RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 UBE3DQ7Z6J8 389 aa16.76■□□□□ 0.27
SBDSP1-202ENST00000423945 ATCAYQ86WG3 371 aa16.76■□□□□ 0.27
SBDSP1-202ENST00000423945 TRIM44Q96DX7 344 aaPredicted RBP16.76■□□□□ 0.27
SBDSP1-202ENST00000423945 NPAS2Q99743 824 aa16.76■□□□□ 0.27
SBDSP1-202ENST00000423945 VPS11Q9H270 941 aa16.76■□□□□ 0.27
SBDSP1-202ENST00000423945 NECTIN3Q9NQS3 549 aa16.76■□□□□ 0.27
SBDSP1-202ENST00000423945 OPTCQ9UBM4 332 aa16.76■□□□□ 0.27
SBDSP1-202ENST00000423945 CLDN16Q9Y5I7 305 aa16.76■□□□□ 0.27
SBDSP1-202ENST00000423945 CCDC189A1A4V9 331 aa16.75■□□□□ 0.27
SBDSP1-202ENST00000423945 ANKDD1BA6NHY2 528 aa16.75■□□□□ 0.27
SBDSP1-202ENST00000423945 TCP11X1B4DZS4 312 aa16.75■□□□□ 0.27
SBDSP1-202ENST00000423945 POC1B-GALNT4F8VUJ3 575 aa16.75■□□□□ 0.27
SBDSP1-202ENST00000423945 VPS4BO75351 444 aa16.75■□□□□ 0.27
SBDSP1-202ENST00000423945 INHBAP08476 426 aa16.75■□□□□ 0.27
SBDSP1-202ENST00000423945 FAM153BP0C7A2 387 aa16.75■□□□□ 0.27
SBDSP1-202ENST00000423945 RHOXF2BP0C7M4 288 aa16.75■□□□□ 0.27
SBDSP1-202ENST00000423945 RNH1P13489 461 aaKnown RBP16.75■□□□□ 0.27
SBDSP1-202ENST00000423945 ICAM2P13598 275 aa16.75■□□□□ 0.27
SBDSP1-202ENST00000423945 MAOAP21397 527 aa16.75■□□□□ 0.27
SBDSP1-202ENST00000423945 TSFMP43897 325 aaKnown RBP16.75■□□□□ 0.27
SBDSP1-202ENST00000423945 HNRNPFP52597 415 aaKnown RBP16.75■□□□□ 0.27
SBDSP1-202ENST00000423945 PLA2G16P53816 162 aa16.75■□□□□ 0.27
SBDSP1-202ENST00000423945 NAA30Q147X3 362 aaPredicted RBP16.75■□□□□ 0.27
SBDSP1-202ENST00000423945 ZNF169Q14929 603 aaPredicted RBP16.75■□□□□ 0.27
SBDSP1-202ENST00000423945 BTBD16Q32M84 506 aa16.75■□□□□ 0.27
SBDSP1-202ENST00000423945 FAM153CQ494X1 144 aa16.75■□□□□ 0.27
SBDSP1-202ENST00000423945 H3F3CQ6NXT2 135 aa16.75■□□□□ 0.27
SBDSP1-202ENST00000423945 ABHD17CQ6PCB6 329 aa16.75■□□□□ 0.27
SBDSP1-202ENST00000423945 QSOX2Q6ZRP7 698 aa16.75■□□□□ 0.27
SBDSP1-202ENST00000423945 LAS2Q8IYD9 372 aa16.75■□□□□ 0.27
SBDSP1-202ENST00000423945 TMEM52Q8NDY8 209 aa16.75■□□□□ 0.27
SBDSP1-202ENST00000423945 OR2L5Q8NG80 312 aa16.75■□□□□ 0.27
SBDSP1-202ENST00000423945 ZNF473Q8WTR7 871 aaKnown RBP16.75■□□□□ 0.27
SBDSP1-202ENST00000423945 CNDP1Q96KN2 507 aa16.75■□□□□ 0.27
SBDSP1-202ENST00000423945 PTCHD1Q96NR3 888 aa16.75■□□□□ 0.27
SBDSP1-202ENST00000423945 F2RL3Q96RI0 385 aa16.75■□□□□ 0.27
SBDSP1-202ENST00000423945 RHOXF2Q9BQY4 288 aa16.75■□□□□ 0.27
SBDSP1-202ENST00000423945 MS4A8Q9BY19 250 aa16.75■□□□□ 0.27
SBDSP1-202ENST00000423945 TXLNGYQ9BZA5 131 aa16.75■□□□□ 0.27
SBDSP1-202ENST00000423945 REXO4Q9GZR2 422 aaKnown RBP16.75■□□□□ 0.27
SBDSP1-202ENST00000423945 ZNF180Q9UJW8 692 aa16.75■□□□□ 0.27
SBDSP1-202ENST00000423945 VPS4AQ9UN37 437 aa16.75■□□□□ 0.27
SBDSP1-202ENST00000423945 HIVEP3Q5T1R4 2406 aa16.74■□□□□ 0.27
SBDSP1-202ENST00000423945 A0A087WUV0 522 aaPredicted RBP16.74■□□□□ 0.27
SBDSP1-202ENST00000423945 SYCE1LA8MT33 242 aa16.74■□□□□ 0.27
SBDSP1-202ENST00000423945 TGFBR3LH3BV60 316 aa16.74■□□□□ 0.27
SBDSP1-202ENST00000423945 SIX3O95343 332 aaPredicted RBP16.74■□□□□ 0.27
SBDSP1-202ENST00000423945 WDPCPO95876 746 aa16.74■□□□□ 0.27
SBDSP1-202ENST00000423945 F10P00742 488 aa16.74■□□□□ 0.27
SBDSP1-202ENST00000423945 JAK1P23458 1154 aa16.74■□□□□ 0.27
SBDSP1-202ENST00000423945 MSH2P43246 934 aa16.74■□□□□ 0.27
SBDSP1-202ENST00000423945 SERPINB9P50453 376 aa16.74■□□□□ 0.27
SBDSP1-202ENST00000423945 ALDH18A1P54886 795 aaKnown RBP16.74■□□□□ 0.27
SBDSP1-202ENST00000423945 OR4D2P58180 307 aa16.74■□□□□ 0.27
SBDSP1-202ENST00000423945 MRPL49Q13405 166 aaKnown RBP16.74■□□□□ 0.27
SBDSP1-202ENST00000423945 LAPTM5Q13571 262 aa16.74■□□□□ 0.27
SBDSP1-202ENST00000423945 PCBP2Q15366 365 aaKnown RBP eCLIP16.74■□□□□ 0.27
SBDSP1-202ENST00000423945 PFKFB4Q16877 469 aa16.74■□□□□ 0.27
SBDSP1-202ENST00000423945 FCRLBQ6BAA4 426 aa16.74■□□□□ 0.27
SBDSP1-202ENST00000423945 ZNF793Q6ZN11 406 aa16.74■□□□□ 0.27
SBDSP1-202ENST00000423945 IFT20Q8IY31 132 aa16.74■□□□□ 0.27
SBDSP1-202ENST00000423945 RNF175Q8N4F7 328 aa16.74■□□□□ 0.27
SBDSP1-202ENST00000423945 TEX9Q8N6V9 391 aa16.74■□□□□ 0.27
SBDSP1-202ENST00000423945 M1APQ8TC57 530 aa16.74■□□□□ 0.27
SBDSP1-202ENST00000423945 HAS2Q92819 552 aa16.74■□□□□ 0.27
SBDSP1-202ENST00000423945 NPLQ9BXD5 320 aaPredicted RBP16.74■□□□□ 0.27
SBDSP1-202ENST00000423945 EPB41L4BQ9H329 900 aa16.74■□□□□ 0.27
SBDSP1-202ENST00000423945 PRDM7Q9NQW5 492 aa16.74■□□□□ 0.27
SBDSP1-202ENST00000423945 TCRBV16S1A1N1A0A5B0 115 aa16.73■□□□□ 0.27
SBDSP1-202ENST00000423945 TRIM49D1C9J1S8 452 aa16.73■□□□□ 0.27
SBDSP1-202ENST00000423945 MAN1A2O60476 641 aa16.73■□□□□ 0.27
SBDSP1-202ENST00000423945 PRMT3O60678 531 aa16.73■□□□□ 0.27
SBDSP1-202ENST00000423945 ABHD2P08910 425 aa16.73■□□□□ 0.27
SBDSP1-202ENST00000423945 GFAPP14136 432 aa16.73■□□□□ 0.27
SBDSP1-202ENST00000423945 EPB42P16452 691 aa16.73■□□□□ 0.27
SBDSP1-202ENST00000423945 CERS1P27544 350 aa16.73■□□□□ 0.27
SBDSP1-202ENST00000423945 TNFSF10P50591 281 aa16.73■□□□□ 0.27
SBDSP1-202ENST00000423945 RAB38P57729 211 aa16.73■□□□□ 0.27
SBDSP1-202ENST00000423945 SLC26A5P58743 744 aa16.73■□□□□ 0.27
SBDSP1-202ENST00000423945 ARG2P78540 354 aa16.73■□□□□ 0.27
SBDSP1-202ENST00000423945 TLR1Q15399 786 aa16.73■□□□□ 0.27
SBDSP1-202ENST00000423945 PAGE2BQ5JRK9 111 aa16.73■□□□□ 0.27
SBDSP1-202ENST00000423945 GRHL2Q6ISB3 625 aa16.73■□□□□ 0.27
SBDSP1-202ENST00000423945 SCUBE1Q8IWY4 988 aa16.73■□□□□ 0.27
SBDSP1-202ENST00000423945 OR7G3Q8NG95 312 aa16.73■□□□□ 0.27
SBDSP1-202ENST00000423945 FAR2Q96K12 515 aa16.73■□□□□ 0.27
SBDSP1-202ENST00000423945 LPAR4Q99677 370 aa16.73■□□□□ 0.27
SBDSP1-202ENST00000423945 MMP25Q9NPA2 562 aa16.73■□□□□ 0.27
SBDSP1-202ENST00000423945 PRDM9Q9NQV7 894 aa16.73■□□□□ 0.27
SBDSP1-202ENST00000423945 MAP10Q9P2G4 905 aa16.73■□□□□ 0.27
SBDSP1-202ENST00000423945 CPSF2Q9P2I0 782 aaKnown RBP16.73■□□□□ 0.27
SBDSP1-202ENST00000423945 COPG1Q9Y678 874 aaKnown RBP16.73■□□□□ 0.27
SBDSP1-202ENST00000423945 E2F3O00716 465 aa16.72■□□□□ 0.27
SBDSP1-202ENST00000423945 RIPK2O43353 540 aa16.72■□□□□ 0.27
SBDSP1-202ENST00000423945 SH3BGRLO75368 114 aa16.72■□□□□ 0.27
SBDSP1-202ENST00000423945 SBK3P0C264 359 aa16.72■□□□□ 0.27
SBDSP1-202ENST00000423945 MYBL2P10244 700 aa16.72■□□□□ 0.27
SBDSP1-202ENST00000423945 ST13P50502 369 aaKnown RBP16.72■□□□□ 0.27
SBDSP1-202ENST00000423945 UBAP2LQ14157 1087 aaKnown RBP16.72■□□□□ 0.27
SBDSP1-202ENST00000423945 EXT1Q16394 746 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms