RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 KCNC1P48547 511 aa8.71□□□□□ -1.02
NUP50-206ENST00000422489 IRF8Q02556 426 aa8.71□□□□□ -1.02
NUP50-206ENST00000422489 SLC13A2Q13183 592 aa8.71□□□□□ -1.02
NUP50-206ENST00000422489 UAP1Q16222 522 aaPredicted RBP8.71□□□□□ -1.02
NUP50-206ENST00000422489 INAQ16352 499 aa8.71□□□□□ -1.02
NUP50-206ENST00000422489 MAPKAPK3Q16644 382 aa8.71□□□□□ -1.02
NUP50-206ENST00000422489 PDK4Q16654 411 aa8.71□□□□□ -1.02
NUP50-206ENST00000422489 ZNF324BQ6AW86 544 aaPredicted RBP8.71□□□□□ -1.02
NUP50-206ENST00000422489 ZNF787Q6DD87 383 aa8.71□□□□□ -1.02
NUP50-206ENST00000422489 SLC25A25Q6KCM7 469 aa8.71□□□□□ -1.02
NUP50-206ENST00000422489 ZDHHC24Q6UX98 284 aa8.71□□□□□ -1.02
NUP50-206ENST00000422489 QSOX2Q6ZRP7 698 aa8.71□□□□□ -1.02
NUP50-206ENST00000422489 CMC1Q7Z7K0 106 aa8.71□□□□□ -1.02
NUP50-206ENST00000422489 TBC1D1Q86TI0 1168 aaPredicted RBP8.71□□□□□ -1.02
NUP50-206ENST00000422489 HORMAD2Q8N7B1 307 aa8.71□□□□□ -1.02
NUP50-206ENST00000422489 THAP3Q8WTV1 239 aaPredicted RBP8.71□□□□□ -1.02
NUP50-206ENST00000422489 ZNF592Q92610 1267 aa8.71□□□□□ -1.02
NUP50-206ENST00000422489 GAL3ST3Q96A11 431 aa8.71□□□□□ -1.02
NUP50-206ENST00000422489 KIAA1191Q96A73 305 aa8.71□□□□□ -1.02
NUP50-206ENST00000422489 MS4A6EQ96DS6 147 aa8.71□□□□□ -1.02
NUP50-206ENST00000422489 F2RL3Q96RI0 385 aa8.71□□□□□ -1.02
NUP50-206ENST00000422489 NPAS2Q99743 824 aa8.71□□□□□ -1.02
NUP50-206ENST00000422489 SLX1AQ9BQ83 275 aa8.71□□□□□ -1.02
NUP50-206ENST00000422489 LRRC1Q9BTT6 524 aa8.71□□□□□ -1.02
NUP50-206ENST00000422489 HES7Q9BYE0 225 aa8.71□□□□□ -1.02
NUP50-206ENST00000422489 CD244Q9BZW8 370 aa8.71□□□□□ -1.02
NUP50-206ENST00000422489 AICDAQ9GZX7 198 aa8.71□□□□□ -1.02
NUP50-206ENST00000422489 ALG9Q9H6U8 611 aa8.71□□□□□ -1.02
NUP50-206ENST00000422489 NT5DC2Q9H857 520 aa8.71□□□□□ -1.02
NUP50-206ENST00000422489 COPS7BQ9H9Q2 264 aaPredicted RBP8.71□□□□□ -1.02
NUP50-206ENST00000422489 NMRAL1Q9HBL8 299 aa8.71□□□□□ -1.02
NUP50-206ENST00000422489 PRTFDC1Q9NRG1 225 aa8.71□□□□□ -1.02
NUP50-206ENST00000422489 GPRC5BQ9NZH0 403 aa8.71□□□□□ -1.02
NUP50-206ENST00000422489 LRFN1Q9P244 771 aa8.71□□□□□ -1.02
NUP50-206ENST00000422489 SH3BGRL2Q9UJC5 107 aa8.71□□□□□ -1.02
NUP50-206ENST00000422489 FBXW2Q9UKT8 454 aa8.71□□□□□ -1.02
NUP50-206ENST00000422489 ZNF490Q9ULM2 529 aaPredicted RBP8.71□□□□□ -1.02
NUP50-206ENST00000422489 ACOT9Q9Y305 439 aa8.71□□□□□ -1.02
NUP50-206ENST00000422489 FER1L5A0AVI2 2057 aa8.7□□□□□ -1.02
NUP50-206ENST00000422489 A0A088AWK7 358 aa8.7□□□□□ -1.02
NUP50-206ENST00000422489 ESYT3A0FGR9 886 aa8.7□□□□□ -1.02
NUP50-206ENST00000422489 LRIT2A6NDA9 550 aa8.7□□□□□ -1.02
NUP50-206ENST00000422489 SUPT3HB4E1H0 165 aa8.7□□□□□ -1.02
NUP50-206ENST00000422489 UBXN8O00124 270 aa8.7□□□□□ -1.02
NUP50-206ENST00000422489 CLDN4O14493 209 aa8.7□□□□□ -1.02
NUP50-206ENST00000422489 ZG16O60844 167 aa8.7□□□□□ -1.02
NUP50-206ENST00000422489 SUPT3HO75486 399 aa8.7□□□□□ -1.02
NUP50-206ENST00000422489 CLEC3AO75596 197 aa8.7□□□□□ -1.02
NUP50-206ENST00000422489 WISP3O95389 354 aaPredicted RBP8.7□□□□□ -1.02
NUP50-206ENST00000422489 IFNA16P05015 189 aa8.7□□□□□ -1.02
NUP50-206ENST00000422489 PCNAP12004 261 aa8.7□□□□□ -1.02
NUP50-206ENST00000422489 TNNI3P19429 210 aa8.7□□□□□ -1.02
NUP50-206ENST00000422489 ZNF10P21506 573 aaPredicted RBP8.7□□□□□ -1.02
NUP50-206ENST00000422489 TPP2P29144 1249 aaPredicted RBP8.7□□□□□ -1.02
NUP50-206ENST00000422489 HNRNPH1P31943 449 aaKnown RBP8.7□□□□□ -1.02
NUP50-206ENST00000422489 HPDP32754 393 aaPredicted RBP8.7□□□□□ -1.02
NUP50-206ENST00000422489 STX2P32856 288 aa8.7□□□□□ -1.02
NUP50-206ENST00000422489 ALDH6A1Q02252 535 aaKnown RBP8.7□□□□□ -1.02
NUP50-206ENST00000422489 GUCY2DQ02846 1103 aa8.7□□□□□ -1.02
NUP50-206ENST00000422489 RBPJQ06330 500 aa8.7□□□□□ -1.02
NUP50-206ENST00000422489 CKAP4Q07065 602 aaKnown RBP8.7□□□□□ -1.02
NUP50-206ENST00000422489 DLG1Q12959 904 aa8.7□□□□□ -1.02
NUP50-206ENST00000422489 CHIT1Q13231 466 aa8.7□□□□□ -1.02
NUP50-206ENST00000422489 LAPTM5Q13571 262 aa8.7□□□□□ -1.02
NUP50-206ENST00000422489 BMPR2Q13873 1038 aa8.7□□□□□ -1.02
NUP50-206ENST00000422489 EFTUD2Q15029 972 aaKnown RBP eCLIP8.7□□□□□ -1.02
NUP50-206ENST00000422489 PAGE2BQ5JRK9 111 aa8.7□□□□□ -1.02
NUP50-206ENST00000422489 CDKL4Q5MAI5 379 aa8.7□□□□□ -1.02
NUP50-206ENST00000422489 ADNP2Q6IQ32 1131 aa8.7□□□□□ -1.02
NUP50-206ENST00000422489 C8orf74Q6P047 294 aa8.7□□□□□ -1.02
NUP50-206ENST00000422489 TRIM40Q6P9F5 258 aa8.7□□□□□ -1.02
NUP50-206ENST00000422489 GALNTL5Q7Z4T8 443 aa8.7□□□□□ -1.02
NUP50-206ENST00000422489 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.7□□□□□ -1.02
NUP50-206ENST00000422489 CLNKQ7Z7G1 428 aa8.7□□□□□ -1.02
NUP50-206ENST00000422489 FAM47BQ8NA70 645 aa8.7□□□□□ -1.02
NUP50-206ENST00000422489 ELP5Q8TE02 316 aa8.7□□□□□ -1.02
NUP50-206ENST00000422489 SREK1Q8WXA9 508 aaKnown RBP8.7□□□□□ -1.02
NUP50-206ENST00000422489 NXNL1Q96CM4 212 aa8.7□□□□□ -1.02
NUP50-206ENST00000422489 PTCD3Q96EY7 689 aaKnown RBP8.7□□□□□ -1.02
NUP50-206ENST00000422489 UBXN10Q96LJ8 280 aa8.7□□□□□ -1.02
NUP50-206ENST00000422489 EFCAB11Q9BUY7 163 aa8.7□□□□□ -1.02
NUP50-206ENST00000422489 NPLQ9BXD5 320 aaPredicted RBP8.7□□□□□ -1.02
NUP50-206ENST00000422489 REXO4Q9GZR2 422 aaKnown RBP8.7□□□□□ -1.02
NUP50-206ENST00000422489 TSPAN10Q9H1Z9 355 aaPredicted RBP8.7□□□□□ -1.02
NUP50-206ENST00000422489 PTBP2Q9UKA9 531 aaKnown RBP8.7□□□□□ -1.02
NUP50-206ENST00000422489 ANGPTL3Q9Y5C1 460 aa8.7□□□□□ -1.02
NUP50-206ENST00000422489 CCDC88CQ9P219 2028 aa8.7□□□□□ -1.02
NUP50-206ENST00000422489 SNRNP200O75643 2136 aaKnown RBP8.69□□□□□ -1.02
NUP50-206ENST00000422489 SEC16AO15027 2179 aa8.69□□□□□ -1.02
NUP50-206ENST00000422489 TRBV11-1A0A0K0K1C0 115 aa8.69□□□□□ -1.02
NUP50-206ENST00000422489 TCRBV16S1A1N1A0A5B0 115 aa8.69□□□□□ -1.02
NUP50-206ENST00000422489 SAGE2PA6NJ88 616 aa8.69□□□□□ -1.02
NUP50-206ENST00000422489 NPIPA5E9PKD4 350 aa8.69□□□□□ -1.02
NUP50-206ENST00000422489 SAP18O00422 153 aaKnown RBP8.69□□□□□ -1.02
NUP50-206ENST00000422489 CCL21O00585 134 aa8.69□□□□□ -1.02
NUP50-206ENST00000422489 PRAMEF4O60810 478 aa8.69□□□□□ -1.02
NUP50-206ENST00000422489 WISP2O76076 250 aa8.69□□□□□ -1.02
NUP50-206ENST00000422489 MYO1DO94832 1006 aa8.69□□□□□ -1.02
NUP50-206ENST00000422489 TGFB1P01137 390 aa8.69□□□□□ -1.02
NUP50-206ENST00000422489 STSP08842 583 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms