RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 AICDAQ9GZX7 198 aa14.9□□□□□ -0.02
BRAT1-202ENST00000421712 DMRT3Q9NQL9 472 aa14.9□□□□□ -0.02
BRAT1-202ENST00000421712 SNX6Q9UNH7 406 aa14.9□□□□□ -0.02
BRAT1-202ENST00000421712 CACNA1GO43497 2377 aa14.89□□□□□ -0.03
BRAT1-202ENST00000421712 SCN2AQ99250 2005 aa14.89□□□□□ -0.03
BRAT1-202ENST00000421712 IDSB3KWA1 339 aa14.89□□□□□ -0.03
BRAT1-202ENST00000421712 C4orf51C9J302 202 aa14.89□□□□□ -0.03
BRAT1-202ENST00000421712 TRIM13O60858 407 aa14.89□□□□□ -0.03
BRAT1-202ENST00000421712 DNAJB6O75190 326 aa14.89□□□□□ -0.03
BRAT1-202ENST00000421712 JRKO75564 520 aa14.89□□□□□ -0.03
BRAT1-202ENST00000421712 CDC123O75794 336 aaPredicted RBP14.89□□□□□ -0.03
BRAT1-202ENST00000421712 IL10P22301 178 aa14.89□□□□□ -0.03
BRAT1-202ENST00000421712 MMP11P24347 488 aa14.89□□□□□ -0.03
BRAT1-202ENST00000421712 HMOX2P30519 316 aa14.89□□□□□ -0.03
BRAT1-202ENST00000421712 MTTPP55157 894 aa14.89□□□□□ -0.03
BRAT1-202ENST00000421712 NAA20P61599 178 aa14.89□□□□□ -0.03
BRAT1-202ENST00000421712 LCP2Q13094 533 aa14.89□□□□□ -0.03
BRAT1-202ENST00000421712 ATP1A4Q13733 1029 aa14.89□□□□□ -0.03
BRAT1-202ENST00000421712 GGTA1PQ4G0N0 100 aa14.89□□□□□ -0.03
BRAT1-202ENST00000421712 DEPDC1Q5TB30 811 aa14.89□□□□□ -0.03
BRAT1-202ENST00000421712 KHDRBS2Q5VWX1 349 aaKnown RBP14.89□□□□□ -0.03
BRAT1-202ENST00000421712 FRG2Q64ET8 278 aa14.89□□□□□ -0.03
BRAT1-202ENST00000421712 ABHD17CQ6PCB6 329 aa14.89□□□□□ -0.03
BRAT1-202ENST00000421712 CDYL2Q8N8U2 506 aa14.89□□□□□ -0.03
BRAT1-202ENST00000421712 ADAMTS17Q8TE56 1095 aa14.89□□□□□ -0.03
BRAT1-202ENST00000421712 SELENOMQ8WWX9 145 aa14.89□□□□□ -0.03
BRAT1-202ENST00000421712 METTL21AQ8WXB1 218 aa14.89□□□□□ -0.03
BRAT1-202ENST00000421712 RGMAQ96B86 450 aa14.89□□□□□ -0.03
BRAT1-202ENST00000421712 TBC1D20Q96BZ9 403 aa14.89□□□□□ -0.03
BRAT1-202ENST00000421712 PGM2Q96G03 612 aa14.89□□□□□ -0.03
BRAT1-202ENST00000421712 FER1L6-AS2Q96M78 137 aa14.89□□□□□ -0.03
BRAT1-202ENST00000421712 FRG2BQ96QU4 278 aa14.89□□□□□ -0.03
BRAT1-202ENST00000421712 SERINC2Q96SA4 455 aa14.89□□□□□ -0.03
BRAT1-202ENST00000421712 ZNF382Q96SR6 550 aa14.89□□□□□ -0.03
BRAT1-202ENST00000421712 ROGDIQ9GZN7 287 aa14.89□□□□□ -0.03
BRAT1-202ENST00000421712 GSTO2Q9H4Y5 243 aa14.89□□□□□ -0.03
BRAT1-202ENST00000421712 MID1IP1Q9NPA3 183 aa14.89□□□□□ -0.03
BRAT1-202ENST00000421712 TRPS1Q9UHF7 1281 aa14.89□□□□□ -0.03
BRAT1-202ENST00000421712 KCNMB2Q9Y691 235 aa14.89□□□□□ -0.03
BRAT1-202ENST00000421712 A0A1B0GTL3 188 aa14.88□□□□□ -0.03
BRAT1-202ENST00000421712 ERVH48-1M5A8F1 160 aa14.88□□□□□ -0.03
BRAT1-202ENST00000421712 FOXE1O00358 373 aaPredicted RBP14.88□□□□□ -0.03
BRAT1-202ENST00000421712 RTCAO00442 366 aaKnown RBP14.88□□□□□ -0.03
BRAT1-202ENST00000421712 B4GALT2O60909 372 aa14.88□□□□□ -0.03
BRAT1-202ENST00000421712 TBX6O95947 436 aaPredicted RBP14.88□□□□□ -0.03
BRAT1-202ENST00000421712 RNH1P13489 461 aaKnown RBP14.88□□□□□ -0.03
BRAT1-202ENST00000421712 ALDH3A1P30838 453 aa14.88□□□□□ -0.03
BRAT1-202ENST00000421712 SSR2P43308 183 aa14.88□□□□□ -0.03
BRAT1-202ENST00000421712 RRADP55042 308 aa14.88□□□□□ -0.03
BRAT1-202ENST00000421712 PKNOX1P55347 436 aa14.88□□□□□ -0.03
BRAT1-202ENST00000421712 CHAF1BQ13112 559 aa14.88□□□□□ -0.03
BRAT1-202ENST00000421712 PCLAFQ15004 111 aa14.88□□□□□ -0.03
BRAT1-202ENST00000421712 ADPRMQ3LIE5 342 aa14.88□□□□□ -0.03
BRAT1-202ENST00000421712 PPP1R32Q7Z5V6 425 aa14.88□□□□□ -0.03
BRAT1-202ENST00000421712 MRGPREQ86SM8 312 aa14.88□□□□□ -0.03
BRAT1-202ENST00000421712 SHISA5Q8N114 240 aa14.88□□□□□ -0.03
BRAT1-202ENST00000421712 WDR20Q8TBZ3 569 aa14.88□□□□□ -0.03
BRAT1-202ENST00000421712 METTL6Q8TCB7 284 aa14.88□□□□□ -0.03
BRAT1-202ENST00000421712 TTC9Q92623 222 aa14.88□□□□□ -0.03
BRAT1-202ENST00000421712 UBL7Q96S82 380 aaPredicted RBP14.88□□□□□ -0.03
BRAT1-202ENST00000421712 SERPINI1Q99574 410 aa14.88□□□□□ -0.03
BRAT1-202ENST00000421712 TBCDQ9BTW9 1192 aa14.88□□□□□ -0.03
BRAT1-202ENST00000421712 MECRQ9BV79 373 aa14.88□□□□□ -0.03
BRAT1-202ENST00000421712 SHCBP1LQ9BZQ2 653 aa14.88□□□□□ -0.03
BRAT1-202ENST00000421712 ING2Q9H160 280 aa14.88□□□□□ -0.03
BRAT1-202ENST00000421712 CLK4Q9HAZ1 481 aaKnown RBP14.88□□□□□ -0.03
BRAT1-202ENST00000421712 P4HTMQ9NXG6 502 aa14.88□□□□□ -0.03
BRAT1-202ENST00000421712 TSC22D4Q9Y3Q8 395 aa14.88□□□□□ -0.03
BRAT1-202ENST00000421712 OR2W5A6NFC9 320 aa14.87□□□□□ -0.03
BRAT1-202ENST00000421712 TYROBPO43914 113 aa14.87□□□□□ -0.03
BRAT1-202ENST00000421712 ALOX12BO75342 701 aa14.87□□□□□ -0.03
BRAT1-202ENST00000421712 PDYNP01213 254 aa14.87□□□□□ -0.03
BRAT1-202ENST00000421712 KRT6AP02538 564 aa14.87□□□□□ -0.03
BRAT1-202ENST00000421712 KRT6BP04259 564 aa14.87□□□□□ -0.03
BRAT1-202ENST00000421712 FHP07954 510 aa14.87□□□□□ -0.03
BRAT1-202ENST00000421712 FAM87AP0C7U9 286 aa14.87□□□□□ -0.03
BRAT1-202ENST00000421712 NEFHP12036 1026 aa14.87□□□□□ -0.03
BRAT1-202ENST00000421712 JAK1P23458 1154 aa14.87□□□□□ -0.03
BRAT1-202ENST00000421712 CERS1P27544 350 aa14.87□□□□□ -0.03
BRAT1-202ENST00000421712 KRT6CP48668 564 aa14.87□□□□□ -0.03
BRAT1-202ENST00000421712 CCL11P51671 97 aa14.87□□□□□ -0.03
BRAT1-202ENST00000421712 POLE2P56282 527 aa14.87□□□□□ -0.03
BRAT1-202ENST00000421712 RUNX2Q13950 521 aa14.87□□□□□ -0.03
BRAT1-202ENST00000421712 LINC00303Q3SY05 128 aa14.87□□□□□ -0.03
BRAT1-202ENST00000421712 C10orf62Q5T681 223 aaPredicted RBP14.87□□□□□ -0.03
BRAT1-202ENST00000421712 OR4C11Q6IEV9 310 aa14.87□□□□□ -0.03
BRAT1-202ENST00000421712 MED25Q71SY5 747 aa14.87□□□□□ -0.03
BRAT1-202ENST00000421712 HDXQ7Z353 690 aa14.87□□□□□ -0.03
BRAT1-202ENST00000421712 CA13Q8N1Q1 262 aa14.87□□□□□ -0.03
BRAT1-202ENST00000421712 TMEM102Q8N9M5 508 aaPredicted RBP14.87□□□□□ -0.03
BRAT1-202ENST00000421712 PPP1R14CQ8TAE6 165 aa14.87□□□□□ -0.03
BRAT1-202ENST00000421712 NACC2Q96BF6 587 aa14.87□□□□□ -0.03
BRAT1-202ENST00000421712 C8orf44Q96CB5 159 aa14.87□□□□□ -0.03
BRAT1-202ENST00000421712 QRFPRQ96P65 431 aa14.87□□□□□ -0.03
BRAT1-202ENST00000421712 OR1F2PQ96R84 312 aa14.87□□□□□ -0.03
BRAT1-202ENST00000421712 NPLQ9BXD5 320 aaPredicted RBP14.87□□□□□ -0.03
BRAT1-202ENST00000421712 VN1R1Q9GZP7 353 aa14.87□□□□□ -0.03
BRAT1-202ENST00000421712 PRDM7Q9NQW5 492 aa14.87□□□□□ -0.03
BRAT1-202ENST00000421712 FARSBQ9NSD9 589 aaKnown RBP14.87□□□□□ -0.03
BRAT1-202ENST00000421712 FBXL4Q9UKA2 621 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms