RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 CHRDQ9H2X0 955 aa25.26■■□□□ 1.63
LDB1-202ENST00000425280 POT1Q9NUX5 634 aa25.26■■□□□ 1.63
LDB1-202ENST00000425280 DCAF13Q9NV06 445 aaKnown RBP25.26■■□□□ 1.63
LDB1-202ENST00000425280 CTSEP14091 401 aa25.25■■□□□ 1.63
LDB1-202ENST00000425280 CKMT2P17540 419 aa25.25■■□□□ 1.63
LDB1-202ENST00000425280 PPIBP23284 216 aaKnown RBP25.25■■□□□ 1.63
LDB1-202ENST00000425280 FOLH1Q04609 750 aa25.25■■□□□ 1.63
LDB1-202ENST00000425280 ATP6AP1Q15904 470 aa25.25■■□□□ 1.63
LDB1-202ENST00000425280 FAM98BQ52LJ0 330 aaKnown RBP25.25■■□□□ 1.63
LDB1-202ENST00000425280 MS4A6EQ96DS6 147 aa25.25■■□□□ 1.63
LDB1-202ENST00000425280 SLC29A1Q99808 456 aa25.25■■□□□ 1.63
LDB1-202ENST00000425280 TBC1D17Q9HA65 648 aa25.25■■□□□ 1.63
LDB1-202ENST00000425280 PRDM6Q9NQX0 595 aa25.25■■□□□ 1.63
LDB1-202ENST00000425280 PCDHGB4Q9UN71 923 aa25.25■■□□□ 1.63
LDB1-202ENST00000425280 A0A0A6YYD5 115 aa25.25■■□□□ 1.63
LDB1-202ENST00000425280 C4orf51C9J302 202 aa25.25■■□□□ 1.63
LDB1-202ENST00000425280 TBX19O60806 448 aa25.25■■□□□ 1.63
LDB1-202ENST00000425280 RAP2AP10114 183 aa25.25■■□□□ 1.63
LDB1-202ENST00000425280 CD27P26842 260 aa25.25■■□□□ 1.63
LDB1-202ENST00000425280 SSR2P43308 183 aa25.25■■□□□ 1.63
LDB1-202ENST00000425280 CCT8P50990 548 aa25.25■■□□□ 1.63
LDB1-202ENST00000425280 C1orf61Q13536 156 aa25.25■■□□□ 1.63
LDB1-202ENST00000425280 ZNF793Q6ZN11 406 aa25.25■■□□□ 1.63
LDB1-202ENST00000425280 TRIM73Q86UV7 250 aa25.25■■□□□ 1.63
LDB1-202ENST00000425280 PTOV1Q86YD1 416 aa25.25■■□□□ 1.63
LDB1-202ENST00000425280 UGT2B28Q9BY64 529 aa25.25■■□□□ 1.63
LDB1-202ENST00000425280 ABCG4Q9H172 646 aa25.25■■□□□ 1.63
LDB1-202ENST00000425280 MDC1Q14676 2089 aaKnown RBP25.24■■□□□ 1.63
LDB1-202ENST00000425280 KIR2DS5A0A0G2JLQ3 304 aa25.24■■□□□ 1.63
LDB1-202ENST00000425280 A0A0G2JNG1 304 aa25.24■■□□□ 1.63
LDB1-202ENST00000425280 OR6C74A6NCV1 312 aa25.24■■□□□ 1.63
LDB1-202ENST00000425280 SAC3D1A6NKF1 404 aa25.24■■□□□ 1.63
LDB1-202ENST00000425280 KIR2DS3K7RE56 304 aa25.24■■□□□ 1.63
LDB1-202ENST00000425280 WNT1P04628 370 aa25.24■■□□□ 1.63
LDB1-202ENST00000425280 UGT2B7P16662 529 aa25.24■■□□□ 1.63
LDB1-202ENST00000425280 POLR2CP19387 275 aaPredicted RBP25.24■■□□□ 1.63
LDB1-202ENST00000425280 GSTM5P46439 218 aa25.24■■□□□ 1.63
LDB1-202ENST00000425280 KIR2DS5Q14953 304 aa25.24■■□□□ 1.63
LDB1-202ENST00000425280 HEPACAMQ14CZ8 416 aa25.24■■□□□ 1.63
LDB1-202ENST00000425280 ADRM1Q16186 407 aa25.24■■□□□ 1.63
LDB1-202ENST00000425280 NKG7Q16617 165 aa25.24■■□□□ 1.63
LDB1-202ENST00000425280 NRF1Q16656 503 aa25.24■■□□□ 1.63
LDB1-202ENST00000425280 VMACQ2NL98 169 aa25.24■■□□□ 1.63
LDB1-202ENST00000425280 NAGSQ8N159 534 aa25.24■■□□□ 1.63
LDB1-202ENST00000425280 SPEM1Q8N4L4 309 aa25.24■■□□□ 1.63
LDB1-202ENST00000425280 SLC37A2Q8TED4 501 aa25.24■■□□□ 1.63
LDB1-202ENST00000425280 DPH2Q9BQC3 489 aaPredicted RBP25.24■■□□□ 1.63
LDB1-202ENST00000425280 CHST8Q9H2A9 424 aa25.24■■□□□ 1.63
LDB1-202ENST00000425280 CORO2BQ9UQ03 480 aa25.24■■□□□ 1.63
LDB1-202ENST00000425280 A0A1W2PRB8 838 aa25.24■■□□□ 1.63
LDB1-202ENST00000425280 OR5K4A6NMS3 321 aa25.24■■□□□ 1.63
LDB1-202ENST00000425280 ZW10O43264 779 aa25.24■■□□□ 1.63
LDB1-202ENST00000425280 BLKP51451 505 aa25.24■■□□□ 1.63
LDB1-202ENST00000425280 CHRNB3Q05901 458 aa25.24■■□□□ 1.63
LDB1-202ENST00000425280 ERICH5Q6P6B1 374 aa25.24■■□□□ 1.63
LDB1-202ENST00000425280 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.24■■□□□ 1.63
LDB1-202ENST00000425280 GJD3Q8N144 294 aa25.24■■□□□ 1.63
LDB1-202ENST00000425280 DEFB123Q8N688 67 aa25.24■■□□□ 1.63
LDB1-202ENST00000425280 OR10G6Q8NH81 332 aa25.24■■□□□ 1.63
LDB1-202ENST00000425280 TRIM4Q9C037 500 aa25.24■■□□□ 1.63
LDB1-202ENST00000425280 H0YJX3 145 aa25.23■■□□□ 1.63
LDB1-202ENST00000425280 SERPINA1P01009 418 aa25.23■■□□□ 1.63
LDB1-202ENST00000425280 NTRK1P04629 796 aa25.23■■□□□ 1.63
LDB1-202ENST00000425280 ALDH9A1P49189 494 aa25.23■■□□□ 1.63
LDB1-202ENST00000425280 RGNQ15493 299 aa25.23■■□□□ 1.63
LDB1-202ENST00000425280 TOR1AIP1Q5JTV8 583 aa25.23■■□□□ 1.63
LDB1-202ENST00000425280 ZBTB49Q6ZSB9 765 aa25.23■■□□□ 1.63
LDB1-202ENST00000425280 DCP2Q8IU60 420 aaKnown RBP25.23■■□□□ 1.63
LDB1-202ENST00000425280 EPHX4Q8IUS5 362 aa25.23■■□□□ 1.63
LDB1-202ENST00000425280 OLAHQ9NV23 265 aa25.23■■□□□ 1.63
LDB1-202ENST00000425280 TEX10Q9NXF1 929 aaPredicted RBP25.23■■□□□ 1.63
LDB1-202ENST00000425280 TAS2R9Q9NYW1 312 aa25.23■■□□□ 1.63
LDB1-202ENST00000425280 ACTR10Q9NZ32 417 aa25.23■■□□□ 1.63
LDB1-202ENST00000425280 APOBEC3BQ9UH17 382 aaKnown RBP25.23■■□□□ 1.63
LDB1-202ENST00000425280 MAP3K13O43283 966 aa25.22■■□□□ 1.63
LDB1-202ENST00000425280 ERI3O43414 337 aaKnown RBP25.22■■□□□ 1.63
LDB1-202ENST00000425280 PRKD3O94806 890 aa25.22■■□□□ 1.63
LDB1-202ENST00000425280 JUNDP17535 347 aa25.22■■□□□ 1.63
LDB1-202ENST00000425280 TRA2BP62995 288 aaKnown RBP25.22■■□□□ 1.63
LDB1-202ENST00000425280 C16orf72Q14CZ0 275 aa25.22■■□□□ 1.63
LDB1-202ENST00000425280 TJAP1Q5JTD0 557 aa25.22■■□□□ 1.63
LDB1-202ENST00000425280 DDX59Q5T1V6 619 aaKnown RBP eCLIP25.22■■□□□ 1.63
LDB1-202ENST00000425280 FAM180BQ6P0A1 224 aa25.22■■□□□ 1.63
LDB1-202ENST00000425280 ABHD17CQ6PCB6 329 aa25.22■■□□□ 1.63
LDB1-202ENST00000425280 MFSD2AQ8NA29 543 aa25.22■■□□□ 1.63
LDB1-202ENST00000425280 CADM4Q8NFZ8 388 aa25.22■■□□□ 1.63
LDB1-202ENST00000425280 SLC35A5Q9BS91 424 aa25.22■■□□□ 1.63
LDB1-202ENST00000425280 LRRC61Q9BV99 259 aa25.22■■□□□ 1.63
LDB1-202ENST00000425280 RAB26Q9ULW5 256 aa25.22■■□□□ 1.63
LDB1-202ENST00000425280 PCDHGA2Q9Y5H1 932 aa25.22■■□□□ 1.63
LDB1-202ENST00000425280 A0A1W2PR77 199 aa25.22■■□□□ 1.63
LDB1-202ENST00000425280 GSAPA4D1B5 854 aa25.22■■□□□ 1.63
LDB1-202ENST00000425280 EIF4E1BA6NMX2 242 aaKnown RBP25.22■■□□□ 1.63
LDB1-202ENST00000425280 SOCS2O14508 198 aa25.22■■□□□ 1.63
LDB1-202ENST00000425280 TXNDC9O14530 226 aa25.22■■□□□ 1.63
LDB1-202ENST00000425280 LDLRP01130 860 aa25.22■■□□□ 1.63
LDB1-202ENST00000425280 HSPA13P48723 471 aa25.22■■□□□ 1.63
LDB1-202ENST00000425280 RPS15AP62244 130 aaKnown RBP25.22■■□□□ 1.63
LDB1-202ENST00000425280 MED21Q13503 144 aa25.22■■□□□ 1.63
LDB1-202ENST00000425280 PPP4R4Q6NUP7 873 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms