RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 AZIN2Q96A70 460 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 NTAN1Q96AB6 310 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 CCDC124Q96CT7 223 aaKnown RBP4.86□□□□□ -1.63
LINC00458-202ENST00000427299 OPTNQ96CV9 577 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 CCDC126Q96EE4 140 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 RADILQ96JH8 1075 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 CSPG4P5Q96PW8 444 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 FRG2BQ96QU4 278 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 LBHD1Q9BQE6 289 aaPredicted RBP4.86□□□□□ -1.63
LINC00458-202ENST00000427299 APOL6Q9BWW8 343 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 KRTAP4-4Q9BYR3 166 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 TRIM15Q9C019 465 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 SLC25A18Q9H1K4 315 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 GBA3Q9H227 469 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 MAP6D1Q9H9H5 199 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 TCF7L2Q9NQB0 619 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 C8orf4Q9NR00 106 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 HIF1ANQ9NWT6 349 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 TAS2R10Q9NYW0 307 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.86□□□□□ -1.63
LINC00458-202ENST00000427299 BFARQ9NZS9 450 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 KLHL8Q9P2G9 620 aaPredicted RBP4.86□□□□□ -1.63
LINC00458-202ENST00000427299 STK39Q9UEW8 545 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 HMGXB4Q9UGU5 601 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 CIDEBQ9UHD4 219 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 FBXO4Q9UKT5 387 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 VANGL2Q9ULK5 521 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 TMCO1Q9UM00 188 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 UBQLN1Q9UMX0 589 aaKnown RBP4.86□□□□□ -1.63
LINC00458-202ENST00000427299 OSGIN2Q9Y236 505 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 RAP2CQ9Y3L5 183 aa4.86□□□□□ -1.63
LINC00458-202ENST00000427299 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.86□□□□□ -1.63
LINC00458-202ENST00000427299 MAGEB16A2A368 324 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 AGAP14A8MT82 685 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 H0YJX3 145 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 RHODO00212 210 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 EEF2KO00418 725 aaKnown RBP4.85□□□□□ -1.63
LINC00458-202ENST00000427299 TXNDC9O14530 226 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 TNPO2O14787 897 aaKnown RBP4.85□□□□□ -1.63
LINC00458-202ENST00000427299 PER2O15055 1255 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 HDAC3O15379 428 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 BUD23O43709 281 aaKnown RBP4.85□□□□□ -1.63
LINC00458-202ENST00000427299 GJB3O75712 270 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 CABYRO75952 493 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 AP2A1O95782 977 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 PLGP00747 810 aaPredicted RBP4.85□□□□□ -1.63
LINC00458-202ENST00000427299 UBL4AP11441 157 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 COX4I1P13073 169 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 CPA3P15088 417 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 DPEP1P16444 411 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 NCF2P19878 526 aaPredicted RBP4.85□□□□□ -1.63
LINC00458-202ENST00000427299 ITGAXP20702 1163 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 IL11P20809 199 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 PSMB4P28070 264 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 AXLP30530 894 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 ARL3P36405 182 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 MATKP42679 507 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 RPL34P49207 117 aaKnown RBP4.85□□□□□ -1.63
LINC00458-202ENST00000427299 NUMBP49757 651 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 GMPSP49915 693 aaPredicted RBP4.85□□□□□ -1.63
LINC00458-202ENST00000427299 NUDT2P50583 147 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 CDH15P55291 814 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 TPI1P60174 286 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 OSTNP61366 133 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 CCNA1P78396 465 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 TSPY1Q01534 308 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 CREB5Q02930 508 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 PAFAH1B3Q15102 231 aaKnown RBP4.85□□□□□ -1.63
LINC00458-202ENST00000427299 PSMD5Q16401 504 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 SLC25A52Q3SY17 297 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 KLC3Q6P597 504 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 SLC27A1Q6PCB7 646 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 C17orf99Q6UX52 265 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 ZCCHC23Q6ZST2 131 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 PIWIL4Q7Z3Z4 852 aaKnown RBP4.85□□□□□ -1.63
LINC00458-202ENST00000427299 ARHGAP22Q7Z5H3 698 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 MON1AQ86VX9 555 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 KCNMB4Q86W47 210 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 SPATA24Q86W54 205 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 DEFB107AQ8IZN7 70 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 SIX6OS1Q8N1H7 587 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 TMEM217Q8N7C4 229 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 TDRD5Q8NAT2 981 aaKnown RBP4.85□□□□□ -1.63
LINC00458-202ENST00000427299 COLGALT1Q8NBJ5 622 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 C7orf57Q8NEG2 295 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 TNIP2Q8NFZ5 429 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 PPTC7Q8NI37 304 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 METTL6Q8TCB7 284 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 PDCD6IPQ8WUM4 868 aaKnown RBP4.85□□□□□ -1.63
LINC00458-202ENST00000427299 NAT14Q8WUY8 206 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 HDAC11Q96DB2 347 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 DCUN1D1Q96GG9 259 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 URB1-AS1Q96HZ7 61 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 ILKAPQ9H0C8 392 aaPredicted RBP4.85□□□□□ -1.63
LINC00458-202ENST00000427299 UPF3AQ9H1J1 476 aaKnown RBP4.85□□□□□ -1.63
LINC00458-202ENST00000427299 TTYH1Q9H313 450 aaPredicted RBP4.85□□□□□ -1.63
LINC00458-202ENST00000427299 SNX25Q9H3E2 840 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 EPHX3Q9H6B9 360 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 ZNF696Q9H7X3 374 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 SETD4Q9NVD3 440 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms