RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 GFERP55789 205 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 VSX2P58304 361 aaPredicted RBP14.38□□□□□ -0.11
GINS3-203ENST00000426538 PHC1P78364 1004 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 MC1RQ01726 317 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 CAPRIN1Q14444 709 aaKnown RBP14.38□□□□□ -0.11
GINS3-203ENST00000426538 ANXA8L1Q5VT79 327 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 PGM2L1Q6PCE3 622 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 USP53Q70EK8 1073 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 ABHD13Q7L211 337 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 EFCAB3Q8N7B9 438 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 ACOT4Q8N9L9 421 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 OR2I1PQ8NGU4 316 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 OR8K5Q8NH50 307 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 CCDC74AQ96AQ1 378 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 PPCDCQ96CD2 204 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 TM4SF18Q96CE8 201 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 TEFMQ96QE5 360 aaKnown RBP14.38□□□□□ -0.11
GINS3-203ENST00000426538 GPATCH1Q9BRR8 931 aaKnown RBP14.38□□□□□ -0.11
GINS3-203ENST00000426538 ROGDIQ9GZN7 287 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 FAM60AQ9NP50 221 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 PDE7BQ9NP56 450 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 PRDM7Q9NQW5 492 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 FAM120CQ9NX05 1096 aaKnown RBP14.38□□□□□ -0.11
GINS3-203ENST00000426538 SOHLH2Q9NX45 425 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 SLC7A8Q9UHI5 535 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 ATP6V1HQ9UI12 483 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 L3MBTL1Q9Y468 752 aa14.38□□□□□ -0.11
GINS3-203ENST00000426538 A0A0A6YYD5 115 aa14.37□□□□□ -0.11
GINS3-203ENST00000426538 PRSS51A0A1B0GVH4 220 aa14.37□□□□□ -0.11
GINS3-203ENST00000426538 TXNDC9O14530 226 aa14.37□□□□□ -0.11
GINS3-203ENST00000426538 PCDHGA12O60330 932 aa14.37□□□□□ -0.11
GINS3-203ENST00000426538 SRPX2O60687 465 aaPredicted RBP14.37□□□□□ -0.11
GINS3-203ENST00000426538 ERN1O75460 977 aaKnown RBP14.37□□□□□ -0.11
GINS3-203ENST00000426538 ZBTB11O95625 1053 aaPredicted RBP14.37□□□□□ -0.11
GINS3-203ENST00000426538 ANP32DO95626 131 aa14.37□□□□□ -0.11
GINS3-203ENST00000426538 FURINP09958 794 aa14.37□□□□□ -0.11
GINS3-203ENST00000426538 FAM58BPP0C7Q3 252 aa14.37□□□□□ -0.11
GINS3-203ENST00000426538 LAMP1P11279 417 aa14.37□□□□□ -0.11
GINS3-203ENST00000426538 PIM1P11309 404 aaPredicted RBP14.37□□□□□ -0.11
GINS3-203ENST00000426538 ATP5A1P25705 553 aaKnown RBP14.37□□□□□ -0.11
GINS3-203ENST00000426538 BTN3A2P78410 334 aa14.37□□□□□ -0.11
GINS3-203ENST00000426538 SLAMF1Q13291 335 aa14.37□□□□□ -0.11
GINS3-203ENST00000426538 SAMD4BQ5PRF9 694 aaKnown RBP14.37□□□□□ -0.11
GINS3-203ENST00000426538 ANKRD26P1Q6NSI1 321 aa14.37□□□□□ -0.11
GINS3-203ENST00000426538 C8orf82Q6P1X6 216 aaPredicted RBP14.37□□□□□ -0.11
GINS3-203ENST00000426538 ZNF793Q6ZN11 406 aa14.37□□□□□ -0.11
GINS3-203ENST00000426538 CAMKMTQ7Z624 323 aa14.37□□□□□ -0.11
GINS3-203ENST00000426538 HPS6Q86YV9 775 aa14.37□□□□□ -0.11
GINS3-203ENST00000426538 MCATQ8IVS2 390 aaKnown RBP14.37□□□□□ -0.11
GINS3-203ENST00000426538 CARFQ8N187 725 aa14.37□□□□□ -0.11
GINS3-203ENST00000426538 UTP15Q8TED0 518 aaKnown RBP14.37□□□□□ -0.11
GINS3-203ENST00000426538 N4BP2L2Q92802 583 aaPredicted RBP14.37□□□□□ -0.11
GINS3-203ENST00000426538 COQ8BQ96D53 544 aa14.37□□□□□ -0.11
GINS3-203ENST00000426538 KCNH6Q9H252 994 aa14.37□□□□□ -0.11
GINS3-203ENST00000426538 SMOC1Q9H4F8 434 aa14.37□□□□□ -0.11
GINS3-203ENST00000426538 TMEM181Q9P2C4 612 aa14.37□□□□□ -0.11
GINS3-203ENST00000426538 C15orf38-AP3S2A0A0A6YYH1 394 aa14.36□□□□□ -0.11
GINS3-203ENST00000426538 IGHV5-51A0A0C4DH38 117 aa14.36□□□□□ -0.11
GINS3-203ENST00000426538 PRR33A8MZF0 331 aa14.36□□□□□ -0.11
GINS3-203ENST00000426538 RFXANKO14593 260 aa14.36□□□□□ -0.11
GINS3-203ENST00000426538 P2RX6O15547 441 aa14.36□□□□□ -0.11
GINS3-203ENST00000426538 TMPRSS11DO60235 418 aa14.36□□□□□ -0.11
GINS3-203ENST00000426538 ZNF888P0CJ79 500 aaPredicted RBP14.36□□□□□ -0.11
GINS3-203ENST00000426538 ME2P23368 584 aa14.36□□□□□ -0.11
GINS3-203ENST00000426538 CD1CP29017 333 aa14.36□□□□□ -0.11
GINS3-203ENST00000426538 MLLT3P42568 568 aaPredicted RBP14.36□□□□□ -0.11
GINS3-203ENST00000426538 ARL4DP49703 201 aa14.36□□□□□ -0.11
GINS3-203ENST00000426538 SLC7A2P52569 658 aa14.36□□□□□ -0.11
GINS3-203ENST00000426538 KLC1Q07866 573 aa14.36□□□□□ -0.11
GINS3-203ENST00000426538 LRRC74AQ0VAA2 488 aa14.36□□□□□ -0.11
GINS3-203ENST00000426538 PIGGQ5H8A4 983 aa14.36□□□□□ -0.11
GINS3-203ENST00000426538 C1orf146Q5VVC0 180 aa14.36□□□□□ -0.11
GINS3-203ENST00000426538 WDR74Q6RFH5 385 aaPredicted RBP14.36□□□□□ -0.11
GINS3-203ENST00000426538 DLEU7Q6UYE1 221 aa14.36□□□□□ -0.11
GINS3-203ENST00000426538 NET1Q7Z628 596 aaPredicted RBP14.36□□□□□ -0.11
GINS3-203ENST00000426538 SPRED1Q7Z699 444 aa14.36□□□□□ -0.11
GINS3-203ENST00000426538 ARPINQ7Z6K5 226 aa14.36□□□□□ -0.11
GINS3-203ENST00000426538 ANKRD46Q86W74 232 aa14.36□□□□□ -0.11
GINS3-203ENST00000426538 ZCCHC7Q8N3Z6 543 aaKnown RBP14.36□□□□□ -0.11
GINS3-203ENST00000426538 CSNK1A1LQ8N752 337 aa14.36□□□□□ -0.11
GINS3-203ENST00000426538 RNF148Q8N7C7 305 aa14.36□□□□□ -0.11
GINS3-203ENST00000426538 AMER3Q8N944 861 aa14.36□□□□□ -0.11
GINS3-203ENST00000426538 NAT6Q93015 286 aa14.36□□□□□ -0.11
GINS3-203ENST00000426538 CCDC124Q96CT7 223 aaKnown RBP14.36□□□□□ -0.11
GINS3-203ENST00000426538 PANX1Q96RD7 426 aa14.36□□□□□ -0.11
GINS3-203ENST00000426538 CGREF1Q99674 301 aa14.36□□□□□ -0.11
GINS3-203ENST00000426538 FAIM2Q9BWQ8 316 aa14.36□□□□□ -0.11
GINS3-203ENST00000426538 BHLHE41Q9C0J9 482 aaPredicted RBP14.36□□□□□ -0.11
GINS3-203ENST00000426538 C11orf16Q9NQ32 467 aa14.36□□□□□ -0.11
GINS3-203ENST00000426538 PACSIN3Q9UKS6 424 aa14.36□□□□□ -0.11
GINS3-203ENST00000426538 EXO1Q9UQ84 846 aaKnown RBP14.36□□□□□ -0.11
GINS3-203ENST00000426538 BTBD3Q9Y2F9 522 aa14.36□□□□□ -0.11
GINS3-203ENST00000426538 WDFY4Q6ZS81 3184 aa14.36□□□□□ -0.11
GINS3-203ENST00000426538 ARID1BQ8NFD5 2236 aaPredicted RBP14.36□□□□□ -0.11
GINS3-203ENST00000426538 EME2A4GXA9 379 aaPredicted RBP14.35□□□□□ -0.11
GINS3-203ENST00000426538 FXYD1O00168 92 aa14.35□□□□□ -0.11
GINS3-203ENST00000426538 SH3BP5O60239 455 aa14.35□□□□□ -0.11
GINS3-203ENST00000426538 DRD2P14416 443 aa14.35□□□□□ -0.11
GINS3-203ENST00000426538 DDCP20711 480 aa14.35□□□□□ -0.11
GINS3-203ENST00000426538 SLC6A2P23975 617 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 175.9 ms