RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 RAB8AP61006 207 aa16.27■□□□□ 0.2
DDR1-235ENST00000428153 BTG2P78543 158 aa16.27■□□□□ 0.2
DDR1-235ENST00000428153 CBLBQ13191 982 aa16.27■□□□□ 0.2
DDR1-235ENST00000428153 TRMT10BQ6PF06 316 aaKnown RBP16.27■□□□□ 0.2
DDR1-235ENST00000428153 ADAMTSL2Q86TH1 951 aa16.27■□□□□ 0.2
DDR1-235ENST00000428153 DOLPP1Q86YN1 238 aa16.27■□□□□ 0.2
DDR1-235ENST00000428153 SCUBE1Q8IWY4 988 aa16.27■□□□□ 0.2
DDR1-235ENST00000428153 CYP4X1Q8N118 509 aa16.27■□□□□ 0.2
DDR1-235ENST00000428153 CPSF7Q8N684 471 aaKnown RBP16.27■□□□□ 0.2
DDR1-235ENST00000428153 AGAP11Q8TF27 550 aa16.27■□□□□ 0.2
DDR1-235ENST00000428153 C14orf79Q96F83 325 aa16.27■□□□□ 0.2
DDR1-235ENST00000428153 TSNARE1Q96NA8 513 aa16.27■□□□□ 0.2
DDR1-235ENST00000428153 DMRTA2Q96SC8 542 aa16.27■□□□□ 0.2
DDR1-235ENST00000428153 CAPS2Q9BXY5 557 aa16.27■□□□□ 0.2
DDR1-235ENST00000428153 TSPAN10Q9H1Z9 355 aaPredicted RBP16.27■□□□□ 0.2
DDR1-235ENST00000428153 POPDC3Q9HBV1 291 aa16.27■□□□□ 0.2
DDR1-235ENST00000428153 NECTIN3Q9NQS3 549 aa16.27■□□□□ 0.2
DDR1-235ENST00000428153 SLC17A6Q9P2U8 582 aa16.27■□□□□ 0.2
DDR1-235ENST00000428153 SLC22A14Q9Y267 594 aa16.27■□□□□ 0.2
DDR1-235ENST00000428153 ZSCAN12O43309 604 aa16.26■□□□□ 0.19
DDR1-235ENST00000428153 B3GALT4O96024 378 aa16.26■□□□□ 0.19
DDR1-235ENST00000428153 CAPN3P20807 821 aa16.26■□□□□ 0.19
DDR1-235ENST00000428153 MAOAP21397 527 aa16.26■□□□□ 0.19
DDR1-235ENST00000428153 ITGA8P53708 1063 aa16.26■□□□□ 0.19
DDR1-235ENST00000428153 ARL4CP56559 192 aa16.26■□□□□ 0.19
DDR1-235ENST00000428153 MGAT5Q09328 741 aa16.26■□□□□ 0.19
DDR1-235ENST00000428153 RBBP5Q15291 538 aaKnown RBP16.26■□□□□ 0.19
DDR1-235ENST00000428153 RNFT1Q5M7Z0 435 aa16.26■□□□□ 0.19
DDR1-235ENST00000428153 ZC3HC1Q86WB0 502 aaKnown RBP16.26■□□□□ 0.19
DDR1-235ENST00000428153 CA13Q8N1Q1 262 aa16.26■□□□□ 0.19
DDR1-235ENST00000428153 ZFP62Q8NB50 900 aaPredicted RBP16.26■□□□□ 0.19
DDR1-235ENST00000428153 VMP1Q96GC9 406 aa16.26■□□□□ 0.19
DDR1-235ENST00000428153 VPS39Q96JC1 886 aa16.26■□□□□ 0.19
DDR1-235ENST00000428153 FAR2Q96K12 515 aa16.26■□□□□ 0.19
DDR1-235ENST00000428153 ENKD1Q9H0I2 346 aa16.26■□□□□ 0.19
DDR1-235ENST00000428153 NT5DC2Q9H857 520 aa16.26■□□□□ 0.19
DDR1-235ENST00000428153 NSMCE4AQ9NXX6 385 aa16.26■□□□□ 0.19
DDR1-235ENST00000428153 IKZF3Q9UKT9 509 aa16.26■□□□□ 0.19
DDR1-235ENST00000428153 CHMP2BQ9UQN3 213 aa16.26■□□□□ 0.19
DDR1-235ENST00000428153 HIVEP1P15822 2718 aa16.26■□□□□ 0.19
DDR1-235ENST00000428153 CLDN4O14493 209 aa16.25■□□□□ 0.19
DDR1-235ENST00000428153 ADAM10O14672 748 aa16.25■□□□□ 0.19
DDR1-235ENST00000428153 H2AFYO75367 372 aaKnown RBP16.25■□□□□ 0.19
DDR1-235ENST00000428153 C1GALT1C1LP0DN25 315 aa16.25■□□□□ 0.19
DDR1-235ENST00000428153 POU3F2P20265 443 aaPredicted RBP16.25■□□□□ 0.19
DDR1-235ENST00000428153 CDKL4Q5MAI5 379 aa16.25■□□□□ 0.19
DDR1-235ENST00000428153 TMIGD1Q6UXZ0 262 aa16.25■□□□□ 0.19
DDR1-235ENST00000428153 GPALPP1Q8IXQ4 340 aa16.25■□□□□ 0.19
DDR1-235ENST00000428153 ZNF295-AS1Q8N0V1 137 aa16.25■□□□□ 0.19
DDR1-235ENST00000428153 CFAP36Q96G28 342 aa16.25■□□□□ 0.19
DDR1-235ENST00000428153 EGFL8Q99944 293 aa16.25■□□□□ 0.19
DDR1-235ENST00000428153 TREX2Q9BQ50 279 aaPredicted RBP16.25■□□□□ 0.19
DDR1-235ENST00000428153 WDR83Q9BRX9 315 aaKnown RBP16.25■□□□□ 0.19
DDR1-235ENST00000428153 EHD1Q9H4M9 534 aa16.25■□□□□ 0.19
DDR1-235ENST00000428153 KLHL31Q9H511 634 aa16.25■□□□□ 0.19
DDR1-235ENST00000428153 PLSCR2Q9NRY7 297 aa16.25■□□□□ 0.19
DDR1-235ENST00000428153 MOCS1Q9NZB8 636 aa16.25■□□□□ 0.19
DDR1-235ENST00000428153 GPRC5BQ9NZH0 403 aa16.25■□□□□ 0.19
DDR1-235ENST00000428153 COQ3Q9NZJ6 369 aa16.25■□□□□ 0.19
DDR1-235ENST00000428153 MRPS33Q9Y291 106 aaKnown RBP16.25■□□□□ 0.19
DDR1-235ENST00000428153 FAM95CA0A1B0GW59 222 aa16.24■□□□□ 0.19
DDR1-235ENST00000428153 CTAGE15A4D2H0 777 aa16.24■□□□□ 0.19
DDR1-235ENST00000428153 LRIT2A6NDA9 550 aa16.24■□□□□ 0.19
DDR1-235ENST00000428153 C4orf51C9J302 202 aa16.24■□□□□ 0.19
DDR1-235ENST00000428153 CDC7O00311 574 aa16.24■□□□□ 0.19
DDR1-235ENST00000428153 TFECO14948 347 aaPredicted RBP16.24■□□□□ 0.19
DDR1-235ENST00000428153 CLEC3AO75596 197 aa16.24■□□□□ 0.19
DDR1-235ENST00000428153 PTGS2P35354 604 aa16.24■□□□□ 0.19
DDR1-235ENST00000428153 HNF4AP41235 474 aa16.24■□□□□ 0.19
DDR1-235ENST00000428153 SLC6A12P48065 614 aa16.24■□□□□ 0.19
DDR1-235ENST00000428153 MEOX1P50221 254 aa16.24■□□□□ 0.19
DDR1-235ENST00000428153 ST13P50502 369 aaKnown RBP16.24■□□□□ 0.19
DDR1-235ENST00000428153 GPR143P51810 404 aa16.24■□□□□ 0.19
DDR1-235ENST00000428153 PGGT1BP53609 377 aa16.24■□□□□ 0.19
DDR1-235ENST00000428153 RCN2Q14257 317 aa16.24■□□□□ 0.19
DDR1-235ENST00000428153 ADPRMQ3LIE5 342 aa16.24■□□□□ 0.19
DDR1-235ENST00000428153 TOR1AIP1Q5JTV8 583 aa16.24■□□□□ 0.19
DDR1-235ENST00000428153 SLCO4C1Q6ZQN7 724 aa16.24■□□□□ 0.19
DDR1-235ENST00000428153 FRA10AC1Q70Z53 315 aa16.24■□□□□ 0.19
DDR1-235ENST00000428153 CTAGE6Q86UF2 777 aa16.24■□□□□ 0.19
DDR1-235ENST00000428153 SULF2Q8IWU5 870 aa16.24■□□□□ 0.19
DDR1-235ENST00000428153 ZNF595Q8IYB9 648 aa16.24■□□□□ 0.19
DDR1-235ENST00000428153 CYP4Z2PQ8N1L4 340 aa16.24■□□□□ 0.19
DDR1-235ENST00000428153 KRT78Q8N1N4 520 aa16.24■□□□□ 0.19
DDR1-235ENST00000428153 TCAIMQ8N3R3 496 aa16.24■□□□□ 0.19
DDR1-235ENST00000428153 TMEM156Q8N614 296 aa16.24■□□□□ 0.19
DDR1-235ENST00000428153 C7orf57Q8NEG2 295 aa16.24■□□□□ 0.19
DDR1-235ENST00000428153 FAM57AQ8TBR7 257 aa16.24■□□□□ 0.19
DDR1-235ENST00000428153 RHBDF1Q96CC6 855 aa16.24■□□□□ 0.19
DDR1-235ENST00000428153 MS4A6EQ96DS6 147 aa16.24■□□□□ 0.19
DDR1-235ENST00000428153 PDLIM2Q96JY6 352 aa16.24■□□□□ 0.19
DDR1-235ENST00000428153 CCDC77Q9BR77 488 aa16.24■□□□□ 0.19
DDR1-235ENST00000428153 AICDAQ9GZX7 198 aa16.24■□□□□ 0.19
DDR1-235ENST00000428153 ADAP2Q9NPF8 381 aa16.24■□□□□ 0.19
DDR1-235ENST00000428153 YARS2Q9Y2Z4 477 aaKnown RBP16.24■□□□□ 0.19
DDR1-235ENST00000428153 C2CD3Q4AC94 2353 aa16.23■□□□□ 0.19
DDR1-235ENST00000428153 TRBV11-1A0A0K0K1C0 115 aa16.23■□□□□ 0.19
DDR1-235ENST00000428153 E7ESA3 106 aa16.23■□□□□ 0.19
DDR1-235ENST00000428153 ITGA10O75578 1167 aa16.23■□□□□ 0.19
DDR1-235ENST00000428153 ZFAND5O76080 213 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms