RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 TUBA8Q9NY65 449 aaPredicted RBP8.02□□□□□ -1.13
CD44-208ENST00000428726 MED12Q93074 2177 aa8.02□□□□□ -1.13
CD44-208ENST00000428726 HEATR5BQ9P2D3 2071 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 LINC00854A0A1B0GVQ3 168 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 KIAA0355O15063 1070 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 NOL3O60936 208 aaKnown RBP8.01□□□□□ -1.13
CD44-208ENST00000428726 ADH1CP00326 375 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 ASGR2P07307 311 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 MPC1LP0DKB6 136 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 PTPN6P29350 595 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 DAPP51397 102 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 NKX2-5P52952 324 aaPredicted RBP8.01□□□□□ -1.13
CD44-208ENST00000428726 HTRA4P83105 476 aaPredicted RBP8.01□□□□□ -1.13
CD44-208ENST00000428726 C1orf61Q13536 156 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 FGL2Q14314 439 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 SPDYE7PQ495Y7 208 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 ZBED5Q49AG3 693 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 GGTA1PQ4G0N0 100 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 FBXO46Q6PJ61 603 aaPredicted RBP8.01□□□□□ -1.13
CD44-208ENST00000428726 PTOV1Q86YD1 416 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 CENPSQ8N2Z9 138 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 ASB16Q96NS5 453 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 MBOAT4Q96T53 435 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 UGT2B28Q9BY64 529 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 SLC6A16Q9GZN6 736 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 GORASP2Q9H8Y8 452 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 FBXL12Q9NXK8 326 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 TBC1D14Q9P2M4 693 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 ZNF639Q9UID6 485 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 DYRK1BQ9Y463 629 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 PLXNB3Q9ULL4 1909 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 LOC100130705A0A1B0GUX0 176 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 SLC16A5O15375 505 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 BMP10O95393 424 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 IGFBP5P24593 272 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 KDELR2P33947 212 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 ST13P50502 369 aaKnown RBP8.01□□□□□ -1.13
CD44-208ENST00000428726 CRYBA2P53672 197 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 VBP1P61758 197 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 SP140Q13342 867 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 GBX1Q14549 363 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 SPCS2Q15005 226 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 DUSP7Q16829 419 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 HNRNPA1L2Q32P51 320 aaKnown RBP8.01□□□□□ -1.13
CD44-208ENST00000428726 PLEKHS1Q5SXH7 462 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 CCNYL2Q5T2Q4 361 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 MED27Q6P2C8 311 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 KIAA1324Q6UXG2 1013 aaKnown RBP8.01□□□□□ -1.13
CD44-208ENST00000428726 SLCO4C1Q6ZQN7 724 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 AMZ2Q86W34 360 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 TRAM1L1Q8N609 369 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 ARL10Q8N8L6 244 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 ANKRD53Q8N9V6 530 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 KCT2Q8NC54 265 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 PIK3C3Q8NEB9 887 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 DDHD1Q8NEL9 900 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 OR8K5Q8NH50 307 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 TBC1D15Q8TC07 691 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 OTULINQ96BN8 352 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 PYURFQ96I23 114 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 ALOXE3Q9BYJ1 711 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 RMND5AQ9H871 391 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 SLAMF7Q9NQ25 335 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 TBC1D23Q9NUY8 699 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 DCAF13Q9NV06 445 aaKnown RBP8.01□□□□□ -1.13
CD44-208ENST00000428726 SPHK1Q9NYA1 384 aa8.01□□□□□ -1.13
CD44-208ENST00000428726 SLC5A10A0PJK1 596 aa8□□□□□ -1.13
CD44-208ENST00000428726 MYO1DO94832 1006 aa8□□□□□ -1.13
CD44-208ENST00000428726 SLCO2B1O94956 709 aa8□□□□□ -1.13
CD44-208ENST00000428726 LCKP06239 509 aa8□□□□□ -1.13
CD44-208ENST00000428726 BCHEP06276 602 aa8□□□□□ -1.13
CD44-208ENST00000428726 PRPS2P11908 318 aa8□□□□□ -1.13
CD44-208ENST00000428726 ZNF30P17039 623 aa8□□□□□ -1.13
CD44-208ENST00000428726 DDX5P17844 614 aaKnown RBP8□□□□□ -1.13
CD44-208ENST00000428726 IGFBP4P22692 258 aa8□□□□□ -1.13
CD44-208ENST00000428726 DDX6P26196 483 aaKnown RBP eCLIP8□□□□□ -1.13
CD44-208ENST00000428726 MLLT1Q03111 559 aaPredicted RBP8□□□□□ -1.13
CD44-208ENST00000428726 PPIGQ13427 754 aaKnown RBP eCLIP8□□□□□ -1.13
CD44-208ENST00000428726 DMC1Q14565 340 aa8□□□□□ -1.13
CD44-208ENST00000428726 PPP2R2DQ66LE6 453 aa8□□□□□ -1.13
CD44-208ENST00000428726 CAPN13Q6MZZ7 669 aaPredicted RBP8□□□□□ -1.13
CD44-208ENST00000428726 DEF8Q6ZN54 512 aa8□□□□□ -1.13
CD44-208ENST00000428726 ERN2Q76MJ5 926 aaKnown RBP8□□□□□ -1.13
CD44-208ENST00000428726 PLPP6Q8IY26 295 aa8□□□□□ -1.13
CD44-208ENST00000428726 EID3Q8N140 333 aa8□□□□□ -1.13
CD44-208ENST00000428726 FAM160A2Q8N612 972 aaPredicted RBP8□□□□□ -1.13
CD44-208ENST00000428726 WDR20Q8TBZ3 569 aa8□□□□□ -1.13
CD44-208ENST00000428726 MAGEB10Q96LZ2 347 aaPredicted RBP8□□□□□ -1.13
CD44-208ENST00000428726 ZDHHC5Q9C0B5 715 aa8□□□□□ -1.13
CD44-208ENST00000428726 C6orf106Q9H6K1 298 aaPredicted RBP8□□□□□ -1.13
CD44-208ENST00000428726 PLGRKTQ9HBL7 147 aa8□□□□□ -1.13
CD44-208ENST00000428726 HELZP42694 1942 aaKnown RBP8□□□□□ -1.13
CD44-208ENST00000428726 ZNF197O14709 1029 aa8□□□□□ -1.13
CD44-208ENST00000428726 PCDH17O14917 1159 aa8□□□□□ -1.13
CD44-208ENST00000428726 GMFGO60234 142 aa8□□□□□ -1.13
CD44-208ENST00000428726 ERN1O75460 977 aaKnown RBP8□□□□□ -1.13
CD44-208ENST00000428726 FGF19O95750 216 aa8□□□□□ -1.13
CD44-208ENST00000428726 BCL10O95999 233 aa8□□□□□ -1.13
CD44-208ENST00000428726 GSTM1P09488 218 aa8□□□□□ -1.13
CD44-208ENST00000428726 PVRP15151 417 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms