RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 C16orf96A6NNT2 1141 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 RHPN2P1A8MT19 583 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 A8MVJ9 347 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 H0YJX3 145 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 F2RL2O00254 374 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 CCL21O00585 134 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 RASGRF2O14827 1237 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 RAD51BO15315 384 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 PHF1O43189 567 aaPredicted RBP5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 ZBTB43O43298 467 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 PSIP1O75475 530 aaKnown RBP5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 HEXIM1O94992 359 aaKnown RBP5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 SNX4O95219 450 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 CLDN14O95500 239 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 NPPAP01160 153 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 KLKB1P03952 638 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 ALPIP09923 528 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 KITP10721 976 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 ICAM2P13598 275 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 ATP1A3P13637 1013 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 GYPEP15421 78 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 CHN1P15882 459 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 CORO1AP31146 461 aaKnown RBP5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 CTNNA1P35221 906 aaKnown RBP5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 PTPN7P35236 360 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 RFC1P35251 1148 aaPredicted RBP5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 SPAM1P38567 509 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 GARSP41250 739 aaKnown RBP5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 CDK16Q00536 496 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 DUSP2Q05923 314 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 NAB1Q13506 487 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 ARHGEF7Q14155 803 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 ELOCQ15369 112 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 OASLQ15646 514 aaKnown RBP5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 MEA1Q16626 185 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 SMU1Q2TAY7 513 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 TRIM16LQ309B1 348 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 GRAMD1BQ3KR37 738 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 ADCK5Q3MIX3 580 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 RILPL1Q5EBL4 403 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 MDH1BQ5I0G3 518 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 EARS2Q5JPH6 523 aaKnown RBP5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 KRBOX4Q5JUW0 171 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 C6orf163Q5TEZ5 329 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 LYPLAL1Q5VWZ2 237 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 FAM180BQ6P0A1 224 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 SYDE1Q6ZW31 735 aaPredicted RBP5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 FAM90A1Q86YD7 464 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 P3H2Q8IVL5 708 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 KBTBD2Q8IY47 623 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 RCOR2Q8IZ40 523 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 STK40Q8N2I9 435 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 CPXM2Q8N436 756 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 KLHL36Q8N4N3 616 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 FITM2Q8N6M3 262 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 BMPERQ8N8U9 685 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 KDM1BQ8NB78 822 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 ZFP28Q8NHY6 868 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 SCAMP5Q8TAC9 235 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 GRK7Q8WTQ7 553 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 SLC44A1Q8WWI5 657 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 IPCEF1Q8WWN9 437 aaPredicted RBP5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 NCLNQ969V3 563 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 TAMM41Q96BW9 452 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 APOPT1Q96IL0 206 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 GPHA2Q96T91 129 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 LRRC1Q9BTT6 524 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 SLC6A15Q9H2J7 730 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 CUEDC2Q9H467 287 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 POLD4Q9HCU8 107 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 TIGARQ9NQ88 270 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 TLR8Q9NR97 1041 aaKnown RBP5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 IARS2Q9NSE4 1012 aaKnown RBP5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 ABHD10Q9NUJ1 306 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 TMEM140Q9NV12 185 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 TMEM30AQ9NV96 361 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 OCIAD1Q9NX40 245 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 GPR83Q9NYM4 423 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 TAS2R1Q9NYW7 299 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 VPS54Q9P1Q0 977 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 HECAQ9UBI9 543 aaPredicted RBP5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 STOML2Q9UJZ1 356 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 PTBP2Q9UKA9 531 aaKnown RBP5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 CNOT6Q9ULM6 557 aaKnown RBP5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 RAB26Q9ULW5 256 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 CORO2BQ9UQ03 480 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 CBY1Q9Y3M2 126 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 DMRT1Q9Y5R6 373 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 HS3ST3A1Q9Y663 406 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 CEPT1Q9Y6K0 416 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 PCM1Q15154 2024 aa5.26□□□□□ -1.57
ECHDC1-206ENST00000417628 POLEQ07864 2286 aa5.26□□□□□ -1.57
ECHDC1-206ENST00000417628 TRGV8A0A0C4DH27 118 aa5.26□□□□□ -1.57
ECHDC1-206ENST00000417628 A0A0U1RQJ8 604 aa5.26□□□□□ -1.57
ECHDC1-206ENST00000417628 A0A1W2PPL8 197 aa5.26□□□□□ -1.57
ECHDC1-206ENST00000417628 LOC390937A0A1W2PQ73 354 aa5.26□□□□□ -1.57
ECHDC1-206ENST00000417628 CCDC188H7C350 402 aa5.26□□□□□ -1.57
ECHDC1-206ENST00000417628 EEF2KO00418 725 aaKnown RBP5.26□□□□□ -1.57
ECHDC1-206ENST00000417628 TOR1AO14656 332 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms