RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 IGHV4-30-2A0A087WSY4 118 aa5.8□□□□□ -1.48
SDCBP-203ENST00000424270 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.8□□□□□ -1.48
SDCBP-203ENST00000424270 A0A1W2PP18 115 aa5.8□□□□□ -1.48
SDCBP-203ENST00000424270 KRT87PA6NCN2 255 aa5.8□□□□□ -1.48
SDCBP-203ENST00000424270 MBD3L3A6NE82 208 aaPredicted RBP5.8□□□□□ -1.48
SDCBP-203ENST00000424270 CD8B2A6NJW9 211 aa5.8□□□□□ -1.48
SDCBP-203ENST00000424270 H0Y3Z8 333 aa5.8□□□□□ -1.48
SDCBP-203ENST00000424270 MYO1FO00160 1098 aa5.8□□□□□ -1.48
SDCBP-203ENST00000424270 HAT1O14929 419 aa5.8□□□□□ -1.48
SDCBP-203ENST00000424270 CLOCKO15516 846 aa5.8□□□□□ -1.48
SDCBP-203ENST00000424270 MYBL1P10243 752 aa5.8□□□□□ -1.48
SDCBP-203ENST00000424270 FERP16591 822 aa5.8□□□□□ -1.48
SDCBP-203ENST00000424270 CYLC1P35663 651 aaPredicted RBP5.8□□□□□ -1.48
SDCBP-203ENST00000424270 SKP1P63208 163 aa5.8□□□□□ -1.48
SDCBP-203ENST00000424270 OLR1P78380 273 aa5.8□□□□□ -1.48
SDCBP-203ENST00000424270 VLDLRP98155 873 aa5.8□□□□□ -1.48
SDCBP-203ENST00000424270 TYRO3Q06418 890 aa5.8□□□□□ -1.48
SDCBP-203ENST00000424270 GRB7Q14451 532 aa5.8□□□□□ -1.48
SDCBP-203ENST00000424270 DBN1Q16643 649 aa5.8□□□□□ -1.48
SDCBP-203ENST00000424270 P3H1Q32P28 736 aa5.8□□□□□ -1.48
SDCBP-203ENST00000424270 BEX5Q5H9J7 111 aa5.8□□□□□ -1.48
SDCBP-203ENST00000424270 PRAMEF20Q5VT98 475 aa5.8□□□□□ -1.48
SDCBP-203ENST00000424270 ANKRD34AQ69YU3 496 aa5.8□□□□□ -1.48
SDCBP-203ENST00000424270 TREML4Q6UXN2 200 aa5.8□□□□□ -1.48
SDCBP-203ENST00000424270 SYDE1Q6ZW31 735 aaPredicted RBP5.8□□□□□ -1.48
SDCBP-203ENST00000424270 RFX6Q8HWS3 928 aa5.8□□□□□ -1.48
SDCBP-203ENST00000424270 VRK3Q8IV63 474 aa5.8□□□□□ -1.48
SDCBP-203ENST00000424270 HSCBQ8IWL3 235 aa5.8□□□□□ -1.48
SDCBP-203ENST00000424270 DEPDC4Q8N2C3 294 aa5.8□□□□□ -1.48
SDCBP-203ENST00000424270 PQLC3Q8N755 202 aa5.8□□□□□ -1.48
SDCBP-203ENST00000424270 CNEP1R1Q8N9A8 125 aa5.8□□□□□ -1.48
SDCBP-203ENST00000424270 C9orf106Q8NAJ2 232 aa5.8□□□□□ -1.48
SDCBP-203ENST00000424270 OR5T3Q8NGG3 340 aa5.8□□□□□ -1.48
SDCBP-203ENST00000424270 MBD3L2Q8NHZ7 208 aaPredicted RBP5.8□□□□□ -1.48
SDCBP-203ENST00000424270 GABPB2Q8TAK5 448 aaPredicted RBP5.8□□□□□ -1.48
SDCBP-203ENST00000424270 NCLNQ969V3 563 aa5.8□□□□□ -1.48
SDCBP-203ENST00000424270 NTNG2Q96CW9 530 aa5.8□□□□□ -1.48
SDCBP-203ENST00000424270 SCYL1Q96KG9 808 aa5.8□□□□□ -1.48
SDCBP-203ENST00000424270 OR2A5Q96R48 311 aa5.8□□□□□ -1.48
SDCBP-203ENST00000424270 TIMP4Q99727 224 aa5.8□□□□□ -1.48
SDCBP-203ENST00000424270 TM9SF2Q99805 663 aa5.8□□□□□ -1.48
SDCBP-203ENST00000424270 EBNA1BP2Q99848 306 aaKnown RBP5.8□□□□□ -1.48
SDCBP-203ENST00000424270 AARSD1Q9BTE6 412 aaKnown RBP5.8□□□□□ -1.48
SDCBP-203ENST00000424270 KLHL4Q9C0H6 718 aa5.8□□□□□ -1.48
SDCBP-203ENST00000424270 ZNF703Q9H7S9 590 aaPredicted RBP5.8□□□□□ -1.48
SDCBP-203ENST00000424270 EML4Q9HC35 981 aaKnown RBP5.8□□□□□ -1.48
SDCBP-203ENST00000424270 SEMA4BQ9NPR2 832 aaPredicted RBP5.8□□□□□ -1.48
SDCBP-203ENST00000424270 AIPL1Q9NZN9 384 aa5.8□□□□□ -1.48
SDCBP-203ENST00000424270 KLK4Q9Y5K2 254 aa5.8□□□□□ -1.48
SDCBP-203ENST00000424270 MGAM2Q2M2H8 2515 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 AGAP14A8MT82 685 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 A8MXE2 369 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 C16orf97H3BN30 126 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 LINC01387J3KSC0 135 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 EPHB6O15197 1021 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 IGHV4-39P01824 125 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 SERPIND1P05546 499 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 RFPL3SP0C7P2 107 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 SLC35G6P0C7Q6 338 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 CCDC166P0CW27 439 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 CCL3P10147 92 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 CD79BP40259 229 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 CCNFP41002 786 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 RPL21P46778 160 aaKnown RBP5.79□□□□□ -1.48
SDCBP-203ENST00000424270 GZMKP49863 264 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 GEMP55040 296 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 EEF1A1P68104 462 aaKnown RBP5.79□□□□□ -1.48
SDCBP-203ENST00000424270 BTG2P78543 158 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 SRYQ05066 204 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 PRPSAP1Q14558 356 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 CCSMST1Q4G0I0 132 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 MSS51Q4VC12 460 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 XKR6Q5GH73 641 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 EEF1A1P5Q5VTE0 462 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 ICE2Q659A1 982 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 VASNQ6EMK4 673 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 OPN5Q6U736 354 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 PLXDC2Q6UX71 529 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 NPNTQ6UXI9 565 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 LIAT1Q6ZQX7 453 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 P4HA3Q7Z4N8 544 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 PCGF5Q86SE9 256 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 WFDC8Q8IUA0 241 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 GOLM1Q8NBJ4 401 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 CAMKVQ8NCB2 501 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 FAM13CQ8NE31 585 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 TFB1MQ8WVM0 346 aaKnown RBP5.79□□□□□ -1.48
SDCBP-203ENST00000424270 SMPDL3AQ92484 453 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 ANKRD9Q96BM1 317 aaPredicted RBP5.79□□□□□ -1.48
SDCBP-203ENST00000424270 C3orf49Q96BT1 292 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 THAP11Q96EK4 314 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 PLPPR2Q96GM1 343 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 OXNAD1Q96HP4 312 aaPredicted RBP5.79□□□□□ -1.48
SDCBP-203ENST00000424270 DNAJC1Q96KC8 554 aaKnown RBP5.79□□□□□ -1.48
SDCBP-203ENST00000424270 SGCZQ96LD1 299 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 RASL10BQ96S79 203 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 NTMT1Q9BV86 223 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 MANSC1Q9H8J5 431 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 CALHM2Q9HA72 323 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 ZFP64Q9NPA5 681 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms