RNA–Protein interactions for RNA: ENST00000428136.1

LRCH3-204, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 3,205 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-204ENST00000428136 TMEM159Q96B96 161 aa7.54□□□□□ -1.2
LRCH3-204ENST00000428136 ABHD8Q96I13 439 aa7.54□□□□□ -1.2
LRCH3-204ENST00000428136 MRGPRX3Q96LB0 322 aa7.54□□□□□ -1.2
LRCH3-204ENST00000428136 SAMD11Q96NU1 681 aa7.54□□□□□ -1.2
LRCH3-204ENST00000428136 SLC35A5Q9BS91 424 aa7.54□□□□□ -1.2
LRCH3-204ENST00000428136 EFCAB11Q9BUY7 163 aa7.54□□□□□ -1.2
LRCH3-204ENST00000428136 DMRT3Q9NQL9 472 aa7.54□□□□□ -1.2
LRCH3-204ENST00000428136 GPR83Q9NYM4 423 aa7.54□□□□□ -1.2
LRCH3-204ENST00000428136 SPG21Q9NZD8 308 aa7.54□□□□□ -1.2
LRCH3-204ENST00000428136 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.54□□□□□ -1.2
LRCH3-204ENST00000428136 IFT52Q9Y366 437 aa7.54□□□□□ -1.2
LRCH3-204ENST00000428136 PEX16Q9Y5Y5 336 aa7.54□□□□□ -1.2
LRCH3-204ENST00000428136 HTR3EA5X5Y0 456 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 CACNB4O00305 520 aaPredicted RBP7.53□□□□□ -1.2
LRCH3-204ENST00000428136 HAT1O14929 419 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 TGM5O43548 720 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 TBX19O60806 448 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 LILRB5O75023 590 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 PTHP01270 115 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 RHCEP18577 417 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 LAG3P18627 525 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 AQP1P29972 269 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 PIK3CBP42338 1070 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 CRATP43155 626 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 MAGEA10P43363 369 aaPredicted RBP7.53□□□□□ -1.2
LRCH3-204ENST00000428136 BDKRB1P46663 353 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 TMED10P49755 219 aaKnown RBP7.53□□□□□ -1.2
LRCH3-204ENST00000428136 UGT2B15P54855 530 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 SPIBQ01892 262 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 FPGSQ05932 587 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 ST3GAL4Q11206 333 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 DDX39BQ13838 428 aaKnown RBP7.53□□□□□ -1.2
LRCH3-204ENST00000428136 PRSS53Q2L4Q9 553 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 LRRC73Q5JTD7 316 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 TPRG1LQ5T0D9 272 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 TRIM40Q6P9F5 258 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 CNKSR3Q6P9H4 555 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 IKBIPQ70UQ0 350 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 TMEM25Q86YD3 366 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 PARP16Q8N5Y8 322 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 SCAIQ8N9R8 606 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 GALNT6Q8NCL4 622 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 NFKBIDQ8NI38 313 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 C16orf78Q8WTQ4 265 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 ZNF480Q8WV37 535 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 AUTS2Q8WXX7 1259 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 MED8Q96G25 268 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 LRIG1Q96JA1 1093 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 SLC25A19Q9HC21 320 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 QPCTLQ9NXS2 382 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 RAPGEFL1Q9UHV5 662 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 MKLN1Q9UL63 735 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 ENPP4Q9Y6X5 453 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 A0A075B6Q4 140 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 OR2AG2A6NM03 316 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 TLL1O43897 1013 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 C6orf47O95873 294 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 C1GALT1C1LP0DN25 315 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 ENDOUP21128 410 aaKnown RBP7.53□□□□□ -1.2
LRCH3-204ENST00000428136 PREPP48147 710 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 CDH12P55289 794 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 CDK6Q00534 326 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 TMEM115Q12893 351 aaPredicted RBP7.53□□□□□ -1.2
LRCH3-204ENST00000428136 PTGES3Q15185 160 aaKnown RBP7.53□□□□□ -1.2
LRCH3-204ENST00000428136 SYTL3Q4VX76 610 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 ARMCX4Q5H9R4 360 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 ZNF648Q5T619 568 aaPredicted RBP7.53□□□□□ -1.2
LRCH3-204ENST00000428136 OTOP2Q7RTS6 562 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 CCDC190Q86UF4 302 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 REM2Q8IYK8 340 aaPredicted RBP7.53□□□□□ -1.2
LRCH3-204ENST00000428136 IL17RCQ8NAC3 791 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 B3GNT7Q8NFL0 401 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 DHRS1Q96LJ7 313 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 WRAP53Q9BUR4 548 aaKnown RBP7.53□□□□□ -1.2
LRCH3-204ENST00000428136 SIAEQ9HAT2 523 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 TAS2R9Q9NYW1 312 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 SH3BP4Q9P0V3 963 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 KIF26AQ9ULI4 1882 aaPredicted RBP7.53□□□□□ -1.2
LRCH3-204ENST00000428136 TRAPPC4Q9Y296 219 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 ZNF451Q9Y4E5 1061 aa7.53□□□□□ -1.2
LRCH3-204ENST00000428136 PCM1Q15154 2024 aa7.52□□□□□ -1.2
LRCH3-204ENST00000428136 PRAMEF33A0A0G2JMD5 474 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 GNG14A0A1W2PPG7 69 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 PSMD11O00231 422 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 PCDH17O14917 1159 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 KDM1AO60341 852 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 PRAMEF10O60809 474 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 KCNK2O95069 426 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 KRT75O95678 551 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 ADRA2AP08913 450 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 TNFRSF1BP20333 461 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 CCL23P55773 120 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 SNRPGP62308 76 aaKnown RBP7.52□□□□□ -1.21
LRCH3-204ENST00000428136 KRR1Q13601 381 aaKnown RBP7.52□□□□□ -1.21
LRCH3-204ENST00000428136 COLEC12Q5KU26 742 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 TMEM201Q5SNT2 666 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 TMEM215Q68D42 235 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 LILRA3Q8N6C8 439 aaPredicted RBP7.52□□□□□ -1.21
LRCH3-204ENST00000428136 OR4K1Q8NGD4 311 aa7.52□□□□□ -1.21
LRCH3-204ENST00000428136 CDC26Q8NHZ8 85 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms