RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 TRMT10BQ6PF06 316 aaKnown RBP15.1■□□□□ 0.01
COL18A1-205ENST00000423214 NXPE4Q6UWF7 544 aa15.1■□□□□ 0.01
COL18A1-205ENST00000423214 C3P1Q6ZMU1 363 aa15.1■□□□□ 0.01
COL18A1-205ENST00000423214 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.1■□□□□ 0.01
COL18A1-205ENST00000423214 CYP4Z2PQ8N1L4 340 aa15.1■□□□□ 0.01
COL18A1-205ENST00000423214 CA13Q8N1Q1 262 aa15.1■□□□□ 0.01
COL18A1-205ENST00000423214 C17orf53Q8N3J3 647 aaPredicted RBP15.1■□□□□ 0.01
COL18A1-205ENST00000423214 NKAPQ8N5F7 415 aaKnown RBP15.1■□□□□ 0.01
COL18A1-205ENST00000423214 ADAMTS18Q8TE60 1221 aa15.1■□□□□ 0.01
COL18A1-205ENST00000423214 PHF10Q8WUB8 498 aaKnown RBP15.1■□□□□ 0.01
COL18A1-205ENST00000423214 CCT6BQ92526 530 aa15.1■□□□□ 0.01
COL18A1-205ENST00000423214 GAL3ST3Q96A11 431 aa15.1■□□□□ 0.01
COL18A1-205ENST00000423214 LRRC39Q96DD0 335 aa15.1■□□□□ 0.01
COL18A1-205ENST00000423214 PDLIM5Q96HC4 596 aaKnown RBP15.1■□□□□ 0.01
COL18A1-205ENST00000423214 CCDC77Q9BR77 488 aa15.1■□□□□ 0.01
COL18A1-205ENST00000423214 NECTIN3Q9NQS3 549 aa15.1■□□□□ 0.01
COL18A1-205ENST00000423214 COQ3Q9NZJ6 369 aa15.1■□□□□ 0.01
COL18A1-205ENST00000423214 FBXW2Q9UKT8 454 aa15.1■□□□□ 0.01
COL18A1-205ENST00000423214 PPT2Q9UMR5 302 aa15.1■□□□□ 0.01
COL18A1-205ENST00000423214 SLC22A14Q9Y267 594 aa15.1■□□□□ 0.01
COL18A1-205ENST00000423214 MMACHCQ9Y4U1 282 aa15.1■□□□□ 0.01
COL18A1-205ENST00000423214 A0A088AWK7 358 aa15.09■□□□□ 0.01
COL18A1-205ENST00000423214 C4orf51C9J302 202 aa15.09■□□□□ 0.01
COL18A1-205ENST00000423214 E9PLN8 166 aa15.09■□□□□ 0.01
COL18A1-205ENST00000423214 C19orf84I3L1E1 186 aa15.09■□□□□ 0.01
COL18A1-205ENST00000423214 ZNHIT1O43257 154 aa15.09■□□□□ 0.01
COL18A1-205ENST00000423214 CDC40O60508 579 aaKnown RBP eCLIP15.09■□□□□ 0.01
COL18A1-205ENST00000423214 WDR47O94967 919 aa15.09■□□□□ 0.01
COL18A1-205ENST00000423214 ZNF10P21506 573 aaPredicted RBP15.09■□□□□ 0.01
COL18A1-205ENST00000423214 TRHRP34981 398 aaPredicted RBP15.09■□□□□ 0.01
COL18A1-205ENST00000423214 PTGER1P34995 402 aa15.09■□□□□ 0.01
COL18A1-205ENST00000423214 PAFAH1B1P43034 410 aa15.09■□□□□ 0.01
COL18A1-205ENST00000423214 HNMTP50135 292 aa15.09■□□□□ 0.01
COL18A1-205ENST00000423214 MRPS25P82663 173 aaKnown RBP15.09■□□□□ 0.01
COL18A1-205ENST00000423214 HYAL2Q12891 473 aa15.09■□□□□ 0.01
COL18A1-205ENST00000423214 ADAMTSL2Q86TH1 951 aa15.09■□□□□ 0.01
COL18A1-205ENST00000423214 DOLPP1Q86YN1 238 aa15.09■□□□□ 0.01
COL18A1-205ENST00000423214 CEP97Q8IW35 865 aa15.09■□□□□ 0.01
COL18A1-205ENST00000423214 TMEM156Q8N614 296 aa15.09■□□□□ 0.01
COL18A1-205ENST00000423214 B3GNT7Q8NFL0 401 aa15.09■□□□□ 0.01
COL18A1-205ENST00000423214 TTLQ8NG68 377 aa15.09■□□□□ 0.01
COL18A1-205ENST00000423214 CA5BP1Q8WTZ4 195 aa15.09■□□□□ 0.01
COL18A1-205ENST00000423214 CHTF18Q8WVB6 975 aa15.09■□□□□ 0.01
COL18A1-205ENST00000423214 VKORC1Q9BQB6 163 aa15.09■□□□□ 0.01
COL18A1-205ENST00000423214 TRIM31Q9BZY9 425 aa15.09■□□□□ 0.01
COL18A1-205ENST00000423214 KLHL31Q9H511 634 aa15.09■□□□□ 0.01
COL18A1-205ENST00000423214 TRIM45Q9H8W5 580 aaPredicted RBP15.09■□□□□ 0.01
COL18A1-205ENST00000423214 PLAC1Q9HBJ0 212 aa15.09■□□□□ 0.01
COL18A1-205ENST00000423214 PNO1Q9NRX1 252 aaKnown RBP15.09■□□□□ 0.01
COL18A1-205ENST00000423214 IKZF3Q9UKT9 509 aa15.09■□□□□ 0.01
COL18A1-205ENST00000423214 MRPS33Q9Y291 106 aaKnown RBP15.09■□□□□ 0.01
COL18A1-205ENST00000423214 OARD1Q9Y530 152 aa15.09■□□□□ 0.01
COL18A1-205ENST00000423214 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.09■□□□□ 0.01
COL18A1-205ENST00000423214 CELSR1Q9NYQ6 3014 aa15.09■□□□□ 0.01
COL18A1-205ENST00000423214 ADGRG4Q8IZF6 3080 aa15.09■□□□□ 0.01
COL18A1-205ENST00000423214 C2CD3Q4AC94 2353 aa15.09■□□□□ 0.01
COL18A1-205ENST00000423214 MED13LQ71F56 2210 aa15.08■□□□□ 0
COL18A1-205ENST00000423214 FAM95CA0A1B0GW59 222 aa15.08■□□□□ 0
COL18A1-205ENST00000423214 CTAGE15A4D2H0 777 aa15.08■□□□□ 0
COL18A1-205ENST00000423214 KLRC4-KLRK1H3BQV0 150 aa15.08■□□□□ 0
COL18A1-205ENST00000423214 CDC7O00311 574 aa15.08■□□□□ 0
COL18A1-205ENST00000423214 TPOP07202 933 aa15.08■□□□□ 0
COL18A1-205ENST00000423214 GNAZP19086 355 aa15.08■□□□□ 0
COL18A1-205ENST00000423214 RFC3P40938 356 aa15.08■□□□□ 0
COL18A1-205ENST00000423214 ARL4CP56559 192 aa15.08■□□□□ 0
COL18A1-205ENST00000423214 BTN3A2P78410 334 aa15.08■□□□□ 0
COL18A1-205ENST00000423214 CDKL1Q00532 357 aa15.08■□□□□ 0
COL18A1-205ENST00000423214 ZNF460Q14592 562 aa15.08■□□□□ 0
COL18A1-205ENST00000423214 CDSNQ15517 529 aa15.08■□□□□ 0
COL18A1-205ENST00000423214 TERF2Q15554 542 aa15.08■□□□□ 0
COL18A1-205ENST00000423214 RNFT1Q5M7Z0 435 aa15.08■□□□□ 0
COL18A1-205ENST00000423214 STEAP4Q687X5 459 aa15.08■□□□□ 0
COL18A1-205ENST00000423214 SYDE1Q6ZW31 735 aaPredicted RBP15.08■□□□□ 0
COL18A1-205ENST00000423214 CTAGE6Q86UF2 777 aa15.08■□□□□ 0
COL18A1-205ENST00000423214 CD163Q86VB7 1156 aa15.08■□□□□ 0
COL18A1-205ENST00000423214 ZNF227Q86WZ6 799 aa15.08■□□□□ 0
COL18A1-205ENST00000423214 NFAM1Q8NET5 270 aaPredicted RBP15.08■□□□□ 0
COL18A1-205ENST00000423214 SDCCAG3Q96C92 435 aa15.08■□□□□ 0
COL18A1-205ENST00000423214 VMP1Q96GC9 406 aa15.08■□□□□ 0
COL18A1-205ENST00000423214 VPS39Q96JC1 886 aa15.08■□□□□ 0
COL18A1-205ENST00000423214 KRT12Q99456 494 aa15.08■□□□□ 0
COL18A1-205ENST00000423214 CTNNAL1Q9UBT7 734 aa15.08■□□□□ 0
COL18A1-205ENST00000423214 ARHGAP21Q5T5U3 1957 aa15.07■□□□□ 0
COL18A1-205ENST00000423214 A0A0G2JN53 185 aa15.07■□□□□ 0
COL18A1-205ENST00000423214 CLDN4O14493 209 aa15.07■□□□□ 0
COL18A1-205ENST00000423214 ERI3O43414 337 aaKnown RBP15.07■□□□□ 0
COL18A1-205ENST00000423214 H2AFYO75367 372 aaKnown RBP15.07■□□□□ 0
COL18A1-205ENST00000423214 ITGA10O75578 1167 aa15.07■□□□□ 0
COL18A1-205ENST00000423214 SMIM10L1P0DMW3 83 aa15.07■□□□□ 0
COL18A1-205ENST00000423214 HPDP32754 393 aaPredicted RBP15.07■□□□□ 0
COL18A1-205ENST00000423214 PTGS2P35354 604 aa15.07■□□□□ 0
COL18A1-205ENST00000423214 MGAT5Q09328 741 aa15.07■□□□□ 0
COL18A1-205ENST00000423214 SLC13A2Q13183 592 aa15.07■□□□□ 0
COL18A1-205ENST00000423214 SLBPQ14493 270 aaKnown RBP eCLIP15.07■□□□□ 0
COL18A1-205ENST00000423214 TSNQ15631 228 aaKnown RBP15.07■□□□□ 0
COL18A1-205ENST00000423214 ZC3HC1Q86WB0 502 aaKnown RBP15.07■□□□□ 0
COL18A1-205ENST00000423214 ANKMY2Q8IV38 441 aa15.07■□□□□ 0
COL18A1-205ENST00000423214 SULF2Q8IWU5 870 aa15.07■□□□□ 0
COL18A1-205ENST00000423214 KRT78Q8N1N4 520 aa15.07■□□□□ 0
COL18A1-205ENST00000423214 ARMC10Q8N2F6 343 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms