RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 GSK3BP49841 420 aa3.49□□□□□ -1.85
HMGB1P49-201ENST00000418882 KNOP1Q1ED39 458 aaKnown RBP3.49□□□□□ -1.85
HMGB1P49-201ENST00000418882 ZRANB3Q5FWF4 1079 aa3.49□□□□□ -1.85
HMGB1P49-201ENST00000418882 TEX35Q5T0J7 233 aa3.49□□□□□ -1.85
HMGB1P49-201ENST00000418882 C15orf52Q6ZUT6 534 aaKnown RBP3.49□□□□□ -1.85
HMGB1P49-201ENST00000418882 OR4N5Q8IXE1 308 aa3.49□□□□□ -1.85
HMGB1P49-201ENST00000418882 FBXL16Q8N461 479 aa3.49□□□□□ -1.85
HMGB1P49-201ENST00000418882 SMPDL3AQ92484 453 aa3.49□□□□□ -1.85
HMGB1P49-201ENST00000418882 MR1Q95460 341 aa3.49□□□□□ -1.85
HMGB1P49-201ENST00000418882 NABP1Q96AH0 204 aa3.49□□□□□ -1.85
HMGB1P49-201ENST00000418882 ZMAT2Q96NC0 199 aaKnown RBP3.49□□□□□ -1.85
HMGB1P49-201ENST00000418882 TAAR6Q96RI8 345 aa3.49□□□□□ -1.85
HMGB1P49-201ENST00000418882 ATF6BQ99941 703 aa3.49□□□□□ -1.85
HMGB1P49-201ENST00000418882 OCR1Q9BZK8 76 aa3.49□□□□□ -1.85
HMGB1P49-201ENST00000418882 GTSE1Q9NYZ3 720 aa3.49□□□□□ -1.85
HMGB1P49-201ENST00000418882 KIAA1217Q5T5P2 1943 aa3.48□□□□□ -1.85
HMGB1P49-201ENST00000418882 RNF123Q5XPI4 1314 aa3.48□□□□□ -1.85
HMGB1P49-201ENST00000418882 SERINC4A6NH21 518 aa3.48□□□□□ -1.85
HMGB1P49-201ENST00000418882 H0YIG0 161 aa3.48□□□□□ -1.85
HMGB1P49-201ENST00000418882 GALR3O60755 368 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P49-201ENST00000418882 NME6O75414 186 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P49-201ENST00000418882 ANGPTL1O95841 491 aa3.48□□□□□ -1.85
HMGB1P49-201ENST00000418882 CTNNA2P26232 953 aa3.48□□□□□ -1.85
HMGB1P49-201ENST00000418882 BACE1P56817 501 aa3.48□□□□□ -1.85
HMGB1P49-201ENST00000418882 ERVK-16P61578 105 aa3.48□□□□□ -1.85
HMGB1P49-201ENST00000418882 CNTN1Q12860 1018 aa3.48□□□□□ -1.85
HMGB1P49-201ENST00000418882 MAPK11Q15759 364 aa3.48□□□□□ -1.85
HMGB1P49-201ENST00000418882 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.48□□□□□ -1.85
HMGB1P49-201ENST00000418882 LCE3EQ5T5B0 92 aa3.48□□□□□ -1.85
HMGB1P49-201ENST00000418882 PODNL1Q6PEZ8 512 aa3.48□□□□□ -1.85
HMGB1P49-201ENST00000418882 REG3GQ6UW15 175 aa3.48□□□□□ -1.85
HMGB1P49-201ENST00000418882 MACC1Q6ZN28 852 aa3.48□□□□□ -1.85
HMGB1P49-201ENST00000418882 Q71RC1 249 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P49-201ENST00000418882 MCM10Q7L590 875 aa3.48□□□□□ -1.85
HMGB1P49-201ENST00000418882 METTL23Q86XA0 190 aa3.48□□□□□ -1.85
HMGB1P49-201ENST00000418882 RNF130Q86XS8 419 aa3.48□□□□□ -1.85
HMGB1P49-201ENST00000418882 RTL3Q8N8U3 475 aaKnown RBP3.48□□□□□ -1.85
HMGB1P49-201ENST00000418882 SMYD1Q8NB12 490 aa3.48□□□□□ -1.85
HMGB1P49-201ENST00000418882 DNASE1L2Q92874 299 aa3.48□□□□□ -1.85
HMGB1P49-201ENST00000418882 C1orf147Q96MC9 270 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P49-201ENST00000418882 GBP5Q96PP8 586 aa3.48□□□□□ -1.85
HMGB1P49-201ENST00000418882 RPP25Q9BUL9 199 aaKnown RBP3.48□□□□□ -1.85
HMGB1P49-201ENST00000418882 SLC39A8Q9C0K1 460 aa3.48□□□□□ -1.85
HMGB1P49-201ENST00000418882 JPT2Q9H910 190 aa3.48□□□□□ -1.85
HMGB1P49-201ENST00000418882 DBF4Q9UBU7 674 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P49-201ENST00000418882 RARRES3Q9UL19 164 aa3.48□□□□□ -1.85
HMGB1P49-201ENST00000418882 ZNF346Q9UL40 294 aaKnown RBP3.48□□□□□ -1.85
HMGB1P49-201ENST00000418882 TRBV5-4A0A0C4DH59 114 aa3.47□□□□□ -1.85
HMGB1P49-201ENST00000418882 CCER2I3L3R5 266 aa3.47□□□□□ -1.85
HMGB1P49-201ENST00000418882 CTDSPLO15194 276 aa3.47□□□□□ -1.85
HMGB1P49-201ENST00000418882 OR6B1O95007 311 aa3.47□□□□□ -1.85
HMGB1P49-201ENST00000418882 RLN1P04808 185 aa3.47□□□□□ -1.85
HMGB1P49-201ENST00000418882 CD1DP15813 335 aa3.47□□□□□ -1.85
HMGB1P49-201ENST00000418882 PIK3R1P27986 724 aa3.47□□□□□ -1.85
HMGB1P49-201ENST00000418882 PTGER3P43115 390 aa3.47□□□□□ -1.85
HMGB1P49-201ENST00000418882 OR3A3P47888 321 aa3.47□□□□□ -1.85
HMGB1P49-201ENST00000418882 ZFP36L2P47974 494 aaKnown RBP3.47□□□□□ -1.85
HMGB1P49-201ENST00000418882 PPA1Q15181 289 aa3.47□□□□□ -1.85
HMGB1P49-201ENST00000418882 EIPR1Q53HC9 387 aa3.47□□□□□ -1.85
HMGB1P49-201ENST00000418882 PM20D1Q6GTS8 502 aa3.47□□□□□ -1.85
HMGB1P49-201ENST00000418882 TCEAL6Q6IPX3 200 aa3.47□□□□□ -1.85
HMGB1P49-201ENST00000418882 SLC27A4Q6P1M0 643 aa3.47□□□□□ -1.85
HMGB1P49-201ENST00000418882 NHLRC1Q6VVB1 395 aa3.47□□□□□ -1.85
HMGB1P49-201ENST00000418882 VSIG1Q86XK7 387 aa3.47□□□□□ -1.85
HMGB1P49-201ENST00000418882 DZIP1Q86YF9 867 aaKnown RBP3.47□□□□□ -1.85
HMGB1P49-201ENST00000418882 OR4Q3Q8NH05 313 aa3.47□□□□□ -1.85
HMGB1P49-201ENST00000418882 SLC35C1Q96A29 364 aa3.47□□□□□ -1.85
HMGB1P49-201ENST00000418882 MRPL17Q9NRX2 175 aaKnown RBP3.47□□□□□ -1.85
HMGB1P49-201ENST00000418882 PRR34Q9NV39 138 aa3.47□□□□□ -1.85
HMGB1P49-201ENST00000418882 DNAJB9Q9UBS3 223 aa3.47□□□□□ -1.85
HMGB1P49-201ENST00000418882 GMEB2Q9UKD1 530 aa3.47□□□□□ -1.85
HMGB1P49-201ENST00000418882 TMED7Q9Y3B3 224 aa3.47□□□□□ -1.85
HMGB1P49-201ENST00000418882 SALL1Q9NSC2 1324 aa3.46□□□□□ -1.85
HMGB1P49-201ENST00000418882 IGHV3-16A0A0C4DH30 117 aa3.46□□□□□ -1.86
HMGB1P49-201ENST00000418882 RPL37AP8A6NKH3 93 aa3.46□□□□□ -1.86
HMGB1P49-201ENST00000418882 YDJCA8MPS7 323 aa3.46□□□□□ -1.86
HMGB1P49-201ENST00000418882 P2RX6O15547 441 aa3.46□□□□□ -1.86
HMGB1P49-201ENST00000418882 MELTFP08582 738 aa3.46□□□□□ -1.86
HMGB1P49-201ENST00000418882 ADORA3P0DMS8 318 aa3.46□□□□□ -1.86
HMGB1P49-201ENST00000418882 GJB2P29033 226 aa3.46□□□□□ -1.86
HMGB1P49-201ENST00000418882 NOVP48745 357 aa3.46□□□□□ -1.86
HMGB1P49-201ENST00000418882 FKBP1BP68106 108 aa3.46□□□□□ -1.86
HMGB1P49-201ENST00000418882 RPP38P78345 283 aaKnown RBP3.46□□□□□ -1.86
HMGB1P49-201ENST00000418882 SRPXP78539 464 aa3.46□□□□□ -1.86
HMGB1P49-201ENST00000418882 ABRQ12979 859 aa3.46□□□□□ -1.86
HMGB1P49-201ENST00000418882 GPR50Q13585 617 aa3.46□□□□□ -1.86
HMGB1P49-201ENST00000418882 ARMCX4Q5H9R4 360 aa3.46□□□□□ -1.86
HMGB1P49-201ENST00000418882 SLC25A30Q5SVS4 291 aa3.46□□□□□ -1.86
HMGB1P49-201ENST00000418882 C9orf66Q5T8R8 295 aa3.46□□□□□ -1.86
HMGB1P49-201ENST00000418882 NEPROQ6NW34 567 aa3.46□□□□□ -1.86
HMGB1P49-201ENST00000418882 CEACAM19Q7Z692 300 aa3.46□□□□□ -1.86
HMGB1P49-201ENST00000418882 RPAINQ86UA6 219 aa3.46□□□□□ -1.86
HMGB1P49-201ENST00000418882 ANKRD46Q86W74 232 aa3.46□□□□□ -1.86
HMGB1P49-201ENST00000418882 SLC39A11Q8N1S5 342 aa3.46□□□□□ -1.86
HMGB1P49-201ENST00000418882 SLC43A2Q8N370 569 aa3.46□□□□□ -1.86
HMGB1P49-201ENST00000418882 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P49-201ENST00000418882 TOMM40LQ969M1 308 aa3.46□□□□□ -1.86
HMGB1P49-201ENST00000418882 BPIFA2Q96DR5 249 aa3.46□□□□□ -1.86
HMGB1P49-201ENST00000418882 ERO1AQ96HE7 468 aa3.46□□□□□ -1.86
HMGB1P49-201ENST00000418882 ATG101Q9BSB4 218 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms