RNA–Protein interactions for RNA: ENST00000420743.6

HNRNPC-202, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2 BASIC

Gene HNRNPC, Length 1,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-202ENST00000420743 C19orf60Q96EN9 201 aa11.24□□□□□ -0.61
HNRNPC-202ENST00000420743 FAR2Q96K12 515 aa11.24□□□□□ -0.61
HNRNPC-202ENST00000420743 CNDP1Q96KN2 507 aa11.24□□□□□ -0.61
HNRNPC-202ENST00000420743 IMMP1LQ96LU5 166 aa11.24□□□□□ -0.61
HNRNPC-202ENST00000420743 SORBS1Q9BX66 1292 aaKnown RBP11.24□□□□□ -0.61
HNRNPC-202ENST00000420743 NT5DC2Q9H857 520 aa11.24□□□□□ -0.61
HNRNPC-202ENST00000420743 NECTIN3Q9NQS3 549 aa11.24□□□□□ -0.61
HNRNPC-202ENST00000420743 PLA2G3Q9NZ20 509 aa11.24□□□□□ -0.61
HNRNPC-202ENST00000420743 MAP10Q9P2G4 905 aa11.24□□□□□ -0.61
HNRNPC-202ENST00000420743 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.24□□□□□ -0.61
HNRNPC-202ENST00000420743 PCDHGB7Q9Y5F8 929 aa11.24□□□□□ -0.61
HNRNPC-202ENST00000420743 V9GYY5 206 aaPredicted RBP11.24□□□□□ -0.61
HNRNPC-202ENST00000420743 A0A1B0GTL3 188 aa11.23□□□□□ -0.61
HNRNPC-202ENST00000420743 MYOCOSA0A1B0GUC4 107 aa11.23□□□□□ -0.61
HNRNPC-202ENST00000420743 A0A1W2PQ72 361 aa11.23□□□□□ -0.61
HNRNPC-202ENST00000420743 SMIM23A6NLE4 172 aa11.23□□□□□ -0.61
HNRNPC-202ENST00000420743 A8MUA0 341 aa11.23□□□□□ -0.61
HNRNPC-202ENST00000420743 TSPAN8P19075 237 aa11.23□□□□□ -0.61
HNRNPC-202ENST00000420743 CNTFP26441 200 aa11.23□□□□□ -0.61
HNRNPC-202ENST00000420743 CASP2P42575 452 aa11.23□□□□□ -0.61
HNRNPC-202ENST00000420743 SLCO1A2P46721 670 aa11.23□□□□□ -0.61
HNRNPC-202ENST00000420743 FOXK1P85037 733 aa11.23□□□□□ -0.61
HNRNPC-202ENST00000420743 E2F2Q14209 437 aa11.23□□□□□ -0.61
HNRNPC-202ENST00000420743 TBCCQ15814 346 aa11.23□□□□□ -0.61
HNRNPC-202ENST00000420743 BTBD16Q32M84 506 aa11.23□□□□□ -0.61
HNRNPC-202ENST00000420743 ADPRMQ3LIE5 342 aa11.23□□□□□ -0.61
HNRNPC-202ENST00000420743 PAGE2BQ5JRK9 111 aa11.23□□□□□ -0.61
HNRNPC-202ENST00000420743 IRAK1BP1Q5VVH5 260 aa11.23□□□□□ -0.61
HNRNPC-202ENST00000420743 MED27Q6P2C8 311 aa11.23□□□□□ -0.61
HNRNPC-202ENST00000420743 ABHD17CQ6PCB6 329 aa11.23□□□□□ -0.61
HNRNPC-202ENST00000420743 ZNF793Q6ZN11 406 aa11.23□□□□□ -0.61
HNRNPC-202ENST00000420743 CUZD1Q86UP6 607 aa11.23□□□□□ -0.61
HNRNPC-202ENST00000420743 CYP4X1Q8N118 509 aa11.23□□□□□ -0.61
HNRNPC-202ENST00000420743 TMEM151AQ8N4L1 468 aa11.23□□□□□ -0.61
HNRNPC-202ENST00000420743 CATSPER1Q8NEC5 780 aa11.23□□□□□ -0.61
HNRNPC-202ENST00000420743 OR2L5Q8NG80 312 aa11.23□□□□□ -0.61
HNRNPC-202ENST00000420743 OR7G3Q8NG95 312 aa11.23□□□□□ -0.61
HNRNPC-202ENST00000420743 OR52B6Q8NGF0 335 aa11.23□□□□□ -0.61
HNRNPC-202ENST00000420743 ZNF473Q8WTR7 871 aaKnown RBP11.23□□□□□ -0.61
HNRNPC-202ENST00000420743 UBLCP1Q8WVY7 318 aaPredicted RBP11.23□□□□□ -0.61
HNRNPC-202ENST00000420743 VPS50Q96JG6 964 aa11.23□□□□□ -0.61
HNRNPC-202ENST00000420743 PTCHD1Q96NR3 888 aa11.23□□□□□ -0.61
HNRNPC-202ENST00000420743 QRFPRQ96P65 431 aa11.23□□□□□ -0.61
HNRNPC-202ENST00000420743 OR1F2PQ96R84 312 aa11.23□□□□□ -0.61
HNRNPC-202ENST00000420743 CSF3RQ99062 836 aa11.23□□□□□ -0.61
HNRNPC-202ENST00000420743 MTERF1Q99551 399 aaKnown RBP11.23□□□□□ -0.61
HNRNPC-202ENST00000420743 OR51B5Q9H339 312 aa11.23□□□□□ -0.61
HNRNPC-202ENST00000420743 NOL11Q9H8H0 719 aaKnown RBP11.23□□□□□ -0.61
HNRNPC-202ENST00000420743 IPPKQ9H8X2 491 aa11.23□□□□□ -0.61
HNRNPC-202ENST00000420743 ACTR8Q9H981 624 aa11.23□□□□□ -0.61
HNRNPC-202ENST00000420743 SLAMF7Q9NQ25 335 aa11.23□□□□□ -0.61
HNRNPC-202ENST00000420743 RIC8BQ9NVN3 520 aa11.23□□□□□ -0.61
HNRNPC-202ENST00000420743 TMEM216Q9P0N5 145 aa11.23□□□□□ -0.61
HNRNPC-202ENST00000420743 C5AR2Q9P296 337 aa11.23□□□□□ -0.61
HNRNPC-202ENST00000420743 B3GNT3Q9Y2A9 372 aa11.23□□□□□ -0.61
HNRNPC-202ENST00000420743 RNF11Q9Y3C5 154 aa11.23□□□□□ -0.61
HNRNPC-202ENST00000420743 A0A1W2PPM1 405 aa11.22□□□□□ -0.61
HNRNPC-202ENST00000420743 A8MUI8 341 aa11.22□□□□□ -0.61
HNRNPC-202ENST00000420743 MAGEB17A8MXT2 336 aa11.22□□□□□ -0.61
HNRNPC-202ENST00000420743 PSMD12O00232 456 aaPredicted RBP11.22□□□□□ -0.61
HNRNPC-202ENST00000420743 PPP6CO00743 305 aa11.22□□□□□ -0.61
HNRNPC-202ENST00000420743 OR7A17O14581 309 aa11.22□□□□□ -0.61
HNRNPC-202ENST00000420743 PRMT3O60678 531 aa11.22□□□□□ -0.61
HNRNPC-202ENST00000420743 SERPINA7P05543 415 aa11.22□□□□□ -0.61
HNRNPC-202ENST00000420743 UQCRHP07919 91 aa11.22□□□□□ -0.61
HNRNPC-202ENST00000420743 RBP1P09455 135 aa11.22□□□□□ -0.61
HNRNPC-202ENST00000420743 RNH1P13489 461 aaKnown RBP11.22□□□□□ -0.61
HNRNPC-202ENST00000420743 PPP2R1BP30154 601 aa11.22□□□□□ -0.61
HNRNPC-202ENST00000420743 ARL1P40616 181 aaPredicted RBP11.22□□□□□ -0.61
HNRNPC-202ENST00000420743 UQCRFS1P47985 274 aa11.22□□□□□ -0.61
HNRNPC-202ENST00000420743 NEK2P51955 445 aa11.22□□□□□ -0.61
HNRNPC-202ENST00000420743 VSNL1P62760 191 aa11.22□□□□□ -0.61
HNRNPC-202ENST00000420743 LAPTM5Q13571 262 aa11.22□□□□□ -0.61
HNRNPC-202ENST00000420743 PCBP2Q15366 365 aaKnown RBP eCLIP11.22□□□□□ -0.612e-70■■■□□ 16.7
HNRNPC-202ENST00000420743 CPSF6Q16630 551 aaKnown RBP eCLIP11.22□□□□□ -0.613e-7■■■□□ 15.6
HNRNPC-202ENST00000420743 HIST2H2ACQ16777 129 aaPredicted RBP11.22□□□□□ -0.61
HNRNPC-202ENST00000420743 HIST2H2AA3Q6FI13 130 aa11.22□□□□□ -0.61
HNRNPC-202ENST00000420743 GRHL2Q6ISB3 625 aa11.22□□□□□ -0.61
HNRNPC-202ENST00000420743 TRIM40Q6P9F5 258 aa11.22□□□□□ -0.61
HNRNPC-202ENST00000420743 PAPD4Q6PIY7 484 aaKnown RBP11.22□□□□□ -0.61
HNRNPC-202ENST00000420743 IGFL3Q6UXB1 125 aa11.22□□□□□ -0.61
HNRNPC-202ENST00000420743 CLNKQ7Z7G1 428 aa11.22□□□□□ -0.61
HNRNPC-202ENST00000420743 LAS2Q8IYD9 372 aa11.22□□□□□ -0.61
HNRNPC-202ENST00000420743 ZADH2Q8N4Q0 377 aa11.22□□□□□ -0.61
HNRNPC-202ENST00000420743 HUS1BQ8NHY5 278 aa11.22□□□□□ -0.61
HNRNPC-202ENST00000420743 CPT1CQ8TCG5 803 aa11.22□□□□□ -0.61
HNRNPC-202ENST00000420743 PNPLA2Q96AD5 504 aa11.22□□□□□ -0.61
HNRNPC-202ENST00000420743 MIB2Q96AX9 1013 aa11.22□□□□□ -0.61
HNRNPC-202ENST00000420743 MTFMTQ96DP5 389 aaKnown RBP11.22□□□□□ -0.61
HNRNPC-202ENST00000420743 TUBB6Q9BUF5 446 aa11.22□□□□□ -0.61
HNRNPC-202ENST00000420743 MS4A8Q9BY19 250 aa11.22□□□□□ -0.61
HNRNPC-202ENST00000420743 ILKAPQ9H0C8 392 aaPredicted RBP11.22□□□□□ -0.61
HNRNPC-202ENST00000420743 ZBTB26Q9HCK0 441 aa11.22□□□□□ -0.61
HNRNPC-202ENST00000420743 PRDM7Q9NQW5 492 aa11.22□□□□□ -0.61
HNRNPC-202ENST00000420743 SHANK1Q9Y566 2161 aa11.22□□□□□ -0.61
HNRNPC-202ENST00000420743 CPAMD8Q8IZJ3 1885 aa11.21□□□□□ -0.61
HNRNPC-202ENST00000420743 TGFBR3LH3BV60 316 aa11.21□□□□□ -0.61
HNRNPC-202ENST00000420743 MAN1A2O60476 641 aa11.21□□□□□ -0.61
HNRNPC-202ENST00000420743 JAK1P23458 1154 aa11.21□□□□□ -0.61
HNRNPC-202ENST00000420743 OR4D2P58180 307 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms