RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 ZC4H2Q9NQZ6 224 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 PCDHB16Q9NRJ7 776 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 FAM207AQ9NSI2 230 aaPredicted RBP3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 PNPLA3Q9NST1 481 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 GDAP2Q9NXN4 497 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 MRPL39Q9NYK5 338 aaKnown RBP3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 TAS2R1Q9NYW7 299 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 NPAP1Q9NZP6 1156 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 VPS54Q9P1Q0 977 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 MBD2Q9UBB5 411 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 PCYOX1Q9UHG3 505 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 DBNLQ9UJU6 430 aaKnown RBP3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 APPL1Q9UKG1 709 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 MKLN1Q9UL63 735 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 RBMX2Q9Y388 322 aaKnown RBP3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 AP4B1Q9Y6B7 739 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 C1orf167Q5SNV9 1468 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 KIF1BO60333 1816 aa3.21□□□□□ -1.89
SDCBPP3-201ENST00000419629 C10orf71Q711Q0 1435 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 SLIT1O75093 1534 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 A0A0G2JPF8 293 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 A0A1W2PQ67 120 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 OR5K3A6NET4 321 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 SMCO2A6NFE2 343 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 NPIPB15A6NHN6 443 aaPredicted RBP3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 TRPC5OSA6NMA1 111 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 OR5K4A6NMS3 321 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 HNRNPCL3B7ZW38 293 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 H3BSA7 217 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 PSMD11O00231 422 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 VCYO14598 125 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 HS3ST1O14792 307 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 TM9SF1O15321 606 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 MID1O15344 667 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 ZBTB43O43298 467 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 KLHL41O60662 606 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 TOM1O60784 492 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 NDUFS3O75489 264 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 SPAG6O75602 509 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 MYO1DO94832 1006 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 NKX2-2O95096 273 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 OR5F1O95221 314 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 DEXIO95424 95 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 DDX58O95786 925 aaKnown RBP3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 TTC4O95801 387 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 ECDO95905 644 aaPredicted RBP3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 BCL10O95999 233 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 ASS1P00966 412 aaKnown RBP3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 EGFP01133 1207 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 FGGP02679 453 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 CLEC3BP05452 202 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 RPS17P08708 135 aaKnown RBP3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 TFPTP0C1Z6 253 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 POLR2MP0CAP2 368 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 HNRNPCL4P0DMR1 293 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 MCF2P10911 925 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 KRT13P13646 458 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 GLULP15104 373 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 IFNAR1P17181 557 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 GAP43P17677 238 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 AMD1P17707 334 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 UBA1P22314 1058 aaKnown RBP3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 DCKP27707 260 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 IL12AP29459 219 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 EEF1DP29692 281 aaKnown RBP3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 NMT1P30419 496 aaKnown RBP3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 FOXN2P32314 431 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 RCVRNP35243 200 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 NAMPTP43490 491 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 EEF1A1P68104 462 aaKnown RBP3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 MRPS15P82914 257 aaKnown RBP3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 MYBPC1Q00872 1141 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 PRKCEQ02156 737 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 GBE1Q04446 702 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 KLHL30Q0D2K2 578 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 CDC20Q12834 499 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 TMEM115Q12893 351 aaPredicted RBP3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 RALGDSQ12967 914 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 CSTF3Q12996 717 aaKnown RBP3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 MAD2L1Q13257 205 aaPredicted RBP3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 FRG1Q14331 258 aaKnown RBP3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 POU6F1Q14863 301 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 TMED2Q15363 201 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 TRIP13Q15645 432 aaPredicted RBP3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 STK11Q15831 433 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 DUSP7Q16829 419 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 ALG11Q2TAA5 492 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 SETMARQ53H47 684 aaPredicted RBP3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 PAPPA-AS1Q5QFB9 102 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 RABGAP1LQ5R372 815 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 PPM1LQ5SGD2 360 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 CLVS2Q5SYC1 327 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 RNASEH2BQ5TBB1 312 aaKnown RBP3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 SEL1L2Q5TEA6 688 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 EEF1A1P5Q5VTE0 462 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 NANOGP8Q6NSW7 305 aa3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 CCDC137Q6PK04 289 aaKnown RBP3.21□□□□□ -1.9
SDCBPP3-201ENST00000419629 XKRXQ6PP77 449 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms