RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 APOA4P06727 396 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 ANXA6P08133 673 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 SRPRAP08240 638 aaKnown RBP3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 GSTA1P08263 222 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 F7P08709 466 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 TBC1D3HP0C7X1 549 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 TROVE2P10155 538 aaKnown RBP eCLIP3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 ARSAP15289 507 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 SP100P23497 879 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 GDI1P31150 447 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 ARRB2P32121 409 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 PPARGP37231 505 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 CSNK1DP48730 415 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 NEK3P51956 506 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 ZNF140P52738 457 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 RAB10P61026 200 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 IRX4P78413 519 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 ASPHQ12797 758 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 KCNC3Q14003 757 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 E2F5Q15329 346 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 DLG2Q15700 870 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 PDK4Q16654 411 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 ZSCAN26Q16670 478 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 MPEG1Q2M385 716 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 CCDC153Q494R4 210 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 CARD16Q5EG05 197 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 ZRANB3Q5FWF4 1079 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 FAM78AQ5JUQ0 283 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 DGKKQ5KSL6 1271 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 WASHC2DQ5SRD0 308 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 N4BP2L1Q5TBK1 243 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 ATG16L1Q676U5 607 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 TBC1D3GQ6DHY5 549 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 TBC1D3CQ6IPX1 549 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 LRRC8EQ6NSJ5 796 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 NEPROQ6NW34 567 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 KLC3Q6P597 504 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 VITQ6UXI7 678 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 TIFABQ6ZNK6 161 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 FAM47EQ6ZV65 393 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 CMC1Q7Z7K0 106 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 TBC1D1Q86TI0 1168 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 ZC3HC1Q86WB0 502 aaKnown RBP3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 DENND6AQ8IWF6 608 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 CNTN4Q8IWV2 1026 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 LRRC34Q8IZ02 419 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 ADGRF3Q8IZF5 1079 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 TBC1D3Q8IZP1 549 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 BANPQ8N9N5 519 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 CCDC197Q8NCU1 140 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 OR4K2Q8NGD2 314 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 OR13C4Q8NGS5 318 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 OR13J1Q8NGT2 312 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 OR4L1Q8NH43 312 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 CSGALNACT1Q8TDX6 532 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 WDR60Q8WVS4 1066 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 CKAP2Q8WWK9 683 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 KAT2AQ92830 837 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 ISG20Q96AZ6 181 aaKnown RBP3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 TBATAQ96M53 351 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 TRIB3Q96RU7 358 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 CCT8L2Q96SF2 557 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 NDNQ99608 321 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 PRPF18Q99633 342 aaKnown RBP3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 GPR22Q99680 433 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 KXD1Q9BQD3 176 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 PLAC1Q9HBJ0 212 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 BPIFA1Q9NP55 256 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 NECTIN3Q9NQS3 549 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 DYRK4Q9NR20 520 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 FGFR1OP2Q9NVK5 253 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 INTS10Q9NVR2 710 aaKnown RBP3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 NLE1Q9NVX2 485 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 GDE1Q9NZC3 331 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 PKD2L2Q9NZM6 624 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 SLC17A7Q9P2U7 560 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 DEC1Q9P2X7 70 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 IL36AQ9UHA7 158 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 DCDC2Q9UHG0 476 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 FBXO4Q9UKT5 387 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 INTS6Q9UL03 887 aaKnown RBP3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 GRID1Q9ULK0 1009 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 CORO1CQ9ULV4 474 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 CLEC4EQ9ULY5 219 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 PHTF1Q9UMS5 762 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 SLC12A4Q9UP95 1085 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 DNAH12Q6ZR08 3092 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 TCF20Q9UGU0 1960 aaKnown RBP3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 A0A0J9YYE9 177 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 PRR23D1E9PI22 279 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 KPNA3O00505 521 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 TPD52L2O43399 206 aaKnown RBP3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 SLC28A2O43868 658 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 VPS26AO75436 327 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 SRP72O76094 671 aaKnown RBP3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 RHOBTB1O94844 696 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 POP4O95707 220 aaKnown RBP3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 IFNA2P01563 188 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 TRBC1P01850 177 aa3.69□□□□□ -1.82
HMGB3P20-201ENST00000417997 C2P06681 752 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms