RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 ACSL6Q9UKU0 697 aa10.24□□□□□ -0.77
CUX1-205ENST00000425244 SH2B3Q9UQQ2 575 aa10.24□□□□□ -0.77
CUX1-205ENST00000425244 NUMA1Q14980 2115 aa10.23□□□□□ -0.77
CUX1-205ENST00000425244 K7EQS6 105 aa10.23□□□□□ -0.77
CUX1-205ENST00000425244 EGFP01133 1207 aa10.23□□□□□ -0.77
CUX1-205ENST00000425244 TGFB1P01137 390 aa10.23□□□□□ -0.77
CUX1-205ENST00000425244 PRNPP04156 253 aa10.23□□□□□ -0.77
CUX1-205ENST00000425244 RRM2P31350 389 aa10.23□□□□□ -0.77
CUX1-205ENST00000425244 ASMTP46597 345 aa10.23□□□□□ -0.77
CUX1-205ENST00000425244 TBPL1P62380 186 aa10.23□□□□□ -0.77
CUX1-205ENST00000425244 RGNQ15493 299 aa10.23□□□□□ -0.77
CUX1-205ENST00000425244 CTF1Q16619 201 aa10.23□□□□□ -0.77
CUX1-205ENST00000425244 CYP27C1Q4G0S4 372 aa10.23□□□□□ -0.77
CUX1-205ENST00000425244 KIAA1614Q5VZ46 1190 aa10.23□□□□□ -0.77
CUX1-205ENST00000425244 ERAP2Q6P179 960 aa10.23□□□□□ -0.77
CUX1-205ENST00000425244 ZNF852Q6ZMS4 543 aa10.23□□□□□ -0.77
CUX1-205ENST00000425244 AHSA2Q719I0 299 aa10.23□□□□□ -0.77
CUX1-205ENST00000425244 SLCO6A1Q86UG4 719 aa10.23□□□□□ -0.77
CUX1-205ENST00000425244 SYNPOQ8N3V7 929 aa10.23□□□□□ -0.77
CUX1-205ENST00000425244 C2orf73Q8N5S3 287 aaPredicted RBP10.23□□□□□ -0.77
CUX1-205ENST00000425244 KIAA1958Q8N8K9 716 aa10.23□□□□□ -0.77
CUX1-205ENST00000425244 NDNFQ8TB73 568 aa10.23□□□□□ -0.77
CUX1-205ENST00000425244 STARD8Q92502 1023 aa10.23□□□□□ -0.77
CUX1-205ENST00000425244 FAM129BQ96TA1 746 aa10.23□□□□□ -0.77
CUX1-205ENST00000425244 OR2AG1Q9H205 316 aa10.23□□□□□ -0.77
CUX1-205ENST00000425244 PRSS16Q9NQE7 514 aa10.23□□□□□ -0.77
CUX1-205ENST00000425244 FAIMQ9NVQ4 179 aa10.23□□□□□ -0.77
CUX1-205ENST00000425244 DOLKQ9UPQ8 538 aa10.23□□□□□ -0.77
CUX1-205ENST00000425244 PCDHGA10Q9Y5H3 936 aa10.23□□□□□ -0.77
CUX1-205ENST00000425244 SERTM1A2A2V5 107 aa10.23□□□□□ -0.77
CUX1-205ENST00000425244 M0R3G1 203 aa10.23□□□□□ -0.77
CUX1-205ENST00000425244 OCM2P0CE71 109 aa10.23□□□□□ -0.77
CUX1-205ENST00000425244 OCMP0CE72 109 aaPredicted RBP10.23□□□□□ -0.77
CUX1-205ENST00000425244 ETFAP13804 333 aa10.23□□□□□ -0.77
CUX1-205ENST00000425244 IDSP22304 550 aa10.23□□□□□ -0.77
CUX1-205ENST00000425244 TIA1P31483 386 aaKnown RBP eCLIP10.23□□□□□ -0.771e-6■■■■□ 21
CUX1-205ENST00000425244 KRT20P35900 424 aa10.23□□□□□ -0.77
CUX1-205ENST00000425244 PRLHRP49683 370 aa10.23□□□□□ -0.77
CUX1-205ENST00000425244 CRYBA2P53672 197 aa10.23□□□□□ -0.77
CUX1-205ENST00000425244 ITGA1P56199 1179 aa10.23□□□□□ -0.77
CUX1-205ENST00000425244 VBP1P61758 197 aa10.23□□□□□ -0.77
CUX1-205ENST00000425244 RPP38P78345 283 aaKnown RBP10.23□□□□□ -0.77
CUX1-205ENST00000425244 MC1RQ01726 317 aa10.23□□□□□ -0.77
CUX1-205ENST00000425244 OCA2Q04671 838 aa10.23□□□□□ -0.77
CUX1-205ENST00000425244 KEAP1Q14145 624 aa10.23□□□□□ -0.77
CUX1-205ENST00000425244 SLBPQ14493 270 aaKnown RBP eCLIP10.23□□□□□ -0.77
CUX1-205ENST00000425244 ZNF385BQ569K4 471 aa10.23□□□□□ -0.77
CUX1-205ENST00000425244 COX20Q5RI15 118 aa10.23□□□□□ -0.77
CUX1-205ENST00000425244 MED27Q6P2C8 311 aa10.23□□□□□ -0.77
CUX1-205ENST00000425244 CACTIN-AS1Q8N1I8 211 aa10.23□□□□□ -0.77
CUX1-205ENST00000425244 DEFB123Q8N688 67 aa10.23□□□□□ -0.77
CUX1-205ENST00000425244 OR5AK3PQ8NH89 298 aa10.23□□□□□ -0.77
CUX1-205ENST00000425244 GANCQ8TET4 914 aa10.23□□□□□ -0.77
CUX1-205ENST00000425244 CIDECQ96AQ7 238 aaPredicted RBP10.23□□□□□ -0.77
CUX1-205ENST00000425244 ARRDC3Q96B67 414 aa10.23□□□□□ -0.77
CUX1-205ENST00000425244 KCNC2Q96PR1 638 aa10.23□□□□□ -0.77
CUX1-205ENST00000425244 TMEM121BQ9BXQ6 578 aaPredicted RBP10.23□□□□□ -0.77
CUX1-205ENST00000425244 OR51B5Q9H339 312 aa10.23□□□□□ -0.77
CUX1-205ENST00000425244 THAP10Q9P2Z0 257 aaPredicted RBP10.23□□□□□ -0.77
CUX1-205ENST00000425244 SPASTQ9UBP0 616 aa10.23□□□□□ -0.77
CUX1-205ENST00000425244 NAALAD2Q9Y3Q0 740 aa10.23□□□□□ -0.77
CUX1-205ENST00000425244 DENND4AQ7Z401 1863 aa10.23□□□□□ -0.77
CUX1-205ENST00000425244 SLC5A10A0PJK1 596 aa10.22□□□□□ -0.77
CUX1-205ENST00000425244 ANHXE9PGG2 379 aa10.22□□□□□ -0.77
CUX1-205ENST00000425244 K7ESM1 405 aa10.22□□□□□ -0.77
CUX1-205ENST00000425244 QSOX1O00391 747 aa10.22□□□□□ -0.77
CUX1-205ENST00000425244 RGS10O43665 173 aa10.22□□□□□ -0.77
CUX1-205ENST00000425244 JRKO75564 520 aa10.22□□□□□ -0.77
CUX1-205ENST00000425244 C6orf47O95873 294 aa10.22□□□□□ -0.77
CUX1-205ENST00000425244 C9P02748 559 aa10.22□□□□□ -0.77
CUX1-205ENST00000425244 SEMG1P04279 462 aa10.22□□□□□ -0.77
CUX1-205ENST00000425244 OR1E2P47887 323 aa10.22□□□□□ -0.77
CUX1-205ENST00000425244 MASP1P48740 699 aa10.22□□□□□ -0.77
CUX1-205ENST00000425244 SLC35A2P78381 396 aa10.22□□□□□ -0.77
CUX1-205ENST00000425244 CAMK2GQ13555 558 aaPredicted RBP10.22□□□□□ -0.77
CUX1-205ENST00000425244 MAD2L1BPQ15013 274 aaPredicted RBP10.22□□□□□ -0.77
CUX1-205ENST00000425244 SPIN4Q56A73 249 aa10.22□□□□□ -0.77
CUX1-205ENST00000425244 ZNF362Q5T0B9 420 aaPredicted RBP10.22□□□□□ -0.77
CUX1-205ENST00000425244 ANXA8L1Q5VT79 327 aa10.22□□□□□ -0.77
CUX1-205ENST00000425244 KIAA1211LQ6NV74 962 aa10.22□□□□□ -0.77
CUX1-205ENST00000425244 LIPIQ6XZB0 460 aa10.22□□□□□ -0.77
CUX1-205ENST00000425244 SLCO4C1Q6ZQN7 724 aa10.22□□□□□ -0.77
CUX1-205ENST00000425244 DPPA4Q7L190 304 aa10.22□□□□□ -0.77
CUX1-205ENST00000425244 TRMT11Q7Z4G4 463 aaKnown RBP10.22□□□□□ -0.77
CUX1-205ENST00000425244 TECPR1Q7Z6L1 1165 aa10.22□□□□□ -0.77
CUX1-205ENST00000425244 ANKRD13BQ86YJ7 626 aa10.22□□□□□ -0.77
CUX1-205ENST00000425244 CCDC71Q8IV32 467 aaPredicted RBP10.22□□□□□ -0.77
CUX1-205ENST00000425244 CENPSQ8N2Z9 138 aa10.22□□□□□ -0.77
CUX1-205ENST00000425244 C11orf65Q8NCR3 313 aa10.22□□□□□ -0.77
CUX1-205ENST00000425244 FLCNQ8NFG4 579 aa10.22□□□□□ -0.77
CUX1-205ENST00000425244 OR56A3Q8NH54 315 aa10.22□□□□□ -0.77
CUX1-205ENST00000425244 ZFP90Q8TF47 636 aa10.22□□□□□ -0.77
CUX1-205ENST00000425244 FBLIM1Q8WUP2 373 aa10.22□□□□□ -0.77
CUX1-205ENST00000425244 ZNF480Q8WV37 535 aa10.22□□□□□ -0.77
CUX1-205ENST00000425244 HLA-CQ95604 372 aa10.22□□□□□ -0.77
CUX1-205ENST00000425244 BRF2Q9HAW0 419 aa10.22□□□□□ -0.77
CUX1-205ENST00000425244 AMBNQ9NP70 447 aa10.22□□□□□ -0.77
CUX1-205ENST00000425244 NDRG2Q9UN36 371 aaKnown RBP10.22□□□□□ -0.77
CUX1-205ENST00000425244 TMEM265A0A087WTH1 108 aa10.22□□□□□ -0.77
CUX1-205ENST00000425244 CXorf51AA0A1B0GTR3 108 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms