RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 PAPD4Q6PIY7 484 aaKnown RBP17.22■□□□□ 0.35
SMARCAL1-205ENST00000425815 QSOX2Q6ZRP7 698 aa17.22■□□□□ 0.35
SMARCAL1-205ENST00000425815 UBE3DQ7Z6J8 389 aa17.22■□□□□ 0.35
SMARCAL1-205ENST00000425815 FAM26EQ8N5C1 309 aa17.22■□□□□ 0.35
SMARCAL1-205ENST00000425815 UHMK1Q8TAS1 419 aaKnown RBP17.22■□□□□ 0.35
SMARCAL1-205ENST00000425815 CCT6BQ92526 530 aa17.22■□□□□ 0.35
SMARCAL1-205ENST00000425815 PTCHD1Q96NR3 888 aa17.22■□□□□ 0.35
SMARCAL1-205ENST00000425815 EFCAB11Q9BUY7 163 aa17.22■□□□□ 0.35
SMARCAL1-205ENST00000425815 REXO4Q9GZR2 422 aaKnown RBP17.22■□□□□ 0.35
SMARCAL1-205ENST00000425815 PRDM7Q9NQW5 492 aa17.22■□□□□ 0.35
SMARCAL1-205ENST00000425815 STMN3Q9NZ72 180 aa17.22■□□□□ 0.35
SMARCAL1-205ENST00000425815 CLDN16Q9Y5I7 305 aa17.22■□□□□ 0.35
SMARCAL1-205ENST00000425815 CCDC189A1A4V9 331 aa17.21■□□□□ 0.35
SMARCAL1-205ENST00000425815 ANKDD1BA6NHY2 528 aa17.21■□□□□ 0.35
SMARCAL1-205ENST00000425815 A8MUI8 341 aa17.21■□□□□ 0.35
SMARCAL1-205ENST00000425815 MAN1A2O60476 641 aa17.21■□□□□ 0.35
SMARCAL1-205ENST00000425815 PRMT3O60678 531 aa17.21■□□□□ 0.35
SMARCAL1-205ENST00000425815 RNH1P13489 461 aaKnown RBP17.21■□□□□ 0.35
SMARCAL1-205ENST00000425815 MAOAP21397 527 aa17.21■□□□□ 0.35
SMARCAL1-205ENST00000425815 JAK1P23458 1154 aa17.21■□□□□ 0.35
SMARCAL1-205ENST00000425815 SERPINB8P50452 374 aa17.21■□□□□ 0.35
SMARCAL1-205ENST00000425815 PLA2G16P53816 162 aa17.21■□□□□ 0.35
SMARCAL1-205ENST00000425815 OR4D2P58180 307 aa17.21■□□□□ 0.35
SMARCAL1-205ENST00000425815 ARG2P78540 354 aa17.21■□□□□ 0.35
SMARCAL1-205ENST00000425815 ACTN3Q08043 901 aaPredicted RBP17.21■□□□□ 0.35
SMARCAL1-205ENST00000425815 LAPTM5Q13571 262 aa17.21■□□□□ 0.35
SMARCAL1-205ENST00000425815 SETDB1Q15047 1291 aa17.21■□□□□ 0.35
SMARCAL1-205ENST00000425815 NR6A1Q15406 480 aa17.21■□□□□ 0.35
SMARCAL1-205ENST00000425815 FCRLBQ6BAA4 426 aa17.21■□□□□ 0.35
SMARCAL1-205ENST00000425815 RPUSD3Q6P087 351 aaKnown RBP17.21■□□□□ 0.35
SMARCAL1-205ENST00000425815 LAS2Q8IYD9 372 aa17.21■□□□□ 0.35
SMARCAL1-205ENST00000425815 CEP112Q8N8E3 955 aa17.21■□□□□ 0.35
SMARCAL1-205ENST00000425815 LRRN4CLQ8ND94 238 aa17.21■□□□□ 0.35
SMARCAL1-205ENST00000425815 TMEM52Q8NDY8 209 aa17.21■□□□□ 0.35
SMARCAL1-205ENST00000425815 OR2L5Q8NG80 312 aa17.21■□□□□ 0.35
SMARCAL1-205ENST00000425815 OR1N1Q8NGS0 311 aa17.21■□□□□ 0.35
SMARCAL1-205ENST00000425815 ZNF473Q8WTR7 871 aaKnown RBP17.21■□□□□ 0.35
SMARCAL1-205ENST00000425815 DCAKDQ8WVC6 231 aa17.21■□□□□ 0.35
SMARCAL1-205ENST00000425815 F2RL3Q96RI0 385 aa17.21■□□□□ 0.35
SMARCAL1-205ENST00000425815 PAFAH2Q99487 392 aa17.21■□□□□ 0.35
SMARCAL1-205ENST00000425815 NPLQ9BXD5 320 aaPredicted RBP17.21■□□□□ 0.35
SMARCAL1-205ENST00000425815 MMP25Q9NPA2 562 aa17.21■□□□□ 0.35
SMARCAL1-205ENST00000425815 NFU1Q9UMS0 254 aa17.21■□□□□ 0.35
SMARCAL1-205ENST00000425815 SHANK1Q9Y566 2161 aa17.21■□□□□ 0.34
SMARCAL1-205ENST00000425815 TCRBV16S1A1N1A0A5B0 115 aa17.2■□□□□ 0.34
SMARCAL1-205ENST00000425815 SYCE1LA8MT33 242 aa17.2■□□□□ 0.34
SMARCAL1-205ENST00000425815 TGFBR3LH3BV60 316 aa17.2■□□□□ 0.34
SMARCAL1-205ENST00000425815 SEMA7AO75326 666 aa17.2■□□□□ 0.34
SMARCAL1-205ENST00000425815 GCAP28676 217 aa17.2■□□□□ 0.34
SMARCAL1-205ENST00000425815 HNRNPFP52597 415 aaKnown RBP17.2■□□□□ 0.34
SMARCAL1-205ENST00000425815 SLC26A5P58743 744 aa17.2■□□□□ 0.34
SMARCAL1-205ENST00000425815 AP2B1P63010 937 aa17.2■□□□□ 0.34
SMARCAL1-205ENST00000425815 EXT1Q16394 746 aa17.2■□□□□ 0.34
SMARCAL1-205ENST00000425815 PFKFB4Q16877 469 aa17.2■□□□□ 0.34
SMARCAL1-205ENST00000425815 TEX9Q8N6V9 391 aa17.2■□□□□ 0.34
SMARCAL1-205ENST00000425815 NFAM1Q8NET5 270 aaPredicted RBP17.2■□□□□ 0.34
SMARCAL1-205ENST00000425815 ELP5Q8TE02 316 aa17.2■□□□□ 0.34
SMARCAL1-205ENST00000425815 GRHL3Q8TE85 626 aa17.2■□□□□ 0.34
SMARCAL1-205ENST00000425815 LPAR4Q99677 370 aa17.2■□□□□ 0.34
SMARCAL1-205ENST00000425815 RNF32Q9H0A6 362 aa17.2■□□□□ 0.34
SMARCAL1-205ENST00000425815 VPS11Q9H270 941 aa17.2■□□□□ 0.34
SMARCAL1-205ENST00000425815 PRDM9Q9NQV7 894 aa17.2■□□□□ 0.34
SMARCAL1-205ENST00000425815 OPTCQ9UBM4 332 aa17.2■□□□□ 0.34
SMARCAL1-205ENST00000425815 DYTNA2CJ06 578 aa17.19■□□□□ 0.34
SMARCAL1-205ENST00000425815 POC1B-GALNT4F8VUJ3 575 aa17.19■□□□□ 0.34
SMARCAL1-205ENST00000425815 CYR61O00622 381 aa17.19■□□□□ 0.34
SMARCAL1-205ENST00000425815 INHBAP08476 426 aa17.19■□□□□ 0.34
SMARCAL1-205ENST00000425815 MSH2P43246 934 aa17.19■□□□□ 0.34
SMARCAL1-205ENST00000425815 ST13P50502 369 aaKnown RBP17.19■□□□□ 0.34
SMARCAL1-205ENST00000425815 NAA30Q147X3 362 aaPredicted RBP17.19■□□□□ 0.34
SMARCAL1-205ENST00000425815 HIST2H2ACQ16777 129 aaPredicted RBP17.19■□□□□ 0.34
SMARCAL1-205ENST00000425815 TECRLQ5HYJ1 363 aa17.19■□□□□ 0.34
SMARCAL1-205ENST00000425815 PAGE2BQ5JRK9 111 aa17.19■□□□□ 0.34
SMARCAL1-205ENST00000425815 HIST2H2AA3Q6FI13 130 aa17.19■□□□□ 0.34
SMARCAL1-205ENST00000425815 ZNF793Q6ZN11 406 aa17.19■□□□□ 0.34
SMARCAL1-205ENST00000425815 SCUBE1Q8IWY4 988 aa17.19■□□□□ 0.34
SMARCAL1-205ENST00000425815 RNF175Q8N4F7 328 aa17.19■□□□□ 0.34
SMARCAL1-205ENST00000425815 OR7G3Q8NG95 312 aa17.19■□□□□ 0.34
SMARCAL1-205ENST00000425815 FAR2Q96K12 515 aa17.19■□□□□ 0.34
SMARCAL1-205ENST00000425815 TAAR6Q96RI8 345 aa17.19■□□□□ 0.34
SMARCAL1-205ENST00000425815 MS4A8Q9BY19 250 aa17.19■□□□□ 0.34
SMARCAL1-205ENST00000425815 KCNK13Q9HB14 408 aa17.19■□□□□ 0.34
SMARCAL1-205ENST00000425815 KCMF1Q9P0J7 381 aa17.19■□□□□ 0.34
SMARCAL1-205ENST00000425815 ZNF180Q9UJW8 692 aa17.19■□□□□ 0.34
SMARCAL1-205ENST00000425815 CYSRT1A8MQ03 144 aa17.18■□□□□ 0.34
SMARCAL1-205ENST00000425815 PSMD12O00232 456 aaPredicted RBP17.18■□□□□ 0.34
SMARCAL1-205ENST00000425815 E2F3O00716 465 aa17.18■□□□□ 0.34
SMARCAL1-205ENST00000425815 SIX3O95343 332 aaPredicted RBP17.18■□□□□ 0.34
SMARCAL1-205ENST00000425815 TGFB1P01137 390 aa17.18■□□□□ 0.34
SMARCAL1-205ENST00000425815 FAM153BP0C7A2 387 aa17.18■□□□□ 0.34
SMARCAL1-205ENST00000425815 EPB42P16452 691 aa17.18■□□□□ 0.34
SMARCAL1-205ENST00000425815 CERS1P27544 350 aa17.18■□□□□ 0.34
SMARCAL1-205ENST00000425815 SERPINB9P50453 376 aa17.18■□□□□ 0.34
SMARCAL1-205ENST00000425815 ALDH18A1P54886 795 aaKnown RBP17.18■□□□□ 0.34
SMARCAL1-205ENST00000425815 LIM2P55344 173 aa17.18■□□□□ 0.34
SMARCAL1-205ENST00000425815 RAB38P57729 211 aa17.18■□□□□ 0.34
SMARCAL1-205ENST00000425815 ZNF33BQ06732 778 aa17.18■□□□□ 0.34
SMARCAL1-205ENST00000425815 PCBP2Q15366 365 aaKnown RBP eCLIP17.18■□□□□ 0.34
SMARCAL1-205ENST00000425815 FAM153CQ494X1 144 aa17.18■□□□□ 0.34
SMARCAL1-205ENST00000425815 ACER2Q5QJU3 275 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms