1-204ENST00000432425 MFAP3P55082 362 aa2.59□□□□□ -2
CLK1-204ENST00000432425 DMTNQ08495 405 aa2.59□□□□□ -2
CLK1-204ENST00000432425 AP1B1Q10567 949 aa2.59□□□□□ -2
CLK1-204ENST00000432425 COG2Q14746 738 aa2.59□□□□□ -2
CLK1-204ENST00000432425 PSMD6Q15008 389 aa2.59□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms