RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 ASMTP46597 345 aa13.53□□□□□ -0.24
SF3B1-204ENST00000414963 MTTPP55157 894 aa13.53□□□□□ -0.24
SF3B1-204ENST00000414963 RAB8AP61006 207 aa13.53□□□□□ -0.24
SF3B1-204ENST00000414963 STX1BP61266 288 aa13.53□□□□□ -0.24
SF3B1-204ENST00000414963 BTN3A2P78410 334 aa13.53□□□□□ -0.24
SF3B1-204ENST00000414963 MC2RQ01718 297 aa13.53□□□□□ -0.24
SF3B1-204ENST00000414963 KLF10Q13118 480 aa13.53□□□□□ -0.24
SF3B1-204ENST00000414963 UBAP2LQ14157 1087 aaKnown RBP13.53□□□□□ -0.24
SF3B1-204ENST00000414963 IL11RAQ14626 422 aa13.53□□□□□ -0.24
SF3B1-204ENST00000414963 ISXQ2M1V0 245 aa13.53□□□□□ -0.24
SF3B1-204ENST00000414963 CCNYL2Q5T2Q4 361 aa13.53□□□□□ -0.24
SF3B1-204ENST00000414963 ZNF793Q6ZN11 406 aa13.53□□□□□ -0.24
SF3B1-204ENST00000414963 DGLUCYQ7Z3D6 616 aa13.53□□□□□ -0.24
SF3B1-204ENST00000414963 KIAA2013Q8IYS2 634 aa13.53□□□□□ -0.24
SF3B1-204ENST00000414963 GPR135Q8IZ08 494 aa13.53□□□□□ -0.24
SF3B1-204ENST00000414963 MARK4Q96L34 752 aa13.53□□□□□ -0.24
SF3B1-204ENST00000414963 C10orf90Q96M02 699 aa13.53□□□□□ -0.24
SF3B1-204ENST00000414963 SORBS1Q9BX66 1292 aaKnown RBP13.53□□□□□ -0.24
SF3B1-204ENST00000414963 NPLQ9BXD5 320 aaPredicted RBP13.53□□□□□ -0.24
SF3B1-204ENST00000414963 STRADBQ9C0K7 418 aa13.53□□□□□ -0.24
SF3B1-204ENST00000414963 MYNNQ9NPC7 610 aa13.53□□□□□ -0.24
SF3B1-204ENST00000414963 FBXO8Q9NRD0 319 aa13.53□□□□□ -0.24
SF3B1-204ENST00000414963 STARD5Q9NSY2 213 aa13.53□□□□□ -0.24
SF3B1-204ENST00000414963 G3BP2Q9UN86 482 aaKnown RBP13.53□□□□□ -0.24
SF3B1-204ENST00000414963 MAPRE3Q9UPY8 281 aa13.53□□□□□ -0.24
SF3B1-204ENST00000414963 MRPS2Q9Y399 296 aaKnown RBP13.53□□□□□ -0.24
SF3B1-204ENST00000414963 COL27A1Q8IZC6 1860 aaPredicted RBP13.53□□□□□ -0.24
SF3B1-204ENST00000414963 GNG14A0A1W2PPG7 69 aa13.52□□□□□ -0.25
SF3B1-204ENST00000414963 ARHGAP10A1A4S6 786 aa13.52□□□□□ -0.25
SF3B1-204ENST00000414963 TMPRSS11DO60235 418 aa13.52□□□□□ -0.25
SF3B1-204ENST00000414963 SLC22A3O75751 556 aa13.52□□□□□ -0.25
SF3B1-204ENST00000414963 MT-CO3P00414 261 aa13.52□□□□□ -0.25
SF3B1-204ENST00000414963 FGF5P12034 268 aa13.52□□□□□ -0.25
SF3B1-204ENST00000414963 PRPS1L1P21108 318 aa13.52□□□□□ -0.25
SF3B1-204ENST00000414963 MAPK12P53778 367 aa13.52□□□□□ -0.25
SF3B1-204ENST00000414963 ARSFP54793 590 aa13.52□□□□□ -0.25
SF3B1-204ENST00000414963 UFM1P61960 85 aa13.52□□□□□ -0.25
SF3B1-204ENST00000414963 SNRPNP63162 240 aaKnown RBP13.52□□□□□ -0.25
SF3B1-204ENST00000414963 SKP1P63208 163 aa13.52□□□□□ -0.25
SF3B1-204ENST00000414963 ZNF763Q0D2J5 394 aa13.52□□□□□ -0.25
SF3B1-204ENST00000414963 PTGR1Q14914 329 aa13.52□□□□□ -0.25
SF3B1-204ENST00000414963 SLC9A5Q14940 896 aa13.52□□□□□ -0.25
SF3B1-204ENST00000414963 KRT72Q14CN4 511 aa13.52□□□□□ -0.25
SF3B1-204ENST00000414963 MUM1Q2TAK8 710 aa13.52□□□□□ -0.25
SF3B1-204ENST00000414963 DEFB134Q4QY38 66 aa13.52□□□□□ -0.25
SF3B1-204ENST00000414963 IKBIPQ70UQ0 350 aa13.52□□□□□ -0.25
SF3B1-204ENST00000414963 RIMKLAQ8IXN7 391 aa13.52□□□□□ -0.25
SF3B1-204ENST00000414963 AMER3Q8N944 861 aa13.52□□□□□ -0.25
SF3B1-204ENST00000414963 TTC29Q8NA56 475 aaPredicted RBP13.52□□□□□ -0.25
SF3B1-204ENST00000414963 GLB1L3Q8NCI6 653 aaPredicted RBP13.52□□□□□ -0.25
SF3B1-204ENST00000414963 PROKR1Q8TCW9 393 aa13.52□□□□□ -0.25
SF3B1-204ENST00000414963 C16orf78Q8WTQ4 265 aa13.52□□□□□ -0.25
SF3B1-204ENST00000414963 TSPEARQ8WU66 669 aa13.52□□□□□ -0.25
SF3B1-204ENST00000414963 TM4SF18Q96CE8 201 aa13.52□□□□□ -0.25
SF3B1-204ENST00000414963 ERP27Q96DN0 273 aa13.52□□□□□ -0.25
SF3B1-204ENST00000414963 MVB12AQ96EY5 273 aa13.52□□□□□ -0.25
SF3B1-204ENST00000414963 LIN37Q96GY3 246 aaPredicted RBP13.52□□□□□ -0.25
SF3B1-204ENST00000414963 DEPDC7Q96QD5 511 aa13.52□□□□□ -0.25
SF3B1-204ENST00000414963 OR6C1Q96RD1 312 aa13.52□□□□□ -0.25
SF3B1-204ENST00000414963 CMKLR1Q99788 373 aa13.52□□□□□ -0.25
SF3B1-204ENST00000414963 OCIAD1Q9NX40 245 aa13.52□□□□□ -0.25
SF3B1-204ENST00000414963 AKAP7Q9P0M2 348 aaPredicted RBP13.52□□□□□ -0.25
SF3B1-204ENST00000414963 ARMCX1Q9P291 453 aa13.52□□□□□ -0.25
SF3B1-204ENST00000414963 BAIAP2L1Q9UHR4 511 aa13.52□□□□□ -0.25
SF3B1-204ENST00000414963 RAPGEFL1Q9UHV5 662 aa13.52□□□□□ -0.25
SF3B1-204ENST00000414963 RARRES3Q9UL19 164 aa13.52□□□□□ -0.25
SF3B1-204ENST00000414963 ASB4Q9Y574 426 aa13.52□□□□□ -0.25
SF3B1-204ENST00000414963 CAPN7Q9Y6W3 813 aa13.52□□□□□ -0.25
SF3B1-204ENST00000414963 ZNF749O43361 778 aa13.51□□□□□ -0.25
SF3B1-204ENST00000414963 FOXS1O43638 330 aa13.51□□□□□ -0.25
SF3B1-204ENST00000414963 B3GALT2O43825 422 aa13.51□□□□□ -0.25
SF3B1-204ENST00000414963 GUCY1B2O75343 617 aa13.51□□□□□ -0.25
SF3B1-204ENST00000414963 MED26O95402 600 aa13.51□□□□□ -0.25
SF3B1-204ENST00000414963 NSA2O95478 260 aaKnown RBP13.51□□□□□ -0.25
SF3B1-204ENST00000414963 GBAP04062 536 aa13.51□□□□□ -0.25
SF3B1-204ENST00000414963 FAM58BPP0C7Q3 252 aa13.51□□□□□ -0.25
SF3B1-204ENST00000414963 FTH1P19P0C7X4 201 aa13.51□□□□□ -0.25
SF3B1-204ENST00000414963 PIK3R1P27986 724 aa13.51□□□□□ -0.25
SF3B1-204ENST00000414963 PRDX6P30041 224 aa13.51□□□□□ -0.25
SF3B1-204ENST00000414963 SLAMF1Q13291 335 aa13.51□□□□□ -0.25
SF3B1-204ENST00000414963 CCDC157Q569K6 752 aa13.51□□□□□ -0.25
SF3B1-204ENST00000414963 FAM71E1Q6IPT2 247 aa13.51□□□□□ -0.25
SF3B1-204ENST00000414963 DHRS13Q6UX07 377 aa13.51□□□□□ -0.25
SF3B1-204ENST00000414963 PDSS2Q86YH6 399 aa13.51□□□□□ -0.25
SF3B1-204ENST00000414963 TREML1Q86YW5 311 aa13.51□□□□□ -0.25
SF3B1-204ENST00000414963 FUNDC1Q8IVP5 155 aa13.51□□□□□ -0.25
SF3B1-204ENST00000414963 ZCCHC10Q8TBK6 192 aa13.51□□□□□ -0.25
SF3B1-204ENST00000414963 STARD8Q92502 1023 aa13.51□□□□□ -0.25
SF3B1-204ENST00000414963 TESCQ96BS2 214 aa13.51□□□□□ -0.25
SF3B1-204ENST00000414963 ZNF764Q96H86 408 aaPredicted RBP13.51□□□□□ -0.25
SF3B1-204ENST00000414963 EGLN2Q96KS0 407 aa13.51□□□□□ -0.25
SF3B1-204ENST00000414963 TEX37Q96LM6 180 aa13.51□□□□□ -0.25
SF3B1-204ENST00000414963 EBPLQ9BY08 206 aa13.51□□□□□ -0.25
SF3B1-204ENST00000414963 COPS7BQ9H9Q2 264 aaPredicted RBP13.51□□□□□ -0.25
SF3B1-204ENST00000414963 ANKHQ9HCJ1 492 aa13.51□□□□□ -0.25
SF3B1-204ENST00000414963 LYRM4Q9HD34 91 aa13.51□□□□□ -0.25
SF3B1-204ENST00000414963 PRDM9Q9NQV7 894 aa13.51□□□□□ -0.25
SF3B1-204ENST00000414963 CUTCQ9NTM9 273 aa13.51□□□□□ -0.25
SF3B1-204ENST00000414963 LYARQ9NX58 379 aaKnown RBP13.51□□□□□ -0.25
SF3B1-204ENST00000414963 KCMF1Q9P0J7 381 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms