RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 H0YIV9 168 aa9.49□□□□□ -0.89
TMEM248-202ENST00000413593 OR7A17O14581 309 aa9.49□□□□□ -0.89
TMEM248-202ENST00000413593 SLC28A2O43868 658 aa9.49□□□□□ -0.89
TMEM248-202ENST00000413593 KLHL41O60662 606 aa9.49□□□□□ -0.89
TMEM248-202ENST00000413593 CDH16O75309 829 aa9.49□□□□□ -0.89
TMEM248-202ENST00000413593 ALPPP05187 535 aa9.49□□□□□ -0.89
TMEM248-202ENST00000413593 GSTA1P08263 222 aa9.49□□□□□ -0.89
TMEM248-202ENST00000413593 RPS17P08708 135 aaKnown RBP9.49□□□□□ -0.89
TMEM248-202ENST00000413593 NUDT17P0C025 328 aa9.49□□□□□ -0.89
TMEM248-202ENST00000413593 PCNAP12004 261 aa9.49□□□□□ -0.89
TMEM248-202ENST00000413593 RNH1P13489 461 aaKnown RBP9.49□□□□□ -0.89
TMEM248-202ENST00000413593 ZNF10P21506 573 aaPredicted RBP9.49□□□□□ -0.89
TMEM248-202ENST00000413593 JAK1P23458 1154 aa9.49□□□□□ -0.89
TMEM248-202ENST00000413593 PIK3CBP42338 1070 aa9.49□□□□□ -0.89
TMEM248-202ENST00000413593 TGM3Q08188 693 aa9.49□□□□□ -0.89
TMEM248-202ENST00000413593 TRAF3Q13114 568 aa9.49□□□□□ -0.89
TMEM248-202ENST00000413593 RUNX2Q13950 521 aa9.49□□□□□ -0.89
TMEM248-202ENST00000413593 PCOLCEQ15113 449 aa9.49□□□□□ -0.89
TMEM248-202ENST00000413593 LANCL3Q6ZV70 420 aa9.49□□□□□ -0.89
TMEM248-202ENST00000413593 SH2D5Q6ZV89 423 aa9.49□□□□□ -0.89
TMEM248-202ENST00000413593 PRICKLE2Q7Z3G6 844 aa9.49□□□□□ -0.89
TMEM248-202ENST00000413593 CPEB2Q7Z5Q1 589 aaKnown RBP9.49□□□□□ -0.89
TMEM248-202ENST00000413593 UBE3DQ7Z6J8 389 aa9.49□□□□□ -0.89
TMEM248-202ENST00000413593 ANKRD37Q7Z713 158 aa9.49□□□□□ -0.89
TMEM248-202ENST00000413593 PLPP5Q8NEB5 264 aa9.49□□□□□ -0.89
TMEM248-202ENST00000413593 OR52B6Q8NGF0 335 aa9.49□□□□□ -0.89
TMEM248-202ENST00000413593 OR2W6PQ8NHA6 318 aa9.49□□□□□ -0.89
TMEM248-202ENST00000413593 HUS1BQ8NHY5 278 aa9.49□□□□□ -0.89
TMEM248-202ENST00000413593 CAVIN3Q969G5 261 aa9.49□□□□□ -0.89
TMEM248-202ENST00000413593 NPLQ9BXD5 320 aaPredicted RBP9.49□□□□□ -0.89
TMEM248-202ENST00000413593 C1QTNF3Q9BXJ4 246 aa9.49□□□□□ -0.89
TMEM248-202ENST00000413593 PARD6BQ9BYG5 372 aa9.49□□□□□ -0.89
TMEM248-202ENST00000413593 LHPPQ9H008 270 aa9.49□□□□□ -0.89
TMEM248-202ENST00000413593 ZNF700Q9H0M5 742 aa9.49□□□□□ -0.89
TMEM248-202ENST00000413593 NOL11Q9H8H0 719 aaKnown RBP9.49□□□□□ -0.89
TMEM248-202ENST00000413593 PRDM7Q9NQW5 492 aa9.49□□□□□ -0.89
TMEM248-202ENST00000413593 RIC8BQ9NVN3 520 aa9.49□□□□□ -0.89
TMEM248-202ENST00000413593 C5AR2Q9P296 337 aa9.49□□□□□ -0.89
TMEM248-202ENST00000413593 C19orf25Q9UFG5 118 aaPredicted RBP9.49□□□□□ -0.89
TMEM248-202ENST00000413593 ADGRE2Q9UHX3 823 aa9.49□□□□□ -0.89
TMEM248-202ENST00000413593 ANAPC2Q9UJX6 822 aa9.49□□□□□ -0.89
TMEM248-202ENST00000413593 RNF11Q9Y3C5 154 aa9.49□□□□□ -0.89
TMEM248-202ENST00000413593 PCDHGA11Q9Y5H2 935 aa9.49□□□□□ -0.89
TMEM248-202ENST00000413593 FASNP49327 2511 aaKnown RBP9.49□□□□□ -0.89
TMEM248-202ENST00000413593 MDC1Q14676 2089 aaKnown RBP9.49□□□□□ -0.89
TMEM248-202ENST00000413593 IGHV3-20A0A0C4DH32 117 aa9.48□□□□□ -0.89
TMEM248-202ENST00000413593 MAGEB17A8MXT2 336 aa9.48□□□□□ -0.89
TMEM248-202ENST00000413593 FAM227AF5H4B4 570 aa9.48□□□□□ -0.89
TMEM248-202ENST00000413593 PSMD12O00232 456 aaPredicted RBP9.48□□□□□ -0.89
TMEM248-202ENST00000413593 B3GALT2O43825 422 aa9.48□□□□□ -0.89
TMEM248-202ENST00000413593 DLX3O60479 287 aa9.48□□□□□ -0.89
TMEM248-202ENST00000413593 B4GALT2O60909 372 aa9.48□□□□□ -0.89
TMEM248-202ENST00000413593 GLRA3O75311 464 aa9.48□□□□□ -0.89
TMEM248-202ENST00000413593 SH3BGRLO75368 114 aa9.48□□□□□ -0.89
TMEM248-202ENST00000413593 CLDN9O95484 217 aa9.48□□□□□ -0.89
TMEM248-202ENST00000413593 TGFB1P01137 390 aa9.48□□□□□ -0.89
TMEM248-202ENST00000413593 SERPINA7P05543 415 aa9.48□□□□□ -0.89
TMEM248-202ENST00000413593 PRR35P0CG20 571 aa9.48□□□□□ -0.89
TMEM248-202ENST00000413593 PLA2G2AP14555 144 aa9.48□□□□□ -0.89
TMEM248-202ENST00000413593 KRT15P19012 456 aa9.48□□□□□ -0.89
TMEM248-202ENST00000413593 TAC1P20366 129 aa9.48□□□□□ -0.89
TMEM248-202ENST00000413593 CERS1P27544 350 aa9.48□□□□□ -0.89
TMEM248-202ENST00000413593 CASRP41180 1078 aa9.48□□□□□ -0.89
TMEM248-202ENST00000413593 CCNG1P51959 295 aa9.48□□□□□ -0.89
TMEM248-202ENST00000413593 MTTPP55157 894 aa9.48□□□□□ -0.89
TMEM248-202ENST00000413593 HERVK_113P63132 956 aa9.48□□□□□ -0.89
TMEM248-202ENST00000413593 DDX39BQ13838 428 aaKnown RBP9.48□□□□□ -0.89
TMEM248-202ENST00000413593 ABRAXAS2Q15018 415 aa9.48□□□□□ -0.89
TMEM248-202ENST00000413593 ZRSR2Q15696 482 aaKnown RBP9.48□□□□□ -0.89
TMEM248-202ENST00000413593 NSDHLQ15738 373 aa9.48□□□□□ -0.89
TMEM248-202ENST00000413593 CPSF6Q16630 551 aaKnown RBP eCLIP9.48□□□□□ -0.89
TMEM248-202ENST00000413593 TMEM35AQ53FP2 167 aa9.48□□□□□ -0.89
TMEM248-202ENST00000413593 COLEC12Q5KU26 742 aa9.48□□□□□ -0.89
TMEM248-202ENST00000413593 DEPDC1Q5TB30 811 aa9.48□□□□□ -0.89
TMEM248-202ENST00000413593 IRAK1BP1Q5VVH5 260 aa9.48□□□□□ -0.89
TMEM248-202ENST00000413593 KHDRBS2Q5VWX1 349 aaKnown RBP9.48□□□□□ -0.89
TMEM248-202ENST00000413593 ZNF793Q6ZN11 406 aa9.48□□□□□ -0.89
TMEM248-202ENST00000413593 ATG14Q6ZNE5 492 aa9.48□□□□□ -0.89
TMEM248-202ENST00000413593 QSOX2Q6ZRP7 698 aa9.48□□□□□ -0.89
TMEM248-202ENST00000413593 CHSY3Q70JA7 882 aa9.48□□□□□ -0.89
TMEM248-202ENST00000413593 RPS27LQ71UM5 84 aaKnown RBP9.48□□□□□ -0.89
TMEM248-202ENST00000413593 HPS6Q86YV9 775 aa9.48□□□□□ -0.89
TMEM248-202ENST00000413593 KBTBD2Q8IY47 623 aa9.48□□□□□ -0.89
TMEM248-202ENST00000413593 RNF175Q8N4F7 328 aa9.48□□□□□ -0.89
TMEM248-202ENST00000413593 TEX19Q8NA77 164 aa9.48□□□□□ -0.89
TMEM248-202ENST00000413593 SRFBP1Q8NEF9 429 aaKnown RBP9.48□□□□□ -0.89
TMEM248-202ENST00000413593 ZNF483Q8TF39 744 aaPredicted RBP9.48□□□□□ -0.89
TMEM248-202ENST00000413593 TSLPQ969D9 159 aa9.48□□□□□ -0.89
TMEM248-202ENST00000413593 ATP6V1E2Q96A05 226 aa9.48□□□□□ -0.89
TMEM248-202ENST00000413593 REPS1Q96D71 796 aa9.48□□□□□ -0.89
TMEM248-202ENST00000413593 CMTM7Q96FZ5 175 aa9.48□□□□□ -0.89
TMEM248-202ENST00000413593 THOC3Q96J01 351 aaKnown RBP9.48□□□□□ -0.89
TMEM248-202ENST00000413593 IMMP1LQ96LU5 166 aa9.48□□□□□ -0.89
TMEM248-202ENST00000413593 KCNC2Q96PR1 638 aa9.48□□□□□ -0.89
TMEM248-202ENST00000413593 CDK15Q96Q40 435 aa9.48□□□□□ -0.89
TMEM248-202ENST00000413593 SERINC2Q96SA4 455 aa9.48□□□□□ -0.89
TMEM248-202ENST00000413593 MTERF1Q99551 399 aaKnown RBP9.48□□□□□ -0.89
TMEM248-202ENST00000413593 WDR77Q9BQA1 342 aaPredicted RBP9.48□□□□□ -0.89
TMEM248-202ENST00000413593 TBCDQ9BTW9 1192 aa9.48□□□□□ -0.89
TMEM248-202ENST00000413593 TUBB6Q9BUF5 446 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms