RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 PLA2G15Q8NCC3 412 aa12.42□□□□□ -0.42
PTCH1-207ENST00000429896 ZNF248Q8NDW4 579 aa12.42□□□□□ -0.42
PTCH1-207ENST00000429896 C7orf57Q8NEG2 295 aa12.42□□□□□ -0.42
PTCH1-207ENST00000429896 POP5Q969H6 163 aaKnown RBP12.42□□□□□ -0.42
PTCH1-207ENST00000429896 AKTIPQ9H8T0 292 aa12.42□□□□□ -0.42
PTCH1-207ENST00000429896 MYH10P35580 1976 aa12.41□□□□□ -0.42
PTCH1-207ENST00000429896 PPP2R2BQ00005 443 aa12.41□□□□□ -0.42
PTCH1-207ENST00000429896 HYAL2Q12891 473 aa12.41□□□□□ -0.42
PTCH1-207ENST00000429896 CTSL3PQ5NE16 218 aa12.41□□□□□ -0.42
PTCH1-207ENST00000429896 C1orf189Q5VU69 101 aa12.41□□□□□ -0.42
PTCH1-207ENST00000429896 NRROSQ86YC3 692 aa12.41□□□□□ -0.42
PTCH1-207ENST00000429896 PPM1MQ96MI6 270 aa12.41□□□□□ -0.42
PTCH1-207ENST00000429896 TMEM74Q96NL1 305 aa12.41□□□□□ -0.42
PTCH1-207ENST00000429896 INSM2Q96T92 566 aaPredicted RBP12.41□□□□□ -0.42
PTCH1-207ENST00000429896 GPER1Q99527 375 aa12.41□□□□□ -0.42
PTCH1-207ENST00000429896 ARRDC1-AS1Q9H2J1 176 aa12.41□□□□□ -0.42
PTCH1-207ENST00000429896 FBRSL1Q9HCM7 1045 aaKnown RBP12.41□□□□□ -0.42
PTCH1-207ENST00000429896 TRNAU1APQ9NX07 287 aaKnown RBP12.41□□□□□ -0.42
PTCH1-207ENST00000429896 ENOPH1Q9UHY7 261 aa12.41□□□□□ -0.42
PTCH1-207ENST00000429896 ZNF860A6NHJ4 632 aa12.41□□□□□ -0.42
PTCH1-207ENST00000429896 BTN3A3O00478 584 aa12.41□□□□□ -0.42
PTCH1-207ENST00000429896 MGRN1O60291 552 aa12.41□□□□□ -0.42
PTCH1-207ENST00000429896 AOAHP28039 575 aa12.41□□□□□ -0.42
PTCH1-207ENST00000429896 PGGT1BP53609 377 aa12.41□□□□□ -0.42
PTCH1-207ENST00000429896 CDC42P60953 191 aa12.41□□□□□ -0.42
PTCH1-207ENST00000429896 DOC2AQ14183 400 aa12.41□□□□□ -0.42
PTCH1-207ENST00000429896 SLC9B1Q4ZJI4 515 aa12.41□□□□□ -0.42
PTCH1-207ENST00000429896 REP15Q6BDI9 236 aa12.41□□□□□ -0.42
PTCH1-207ENST00000429896 FUBP1Q96AE4 644 aaKnown RBP12.41□□□□□ -0.42
PTCH1-207ENST00000429896 IGSF5Q9NSI5 407 aa12.41□□□□□ -0.42
PTCH1-207ENST00000429896 TIPRLO75663 272 aa12.41□□□□□ -0.42
PTCH1-207ENST00000429896 FGL2Q14314 439 aa12.41□□□□□ -0.42
PTCH1-207ENST00000429896 KIAA1211LQ6NV74 962 aa12.41□□□□□ -0.42
PTCH1-207ENST00000429896 LCTLQ6UWM7 567 aa12.41□□□□□ -0.42
PTCH1-207ENST00000429896 DNAJB8Q8NHS0 232 aa12.41□□□□□ -0.42
PTCH1-207ENST00000429896 KCNA7Q96RP8 456 aa12.41□□□□□ -0.42
PTCH1-207ENST00000429896 COPS4Q9BT78 406 aa12.41□□□□□ -0.42
PTCH1-207ENST00000429896 SH3D21A4FU49 640 aa12.41□□□□□ -0.42
PTCH1-207ENST00000429896 CPSF4LA6NMK7 179 aaKnown RBP12.41□□□□□ -0.42
PTCH1-207ENST00000429896 TMEM233B4DJY2 109 aa12.41□□□□□ -0.42
PTCH1-207ENST00000429896 PGM3O95394 542 aa12.41□□□□□ -0.42
PTCH1-207ENST00000429896 CTSLP07711 333 aa12.41□□□□□ -0.42
PTCH1-207ENST00000429896 MAZP56270 477 aaKnown RBP12.41□□□□□ -0.42
PTCH1-207ENST00000429896 WDR4P57081 412 aaKnown RBP12.41□□□□□ -0.42
PTCH1-207ENST00000429896 PIP5KL1Q5T9C9 394 aa12.41□□□□□ -0.42
PTCH1-207ENST00000429896 CNTN4Q8IWV2 1026 aa12.41□□□□□ -0.42
PTCH1-207ENST00000429896 FITM2Q8N6M3 262 aa12.41□□□□□ -0.42
PTCH1-207ENST00000429896 PNPLA1Q8N8W4 532 aa12.41□□□□□ -0.42
PTCH1-207ENST00000429896 SETD9Q8NE22 299 aa12.41□□□□□ -0.42
PTCH1-207ENST00000429896 TSPAN14Q8NG11 270 aa12.41□□□□□ -0.42
PTCH1-207ENST00000429896 FAM129BQ96TA1 746 aa12.41□□□□□ -0.42
PTCH1-207ENST00000429896 CMKLR1Q99788 373 aa12.41□□□□□ -0.42
PTCH1-207ENST00000429896 SEC14L3Q9UDX4 400 aa12.41□□□□□ -0.42
PTCH1-207ENST00000429896 A0A1W2PPC4 97 aa12.41□□□□□ -0.42
PTCH1-207ENST00000429896 MMP2P08253 660 aa12.41□□□□□ -0.42
PTCH1-207ENST00000429896 YAP1P46937 504 aaKnown RBP12.41□□□□□ -0.42
PTCH1-207ENST00000429896 ARHGAP19Q14CB8 494 aa12.41□□□□□ -0.42
PTCH1-207ENST00000429896 ADRM1Q16186 407 aa12.41□□□□□ -0.42
PTCH1-207ENST00000429896 TMEM35AQ53FP2 167 aa12.41□□□□□ -0.42
PTCH1-207ENST00000429896 KRT74Q7RTS7 529 aa12.41□□□□□ -0.42
PTCH1-207ENST00000429896 DTWD2Q8NBA8 298 aa12.41□□□□□ -0.42
PTCH1-207ENST00000429896 ADAMTS18Q8TE60 1221 aa12.41□□□□□ -0.42
PTCH1-207ENST00000429896 CNDP2Q96KP4 475 aaKnown RBP12.41□□□□□ -0.42
PTCH1-207ENST00000429896 ZDHHC5Q9C0B5 715 aa12.41□□□□□ -0.42
PTCH1-207ENST00000429896 ABCB9Q9NP78 766 aa12.41□□□□□ -0.42
PTCH1-207ENST00000429896 OR6C2Q9NZP2 312 aa12.41□□□□□ -0.42
PTCH1-207ENST00000429896 DUXAA6NLW8 204 aa12.4□□□□□ -0.42
PTCH1-207ENST00000429896 NKD1Q969G9 470 aa12.4□□□□□ -0.42
PTCH1-207ENST00000429896 ZNF184Q99676 751 aaPredicted RBP12.4□□□□□ -0.42
PTCH1-207ENST00000429896 GSTK1Q9Y2Q3 226 aa12.4□□□□□ -0.42
PTCH1-207ENST00000429896 A8MUI8 341 aa12.4□□□□□ -0.42
PTCH1-207ENST00000429896 POLR1CO15160 346 aaPredicted RBP12.4□□□□□ -0.42
PTCH1-207ENST00000429896 GIMD1P0DJR0 217 aa12.4□□□□□ -0.42
PTCH1-207ENST00000429896 CR2P20023 1033 aa12.4□□□□□ -0.42
PTCH1-207ENST00000429896 PTDSS1P48651 473 aaKnown RBP12.4□□□□□ -0.42
PTCH1-207ENST00000429896 SLC7A2P52569 658 aa12.4□□□□□ -0.42
PTCH1-207ENST00000429896 UGT2B15P54855 530 aa12.4□□□□□ -0.42
PTCH1-207ENST00000429896 PPP2CBP62714 309 aa12.4□□□□□ -0.42
PTCH1-207ENST00000429896 PPP2CAP67775 309 aa12.4□□□□□ -0.42
PTCH1-207ENST00000429896 DEFB134Q4QY38 66 aa12.4□□□□□ -0.42
PTCH1-207ENST00000429896 HENMT1Q5T8I9 393 aaKnown RBP12.4□□□□□ -0.42
PTCH1-207ENST00000429896 ZFP1Q6P2D0 407 aa12.4□□□□□ -0.42
PTCH1-207ENST00000429896 ULK3Q6PHR2 472 aa12.4□□□□□ -0.42
PTCH1-207ENST00000429896 TMEM156Q8N614 296 aa12.4□□□□□ -0.42
PTCH1-207ENST00000429896 TEX47Q8TBZ9 253 aa12.4□□□□□ -0.42
PTCH1-207ENST00000429896 BIRC7Q96CA5 298 aa12.4□□□□□ -0.42
PTCH1-207ENST00000429896 LRRC3Q9BY71 257 aa12.4□□□□□ -0.42
PTCH1-207ENST00000429896 RBCK1Q9BYM8 510 aa12.4□□□□□ -0.42
PTCH1-207ENST00000429896 PCED1AQ9H1Q7 454 aa12.4□□□□□ -0.42
PTCH1-207ENST00000429896 PDYNP01213 254 aa12.4□□□□□ -0.42
PTCH1-207ENST00000429896 RPLP0P05388 317 aaKnown RBP12.4□□□□□ -0.42
PTCH1-207ENST00000429896 HSD3B1P14060 373 aa12.4□□□□□ -0.42
PTCH1-207ENST00000429896 HSD3B2P26439 372 aa12.4□□□□□ -0.42
PTCH1-207ENST00000429896 CDKL4Q5MAI5 379 aa12.4□□□□□ -0.42
PTCH1-207ENST00000429896 AGBL4Q5VU57 503 aa12.4□□□□□ -0.42
PTCH1-207ENST00000429896 CLIP4Q8N3C7 705 aa12.4□□□□□ -0.42
PTCH1-207ENST00000429896 RSPRY1Q96DX4 576 aa12.4□□□□□ -0.42
PTCH1-207ENST00000429896 PRR11Q96HE9 360 aaPredicted RBP12.4□□□□□ -0.42
PTCH1-207ENST00000429896 C5orf34Q96MH7 638 aa12.4□□□□□ -0.42
PTCH1-207ENST00000429896 COMMD9Q9P000 198 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms