RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 QKIQ96PU8 341 aaKnown RBP eCLIP3.4□□□□□ -1.87
TOP2A-201ENST00000423485 TAAR6Q96RI8 345 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 MCMBPQ9BTE3 642 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 C1orf21Q9H246 121 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 ACTL8Q9H568 366 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 PDP2Q9P2J9 529 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 DNAJB11Q9UBS4 358 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 PCOLCE2Q9UKZ9 415 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 SLC9A8Q9Y2E8 581 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 FIS1Q9Y3D6 152 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 PCDHGA7Q9Y5G6 932 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 COL4A6Q14031 1691 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 A0A0A6YYK5 440 aaPredicted RBP3.4□□□□□ -1.87
TOP2A-201ENST00000423485 SLC22A31A6NKX4 558 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 K7ESM1 405 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 M0R1B8 84 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 DCTN3O75935 186 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 GSNP06396 782 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 CXCR1P25024 350 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 PTGER3P43115 390 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 IRAK1P51617 712 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 PMS2P54278 862 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 GALCP54803 685 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 SLC39A14Q15043 492 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 NCF4Q15080 339 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 FAM187BQ17R55 369 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 ASTE1Q2TB18 679 aaPredicted RBP3.4□□□□□ -1.87
TOP2A-201ENST00000423485 BEX5Q5H9J7 111 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 AGBL2Q5U5Z8 902 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 TXNRD3NBQ6F5E7 133 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 PRMT9Q6P2P2 845 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 SYCE2Q6PIF2 218 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 C20orf204Q6ZNR8 217 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 KCTD20Q7Z5Y7 419 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 LSRQ86X29 649 aaPredicted RBP3.4□□□□□ -1.87
TOP2A-201ENST00000423485 TDRPQ86YL5 185 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 TRIM59Q8IWR1 403 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 MIER2Q8N344 545 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 KLHL36Q8N4N3 616 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 CSNK1A1LQ8N752 337 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 ZNF548Q8NEK5 533 aaPredicted RBP3.4□□□□□ -1.87
TOP2A-201ENST00000423485 OR52B6Q8NGF0 335 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 OR8K3Q8NH51 312 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 KAT2BQ92831 832 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 SCAMP4Q969E2 229 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 SPATA5L1Q9BVQ7 753 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 VCXQ9H320 206 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 BEX1Q9HBH7 125 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 Q9N2J8 555 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 PRMT8Q9NR22 394 aaPredicted RBP3.4□□□□□ -1.87
TOP2A-201ENST00000423485 NKIRAS1Q9NYS0 192 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 ZNF180Q9UJW8 692 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 PILRBQ9UKJ0 227 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.4□□□□□ -1.87
TOP2A-201ENST00000423485 GVINP1Q7Z2Y8 2422 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 A0A0A0MRY4 1105 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 D6RAR5 112 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 LEFTY1O75610 366 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 ERAL1O75616 437 aaKnown RBP3.39□□□□□ -1.87
TOP2A-201ENST00000423485 BCAS2O75934 225 aaPredicted RBP3.39□□□□□ -1.87
TOP2A-201ENST00000423485 DHRS4L1P0CG22 281 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 ITGB7P26010 798 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 RORAP35398 523 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 CCR8P51685 355 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 GDF10P55107 478 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 CDH11P55287 796 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 CLDN2P57739 230 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 DCAF7P61962 342 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 PSPHP78330 225 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 SERTAD2Q14140 314 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 CCDC92Q53HC0 331 aaPredicted RBP3.39□□□□□ -1.87
TOP2A-201ENST00000423485 NANOGNBQ7Z5D8 188 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 MTDHQ86UE4 582 aaKnown RBP3.39□□□□□ -1.87
TOP2A-201ENST00000423485 ZNF740Q8NDX6 193 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 OR2I1PQ8NGU4 316 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 SPRYD4Q8WW59 207 aaPredicted RBP3.39□□□□□ -1.87
TOP2A-201ENST00000423485 KISS1RQ969F8 398 aaPredicted RBP3.39□□□□□ -1.87
TOP2A-201ENST00000423485 ABHD17AQ96GS6 310 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 AGAP2Q99490 1192 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 DCTN5Q9BTE1 182 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 EGLN3Q9H6Z9 239 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 PRDM9Q9NQV7 894 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 MRGBPQ9NV56 204 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 TMEM184CQ9NVA4 438 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 TRHDEQ9UKU6 1024 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 PIGLQ9Y2B2 252 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 TMEM98Q9Y2Y6 226 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 DOCK1Q14185 1865 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 NCOR2Q9Y618 2525 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 LOC102723996A0A087X1L8 192 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 PRSS38A1L453 326 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 SH3PXD2BA1X283 911 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 TMEM191CA6NGB0 347 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 AP3D1O14617 1153 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 KCNN4O15554 427 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 RBMXL2O75526 392 aaKnown RBP3.39□□□□□ -1.87
TOP2A-201ENST00000423485 INHBBP09529 407 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 FDFT1P37268 417 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 SGSHP51688 502 aa3.39□□□□□ -1.87
TOP2A-201ENST00000423485 GYS2P54840 703 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms