RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 CERS1P27544 350 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 IL12AP29459 219 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 HNRNPH1P31943 449 aaKnown RBP5.68□□□□□ -1.5
HMGB3-202ENST00000419110 SOAT1P35610 550 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 MPLP40238 635 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 BUD31P41223 144 aaPredicted RBP5.68□□□□□ -1.5
HMGB3-202ENST00000419110 ARL4DP49703 201 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 HNRNPFP52597 415 aaKnown RBP5.68□□□□□ -1.5
HMGB3-202ENST00000419110 DGKQP52824 942 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 MTTPP55157 894 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 TAS2R50P59544 299 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 TRA2BP62995 288 aaKnown RBP5.68□□□□□ -1.5
HMGB3-202ENST00000419110 YBX1P67809 324 aaKnown RBP5.68□□□□□ -1.5
HMGB3-202ENST00000419110 RAE1P78406 368 aaKnown RBP5.68□□□□□ -1.5
HMGB3-202ENST00000419110 ELF3P78545 371 aaPredicted RBP5.68□□□□□ -1.5
HMGB3-202ENST00000419110 RELAQ04206 551 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 CAPRIN1Q14444 709 aaKnown RBP5.68□□□□□ -1.5
HMGB3-202ENST00000419110 NR1D2Q14995 579 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 HEPACAMQ14CZ8 416 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 KIAA0040Q15053 153 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 CCDC6Q16204 474 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 UGT8Q16880 541 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 DEFB110Q30KQ9 67 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 PGS1Q32NB8 556 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 ADPRMQ3LIE5 342 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 ZC3H12BQ5HYM0 836 aaKnown RBP5.68□□□□□ -1.5
HMGB3-202ENST00000419110 WASHC2DQ5SRD0 308 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 CPTPQ5TA50 214 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 DEPDC1Q5TB30 811 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 NIPAL1Q6NVV3 410 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 SLC2A7Q6PXP3 512 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 RIPOR1Q6ZS17 1223 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 CAMKMTQ7Z624 323 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 PLXDC1Q8IUK5 500 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 SFTPA2Q8IWL1 248 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 C10orf67Q8IYJ2 551 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 FBXW8Q8N3Y1 598 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 ZCCHC7Q8N3Z6 543 aaKnown RBP5.68□□□□□ -1.5
HMGB3-202ENST00000419110 MINDY1Q8N5J2 469 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 NATD1Q8N6N6 113 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 CSNK1A1LQ8N752 337 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 TRIML2Q8N7C3 387 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 TTC29Q8NA56 475 aaPredicted RBP5.68□□□□□ -1.5
HMGB3-202ENST00000419110 ZBTB44Q8NCP5 570 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 VPS37AQ8NEZ2 397 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 TNIP2Q8NFZ5 429 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 OR8J3Q8NGG0 315 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 OR8J2Q8NGG1 315 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 ZFP28Q8NHY6 868 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 WDR48Q8TAF3 677 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 FLVCR1-AS1Q8TAF5 88 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 CREB3L4Q8TEY5 395 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 C16orf78Q8WTQ4 265 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 GFM2Q969S9 779 aaKnown RBP5.68□□□□□ -1.5
HMGB3-202ENST00000419110 UTP4Q969X6 686 aaKnown RBP5.68□□□□□ -1.5
HMGB3-202ENST00000419110 ZUFSPQ96AP4 578 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 CCDC74AQ96AQ1 378 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 LRRC58Q96CX6 371 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 C11orf24Q96F05 449 aaPredicted RBP5.68□□□□□ -1.5
HMGB3-202ENST00000419110 RSRC1Q96IZ7 334 aaKnown RBP5.68□□□□□ -1.5
HMGB3-202ENST00000419110 LOXL4Q96JB6 756 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 TEX37Q96LM6 180 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 TGM7Q96PF1 710 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 GBP5Q96PP8 586 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 SH3GL1Q99961 368 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 HOPXQ9BPY8 73 aaPredicted RBP5.68□□□□□ -1.5
HMGB3-202ENST00000419110 SLC39A3Q9BRY0 314 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 TBCDQ9BTW9 1192 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 DUSP26Q9BV47 211 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 BHLHE41Q9C0J9 482 aaPredicted RBP5.68□□□□□ -1.5
HMGB3-202ENST00000419110 REEP4Q9H6H4 257 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 GAREM1Q9H706 876 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 SYNDIG1Q9H7V2 258 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 IL1RL2Q9HB29 575 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 FANCEQ9HB96 536 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 CAPN10Q9HC96 672 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 C1GALT1Q9NS00 363 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 ABCD2Q9UBJ2 740 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 EPHA6Q9UF33 1036 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 SLC7A8Q9UHI5 535 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 GMEB2Q9UKD1 530 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 SLC6A14Q9UN76 642 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 CORO2BQ9UQ03 480 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 MAN2B2Q9Y2E5 1009 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 PCDHGA5Q9Y5G8 931 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 RNF215Q9Y6U7 377 aa5.68□□□□□ -1.5
HMGB3-202ENST00000419110 COL27A1Q8IZC6 1860 aaPredicted RBP5.67□□□□□ -1.5
HMGB3-202ENST00000419110 IGHV1OR21-1A0A087WYE8 117 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 A0A0A6YYD5 115 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 A0A0G2JN53 185 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 LRIT2A6NDA9 550 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 A8MUI8 341 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 RTCAO00442 366 aaKnown RBP5.67□□□□□ -1.5
HMGB3-202ENST00000419110 RNASET2O00584 256 aaKnown RBP5.67□□□□□ -1.5
HMGB3-202ENST00000419110 PPM1DO15297 605 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 P2RX6O15547 441 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 B3GALT2O43825 422 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 GMNNO75496 209 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 ZBTB11O95625 1053 aaPredicted RBP5.67□□□□□ -1.5
HMGB3-202ENST00000419110 STATHP02808 62 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms