RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 C8BP07358 591 aa16.64■□□□□ 0.26
PHRF1-202ENST00000413872 GRM7Q14831 915 aa16.64■□□□□ 0.26
PHRF1-202ENST00000413872 NPTX1Q15818 432 aa16.64■□□□□ 0.26
PHRF1-202ENST00000413872 CPNE2Q96FN4 548 aaPredicted RBP16.64■□□□□ 0.26
PHRF1-202ENST00000413872 ARHGAP9Q9BRR9 750 aa16.64■□□□□ 0.26
PHRF1-202ENST00000413872 CHMP1AQ9HD42 196 aaPredicted RBP16.64■□□□□ 0.26
PHRF1-202ENST00000413872 NOX1Q9Y5S8 564 aa16.64■□□□□ 0.26
PHRF1-202ENST00000413872 PDE4DIPQ5VU43 2346 aa16.64■□□□□ 0.25
PHRF1-202ENST00000413872 CBFA2T3O75081 653 aa16.64■□□□□ 0.25
PHRF1-202ENST00000413872 MAP3K8P41279 467 aa16.64■□□□□ 0.25
PHRF1-202ENST00000413872 DPP6P42658 865 aa16.64■□□□□ 0.25
PHRF1-202ENST00000413872 SCN1BQ07699 218 aa16.64■□□□□ 0.25
PHRF1-202ENST00000413872 CYBRD1Q53TN4 286 aa16.64■□□□□ 0.25
PHRF1-202ENST00000413872 FAM26DQ5JW98 314 aa16.64■□□□□ 0.25
PHRF1-202ENST00000413872 OR9I1Q8NGQ6 314 aa16.64■□□□□ 0.25
PHRF1-202ENST00000413872 ALPK1Q96QP1 1244 aa16.64■□□□□ 0.25
PHRF1-202ENST00000413872 MARCH4Q9P2E8 410 aaPredicted RBP16.64■□□□□ 0.25
PHRF1-202ENST00000413872 OAZ3Q9UMX2 235 aa16.64■□□□□ 0.25
PHRF1-202ENST00000413872 MYH11P35749 1972 aa16.64■□□□□ 0.25
PHRF1-202ENST00000413872 FAM189A1O60320 539 aa16.64■□□□□ 0.25
PHRF1-202ENST00000413872 HSD11B1P28845 292 aa16.64■□□□□ 0.25
PHRF1-202ENST00000413872 ZC3H14Q6PJT7 736 aaKnown RBP16.64■□□□□ 0.25
PHRF1-202ENST00000413872 RBM12BQ8IXT5 1001 aaKnown RBP16.64■□□□□ 0.25
PHRF1-202ENST00000413872 OR5L2Q8NGL0 311 aa16.64■□□□□ 0.25
PHRF1-202ENST00000413872 OR6N1Q8NGY5 312 aa16.64■□□□□ 0.25
PHRF1-202ENST00000413872 WASF2Q9Y6W5 498 aa16.64■□□□□ 0.25
PHRF1-202ENST00000413872 ZNF670-ZNF695F2Z2N8 137 aa16.64■□□□□ 0.25
PHRF1-202ENST00000413872 BCAS2O75934 225 aaPredicted RBP16.64■□□□□ 0.25
PHRF1-202ENST00000413872 IL18R1Q13478 541 aa16.64■□□□□ 0.25
PHRF1-202ENST00000413872 SMU1Q2TAY7 513 aa16.64■□□□□ 0.25
PHRF1-202ENST00000413872 CLEC12AQ5QGZ9 265 aa16.64■□□□□ 0.25
PHRF1-202ENST00000413872 TP53INP1Q96A56 240 aa16.64■□□□□ 0.25
PHRF1-202ENST00000413872 COQ8BQ96D53 544 aa16.64■□□□□ 0.25
PHRF1-202ENST00000413872 PGAP2Q9UHJ9 254 aa16.64■□□□□ 0.25
PHRF1-202ENST00000413872 ENTPD2Q9Y5L3 495 aa16.64■□□□□ 0.25
PHRF1-202ENST00000413872 DNMT3AQ9Y6K1 912 aaPredicted RBP16.64■□□□□ 0.25
PHRF1-202ENST00000413872 ARHGEF15O94989 841 aa16.63■□□□□ 0.25
PHRF1-202ENST00000413872 PITPNAQ00169 270 aa16.63■□□□□ 0.25
PHRF1-202ENST00000413872 ROR2Q01974 943 aaKnown RBP16.63■□□□□ 0.25
PHRF1-202ENST00000413872 KCTD8Q6ZWB6 473 aa16.63■□□□□ 0.25
PHRF1-202ENST00000413872 IL22RA1Q8N6P7 574 aa16.63■□□□□ 0.25
PHRF1-202ENST00000413872 CMKLR1Q99788 373 aa16.63■□□□□ 0.25
PHRF1-202ENST00000413872 CPEB1Q9BZB8 566 aaKnown RBP16.63■□□□□ 0.25
PHRF1-202ENST00000413872 EPHA6Q9UF33 1036 aa16.63■□□□□ 0.25
PHRF1-202ENST00000413872 GPR89AB7ZAQ6 455 aa16.63■□□□□ 0.25
PHRF1-202ENST00000413872 PRAMEF26H0Y7S4 382 aa16.63■□□□□ 0.25
PHRF1-202ENST00000413872 PSIP1O75475 530 aaKnown RBP16.63■□□□□ 0.25
PHRF1-202ENST00000413872 PDYNP01213 254 aa16.63■□□□□ 0.25
PHRF1-202ENST00000413872 GPR89BP0CG08 455 aa16.63■□□□□ 0.25
PHRF1-202ENST00000413872 DOC2AQ14183 400 aa16.63■□□□□ 0.25
PHRF1-202ENST00000413872 FLYWCH1Q4VC44 716 aa16.63■□□□□ 0.25
PHRF1-202ENST00000413872 UNC50Q53HI1 259 aa16.63■□□□□ 0.25
PHRF1-202ENST00000413872 RASSF6Q6ZTQ3 369 aa16.63■□□□□ 0.25
PHRF1-202ENST00000413872 PHTF2Q8N3S3 785 aa16.63■□□□□ 0.25
PHRF1-202ENST00000413872 SLC39A3Q9BRY0 314 aa16.63■□□□□ 0.25
PHRF1-202ENST00000413872 EBF2Q9HAK2 575 aa16.63■□□□□ 0.25
PHRF1-202ENST00000413872 PAK6Q9NQU5 681 aaPredicted RBP16.63■□□□□ 0.25
PHRF1-202ENST00000413872 B4GALT7Q9UBV7 327 aa16.63■□□□□ 0.25
PHRF1-202ENST00000413872 HCN4Q9Y3Q4 1203 aa16.63■□□□□ 0.25
PHRF1-202ENST00000413872 EME2A4GXA9 379 aaPredicted RBP16.63■□□□□ 0.25
PHRF1-202ENST00000413872 MUSKO15146 869 aa16.63■□□□□ 0.25
PHRF1-202ENST00000413872 GSTT2BP0CG30 244 aa16.63■□□□□ 0.25
PHRF1-202ENST00000413872 CEBPBP17676 345 aa16.63■□□□□ 0.25
PHRF1-202ENST00000413872 GGT5P36269 586 aa16.63■□□□□ 0.25
PHRF1-202ENST00000413872 SLAMF1Q13291 335 aa16.63■□□□□ 0.25
PHRF1-202ENST00000413872 ZNF648Q5T619 568 aaPredicted RBP16.63■□□□□ 0.25
PHRF1-202ENST00000413872 GPALPP1Q8IXQ4 340 aa16.63■□□□□ 0.25
PHRF1-202ENST00000413872 LRRC25Q8N386 305 aaPredicted RBP16.63■□□□□ 0.25
PHRF1-202ENST00000413872 CHST14Q8NCH0 376 aa16.63■□□□□ 0.25
PHRF1-202ENST00000413872 OSTF1Q92882 214 aa16.63■□□□□ 0.25
PHRF1-202ENST00000413872 BIRC7Q96CA5 298 aa16.63■□□□□ 0.25
PHRF1-202ENST00000413872 ZNF395Q9H8N7 513 aaPredicted RBP16.63■□□□□ 0.25
PHRF1-202ENST00000413872 ANKRA2Q9H9E1 313 aa16.63■□□□□ 0.25
PHRF1-202ENST00000413872 CENPMQ9NSP4 180 aa16.63■□□□□ 0.25
PHRF1-202ENST00000413872 MYH3P11055 1940 aa16.63■□□□□ 0.25
PHRF1-202ENST00000413872 HHEXQ03014 270 aa16.63■□□□□ 0.25
PHRF1-202ENST00000413872 GBX1Q14549 363 aa16.63■□□□□ 0.25
PHRF1-202ENST00000413872 PCBP2Q15366 365 aaKnown RBP eCLIP16.63■□□□□ 0.25
PHRF1-202ENST00000413872 FAM182AQ5T1J6 154 aa16.63■□□□□ 0.25
PHRF1-202ENST00000413872 USP43Q70EL4 1123 aa16.63■□□□□ 0.25
PHRF1-202ENST00000413872 DCP2Q8IU60 420 aaKnown RBP16.63■□□□□ 0.25
PHRF1-202ENST00000413872 OR4K1Q8NGD4 311 aa16.63■□□□□ 0.25
PHRF1-202ENST00000413872 MCHR1Q99705 422 aa16.63■□□□□ 0.25
PHRF1-202ENST00000413872 IFT46Q9NQC8 304 aa16.63■□□□□ 0.25
PHRF1-202ENST00000413872 CLEC4AQ9UMR7 237 aa16.63■□□□□ 0.25
PHRF1-202ENST00000413872 PCDHGB2Q9Y5G2 931 aa16.63■□□□□ 0.25
PHRF1-202ENST00000413872 KHNYNO15037 678 aaKnown RBP16.63■□□□□ 0.25
PHRF1-202ENST00000413872 ZNF208O43345 1280 aa16.63■□□□□ 0.25
PHRF1-202ENST00000413872 IL3P08700 152 aa16.63■□□□□ 0.25
PHRF1-202ENST00000413872 CSNK1DP48730 415 aa16.63■□□□□ 0.25
PHRF1-202ENST00000413872 DEFB134Q4QY38 66 aa16.63■□□□□ 0.25
PHRF1-202ENST00000413872 SWT1Q5T5J6 900 aaKnown RBP16.63■□□□□ 0.25
PHRF1-202ENST00000413872 RNF111Q6ZNA4 994 aa16.63■□□□□ 0.25
PHRF1-202ENST00000413872 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.63■□□□□ 0.25
PHRF1-202ENST00000413872 C15orf40Q8WUR7 153 aa16.63■□□□□ 0.25
PHRF1-202ENST00000413872 PIK3R3Q92569 461 aa16.63■□□□□ 0.25
PHRF1-202ENST00000413872 ADAD1Q96M93 576 aaKnown RBP16.63■□□□□ 0.25
PHRF1-202ENST00000413872 CLSTN3Q9BQT9 956 aa16.63■□□□□ 0.25
PHRF1-202ENST00000413872 LINC00597Q9H2U6 94 aa16.63■□□□□ 0.25
PHRF1-202ENST00000413872 LMAN1LQ9HAT1 526 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms